RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 CCHCR1Q8TD31 782 aa7.97□□□□□ -1.13
VIM-202ENST00000421459 RAPGEF5Q92565 580 aa7.97□□□□□ -1.13
VIM-202ENST00000421459 STAMBPL1Q96FJ0 436 aa7.97□□□□□ -1.13
VIM-202ENST00000421459 TSGA13Q96PP4 275 aa7.97□□□□□ -1.13
VIM-202ENST00000421459 TRIB3Q96RU7 358 aa7.97□□□□□ -1.13
VIM-202ENST00000421459 PACSIN1Q9BY11 444 aa7.97□□□□□ -1.13
VIM-202ENST00000421459 TWSG1Q9GZX9 223 aa7.97□□□□□ -1.13
VIM-202ENST00000421459 TRIT1Q9H3H1 467 aaKnown RBP7.97□□□□□ -1.13
VIM-202ENST00000421459 ZNF768Q9H5H4 540 aaKnown RBP7.97□□□□□ -1.13
VIM-202ENST00000421459 RMI1Q9H9A7 625 aa7.97□□□□□ -1.13
VIM-202ENST00000421459 ZFYVE1Q9HBF4 777 aa7.97□□□□□ -1.13
VIM-202ENST00000421459 TRIM39Q9HCM9 518 aa7.97□□□□□ -1.13
VIM-202ENST00000421459 UBP1Q9NZI7 540 aa7.97□□□□□ -1.13
VIM-202ENST00000421459 TMEM63CQ9P1W3 806 aa7.97□□□□□ -1.13
VIM-202ENST00000421459 RCOR3Q9P2K3 495 aaPredicted RBP7.97□□□□□ -1.13
VIM-202ENST00000421459 KCTD3Q9Y597 815 aa7.97□□□□□ -1.13
VIM-202ENST00000421459 PCDHB3Q9Y5E6 796 aa7.97□□□□□ -1.13
VIM-202ENST00000421459 SPO11Q9Y5K1 396 aa7.97□□□□□ -1.13
VIM-202ENST00000421459 TEX15Q9BXT5 2789 aa7.97□□□□□ -1.13
VIM-202ENST00000421459 PTPN13Q12923 2485 aa7.96□□□□□ -1.13
VIM-202ENST00000421459 SPTA1P02549 2419 aa7.96□□□□□ -1.14
VIM-202ENST00000421459 OR5K4A6NMS3 321 aa7.96□□□□□ -1.14
VIM-202ENST00000421459 F5H423 210 aaPredicted RBP7.96□□□□□ -1.14
VIM-202ENST00000421459 MKRN2OSH3BPM6 223 aa7.96□□□□□ -1.14
VIM-202ENST00000421459 MYO1FO00160 1098 aa7.96□□□□□ -1.14
VIM-202ENST00000421459 CHUKO15111 745 aa7.96□□□□□ -1.14
VIM-202ENST00000421459 UGT1A9O60656 530 aa7.96□□□□□ -1.14
VIM-202ENST00000421459 CREG1O75629 220 aa7.96□□□□□ -1.14
VIM-202ENST00000421459 FGF5P12034 268 aa7.96□□□□□ -1.14
VIM-202ENST00000421459 BPIP17213 487 aa7.96□□□□□ -1.14
VIM-202ENST00000421459 UGT1A6P19224 532 aa7.96□□□□□ -1.14
VIM-202ENST00000421459 UGT1A1P22309 533 aa7.96□□□□□ -1.14
VIM-202ENST00000421459 UGT1A4P22310 534 aa7.96□□□□□ -1.14
VIM-202ENST00000421459 CES1P23141 567 aa7.96□□□□□ -1.14
VIM-202ENST00000421459 CD97P48960 835 aa7.96□□□□□ -1.14
VIM-202ENST00000421459 CLCNKAP51800 687 aa7.96□□□□□ -1.14
VIM-202ENST00000421459 RPL26P61254 145 aaKnown RBP7.96□□□□□ -1.14
VIM-202ENST00000421459 MAP7Q14244 749 aa7.96□□□□□ -1.14
VIM-202ENST00000421459 NADK2Q4G0N4 442 aa7.96□□□□□ -1.14
VIM-202ENST00000421459 FILIP1LQ4L180 1135 aa7.96□□□□□ -1.14
VIM-202ENST00000421459 ATP13A5Q4VNC0 1218 aa7.96□□□□□ -1.14
VIM-202ENST00000421459 CCDC183Q5T5S1 534 aa7.96□□□□□ -1.14
VIM-202ENST00000421459 PRAMEF17Q5VTA0 474 aa7.96□□□□□ -1.14
VIM-202ENST00000421459 LCN10Q6JVE6 187 aa7.96□□□□□ -1.14
VIM-202ENST00000421459 PWWP2BQ6NUJ5 590 aa7.96□□□□□ -1.14
VIM-202ENST00000421459 TCTN3Q6NUS6 607 aa7.96□□□□□ -1.14
VIM-202ENST00000421459 FBXO38Q6PIJ6 1188 aa7.96□□□□□ -1.14
VIM-202ENST00000421459 FAM83HQ6ZRV2 1179 aaPredicted RBP7.96□□□□□ -1.14
VIM-202ENST00000421459 TMC3Q7Z5M5 1100 aa7.96□□□□□ -1.14
VIM-202ENST00000421459 C11orf96Q7Z7L8 435 aa7.96□□□□□ -1.14
VIM-202ENST00000421459 GPR150Q8NGU9 434 aa7.96□□□□□ -1.14
VIM-202ENST00000421459 KLHL6Q8WZ60 621 aa7.96□□□□□ -1.14
VIM-202ENST00000421459 GLYATL1Q969I3 302 aa7.96□□□□□ -1.14
VIM-202ENST00000421459 FAF2Q96CS3 445 aa7.96□□□□□ -1.14
VIM-202ENST00000421459 AGAP3Q96P47 875 aa7.96□□□□□ -1.14
VIM-202ENST00000421459 UGT1A7Q9HAW7 530 aa7.96□□□□□ -1.14
VIM-202ENST00000421459 UGT1A10Q9HAW8 530 aa7.96□□□□□ -1.14
VIM-202ENST00000421459 UGT1A8Q9HAW9 530 aa7.96□□□□□ -1.14
VIM-202ENST00000421459 LRRC4CQ9HCJ2 640 aa7.96□□□□□ -1.14
VIM-202ENST00000421459 SLC40A1Q9NP59 571 aa7.96□□□□□ -1.14
VIM-202ENST00000421459 LHX9Q9NQ69 397 aa7.96□□□□□ -1.14
VIM-202ENST00000421459 LUZP4Q9P127 313 aa7.96□□□□□ -1.14
VIM-202ENST00000421459 DNPEPQ9ULA0 475 aa7.96□□□□□ -1.14
VIM-202ENST00000421459 PADI1Q9ULC6 663 aa7.96□□□□□ -1.14
VIM-202ENST00000421459 PSMD13Q9UNM6 376 aa7.96□□□□□ -1.14
VIM-202ENST00000421459 RPL26L1Q9UNX3 145 aaKnown RBP7.96□□□□□ -1.14
VIM-202ENST00000421459 POLHQ9Y253 713 aa7.96□□□□□ -1.14
VIM-202ENST00000421459 ZNF711Q9Y462 761 aa7.96□□□□□ -1.14
VIM-202ENST00000421459 HEY1Q9Y5J3 304 aa7.96□□□□□ -1.14
VIM-202ENST00000421459 RGSL1A5PLK6 1076 aa7.95□□□□□ -1.14
VIM-202ENST00000421459 ARGFXA6NJG6 315 aa7.95□□□□□ -1.14
VIM-202ENST00000421459 TTLL8A6PVC2 850 aa7.95□□□□□ -1.14
VIM-202ENST00000421459 KMOO15229 486 aa7.95□□□□□ -1.14
VIM-202ENST00000421459 BUD23O43709 281 aaKnown RBP7.95□□□□□ -1.14
VIM-202ENST00000421459 SEMA7AO75326 666 aa7.95□□□□□ -1.14
VIM-202ENST00000421459 RFPL1O75677 317 aa7.95□□□□□ -1.14
VIM-202ENST00000421459 MTA2O94776 668 aa7.95□□□□□ -1.14
VIM-202ENST00000421459 PROSCO94903 275 aa7.95□□□□□ -1.14
VIM-202ENST00000421459 CDK14O94921 469 aa7.95□□□□□ -1.