RNA–Protein interactions for RNA: ENST00000422748.5

CALD1-205, Transcript of caldesmon 1, humanhuman

TSL 2 BASIC

Gene CALD1, Length 2,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-205ENST00000422748 FCHO2Q0JRZ9 810 aa13.1□□□□□ -0.31
CALD1-205ENST00000422748 CDK5R2Q13319 367 aa13.1□□□□□ -0.31
CALD1-205ENST00000422748 SYT6Q5T7P8 510 aaPredicted RBP13.1□□□□□ -0.31
CALD1-205ENST00000422748 ZNF470Q6ECI4 717 aa13.1□□□□□ -0.31
CALD1-205ENST00000422748 CES5AQ6NT32 575 aa13.1□□□□□ -0.31
CALD1-205ENST00000422748 SLC51BQ86UW2 128 aa13.1□□□□□ -0.31
CALD1-205ENST00000422748 FAM109AQ8N4B1 249 aa13.1□□□□□ -0.31
CALD1-205ENST00000422748 ZNF280CQ8ND82 737 aa13.1□□□□□ -0.31
CALD1-205ENST00000422748 LPAR1Q92633 364 aa13.1□□□□□ -0.31
CALD1-205ENST00000422748 RDH12Q96NR8 316 aa13.1□□□□□ -0.31
CALD1-205ENST00000422748 AS3MTQ9HBK9 375 aa13.1□□□□□ -0.31
CALD1-205ENST00000422748 CHST12Q9NRB3 414 aa13.1□□□□□ -0.31
CALD1-205ENST00000422748 DCAF16Q9NXF7 216 aa13.1□□□□□ -0.31
CALD1-205ENST00000422748 AASSQ9UDR5 926 aa13.1□□□□□ -0.31
CALD1-205ENST00000422748 SIX4Q9UIU6 781 aa13.1□□□□□ -0.31
CALD1-205ENST00000422748 SRCAPQ6ZRS2 3230 aa13.1□□□□□ -0.31
CALD1-205ENST00000422748 ANKRD12Q6UB98 2062 aa13.09□□□□□ -0.31
CALD1-205ENST00000422748 MGAMO43451 1857 aa13.09□□□□□ -0.31
CALD1-205ENST00000422748 MEN1O00255 615 aa13.09□□□□□ -0.31
CALD1-205ENST00000422748 PRMT5O14744 637 aaPredicted RBP13.09□□□□□ -0.31
CALD1-205ENST00000422748 SEMA3DO95025 777 aa13.09□□□□□ -0.31
CALD1-205ENST00000422748 FADS2O95864 444 aaKnown RBP13.09□□□□□ -0.31
CALD1-205ENST00000422748 APOA1P02647 267 aa13.09□□□□□ -0.31
CALD1-205ENST00000422748 ARL2P36404 184 aa13.09□□□□□ -0.31
CALD1-205ENST00000422748 ST13P50502 369 aaKnown RBP13.09□□□□□ -0.31
CALD1-205ENST00000422748 TAS2R39P59534 338 aa13.09□□□□□ -0.31
CALD1-205ENST00000422748 GHRHRQ02643 423 aa13.09□□□□□ -0.31
CALD1-205ENST00000422748 SIM2Q14190 667 aaPredicted RBP13.09□□□□□ -0.31
CALD1-205ENST00000422748 SPATS1Q496A3 300 aa13.09□□□□□ -0.31
CALD1-205ENST00000422748 TPRG1LQ5T0D9 272 aa13.09□□□□□ -0.31
CALD1-205ENST00000422748 ZNF691Q5VV52 312 aa13.09□□□□□ -0.31
CALD1-205ENST00000422748 GLYATQ6IB77 296 aa13.09□□□□□ -0.31
CALD1-205ENST00000422748 SDE2Q6IQ49 451 aa13.09□□□□□ -0.31
CALD1-205ENST00000422748 NSMCE2Q96MF7 247 aa13.09□□□□□ -0.31
CALD1-205ENST00000422748 SGIP1Q9BQI5 828 aa13.09□□□□□ -0.31
CALD1-205ENST00000422748 GSTO2Q9H4Y5 243 aa13.09□□□□□ -0.31
CALD1-205ENST00000422748 KAT8Q9H7Z6 458 aaKnown RBP13.09□□□□□ -0.31
CALD1-205ENST00000422748 SLC52A3Q9NQ40 469 aa13.09□□□□□ -0.31
CALD1-205ENST00000422748 SLAMF8Q9P0V8 285 aa13.09□□□□□ -0.31
CALD1-205ENST00000422748 CPSF3Q9UKF6 684 aaKnown RBP13.09□□□□□ -0.31
CALD1-205ENST00000422748 DSEQ9UL01 958 aa13.09□□□□□ -0.31
CALD1-205ENST00000422748 SNX6Q9UNH7 406 aa13.09□□□□□ -0.31
CALD1-205ENST00000422748 ZNF638Q14966 1978 aaKnown RBP13.09□□□□□ -0.31
CALD1-205ENST00000422748 FAM92AA1XBS5 289 aa13.09□□□□□ -0.31
CALD1-205ENST00000422748 FAM25AB3EWG3 89 aa13.09□□□□□ -0.31
CALD1-205ENST00000422748 FAM25CB3EWG5 89 aa13.09□□□□□ -0.31
CALD1-205ENST00000422748 FAM25GB3EWG6 89 aa13.09□□□□□ -0.31
CALD1-205ENST00000422748 ANGPTL1O95841 491 aa13.09□□□□□ -0.31
CALD1-205ENST00000422748 FMO3P31513 532 aa13.09□□□□□ -0.31
CALD1-205ENST00000422748 ARL4AP40617 200 aa13.09□□□□□ -0.31
CALD1-205ENST00000422748 CASP2P42575 452 aa13.09□□□□□ -0.31
CALD1-205ENST00000422748 PPP1R8Q12972 351 aaKnown RBP13.09□□□□□ -0.31
CALD1-205ENST00000422748 KRR1Q13601 381 aaKnown RBP13.09□□□□□ -0.31
CALD1-205ENST00000422748 CAPSQ13938 189 aa13.09□□□□□ -0.31
CALD1-205ENST00000422748 TRIP4Q15650 581 aaPredicted RBP13.09□□□□□ -0.31
CALD1-205ENST00000422748 TECRLQ5HYJ1 363 aa13.09□□□□□ -0.31
CALD1-205ENST00000422748 PAGE3Q5JUK9 113 aa13.09□□□□□ -0.31
CALD1-205ENST00000422748 SULT1C3Q6IMI6 304 aa13.09□□□□□ -0.31
CALD1-205ENST00000422748 PRR23CQ6ZRP0 262 aa13.09□□□□□ -0.31
CALD1-205ENST00000422748 C12orf29Q8N999 325 aa13.09□□□□□ -0.31
CALD1-205ENST00000422748 PJA1Q8NG27 643 aa13.09□□□□□ -0.31
CALD1-205ENST00000422748 ITCHQ96J02 903 aa13.09□□□□□ -0.31
CALD1-205ENST00000422748 RNF170Q96K19 258 aa13.09□□□□□ -0.31
CALD1-205ENST00000422748 C12orf10Q9HB07 376 aa13.09□□□□□ -0.31
CALD1-205ENST00000422748 ATP13A2Q9NQ11 1180 aa13.09□□□□□ -0.31
CALD1-205ENST00000422748 NSMCE4AQ9NXX6 385 aa13.09□□□□□ -0.31
CALD1-205ENST00000422748 GTF2IRD1Q9UHL9 959 aa13.09□□□□□ -0.31
CALD1-205ENST00000422748 DNMT3LQ9UJW3 386 aa13.09□□□□□ -0.31
CALD1-205ENST00000422748 FEM1BQ9UK73 627 aa13.09□□□□□ -0.31
CALD1-205ENST00000422748 INVSQ9Y283 1065 aa13.09□□□□□ -0.31
CALD1-205ENST00000422748 ASPDHA6ND91 283 aa13.08□□□□□ -0.31
CALD1-205ENST00000422748 PRSS47A8MTI9 375 aa13.08□□□□□ -0.31
CALD1-205ENST00000422748 GAS2O43903 313 aaKnown RBP13.08□□□□□ -0.31
CALD1-205ENST00000422748 SLC4A1P02730 911 aa13.08□□□□□ -0.31
CALD1-205ENST00000422748 CD36P16671 472 aa13.08□□□□□ -0.31
CALD1-205ENST00000422748 POLR2CP19387 275 aaPredicted RBP13.08□□□□□ -0.31
CALD1-205ENST00000422748 DEFA1P59665 94 aa13.08□□□□□ -0.31
CALD1-205ENST00000422748 DEFA3P59666 94 aa13.08□□□□□ -0.31
CALD1-205ENST00000422748 IL5RAQ01344 420 aa13.08□□□□□ -0.31
CALD1-205ENST00000422748 EPS8Q12929 822 aa13.08□□□□□ -0.31
CALD1-205ENST00000422748 LAPTM5Q13571 262 aa13.08□□□□□ -0.31
CALD1-205ENST00000422748 TBRG1Q3YBR2 411 aa13.08□□□□□ -0.31
CALD1-205ENST00000422748 TRAF7Q6Q0C0 670 aa13.08□□□□□ -0.31
CALD1-205ENST00000422748 ZFPM2Q8WW38 1151 aa13.08□□□□□ -0.31
CALD1-205ENST00000422748 TTC9Q92623 222 aa13.08□□□□□ -0.31
CALD1-205ENST00000422748 ASB2Q96Q27 587 aa13.08□□□□□ -0.31
CALD1-205ENST00000422748 RHNO1Q9BSD3 238 aa13.08□□□□□ -0.31
CALD1-205ENST00000422748 MLPHQ9BV36 600 aaPredicted RBP13.08□□□□□ -0.31
CALD1-205ENST00000422748 PXMP2Q9NR77 195 aa13.08□□□□□ -0.31
CALD1-205ENST00000422748 AASDHPPTQ9NRN7 309 aa13.08□□□□□ -0.31
CALD1-205ENST00000422748 TOR4AQ9NXH8 423 aa13.08□□□□□ -0.31
CALD1-205ENST00000422748 FBXO10Q9UK96 956 aa13.08□□□□□ -0.31
CALD1-205ENST00000422748 CNTNAP1P78357 1384 aa13.08□□□□□ -0.32
CALD1-205ENST00000422748 LINC00854A0A1B0GVQ3 168 aa13.08□□□□□ -0.32
CALD1-205ENST00000422748 A0A1W2PQ72 361 aa13.08□□□□□ -0.32
CALD1-205ENST00000422748 MT-ND2P03891 347 aa13.08□□□□□ -0.32
CALD1-205ENST00000422748 RBP1P09455 135 aa13.08□□□□□ -0.32
CALD1-205ENST00000422748 TGFBR2P37173 567 aa13.08□□□□□ -0.32
CALD1-205ENST00000422748 EEFSECP57772 596 aaKnown RBP13.08□□□□□ -0.32
CALD1-205ENST00000422748 TYSND1Q2T9J0 566 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms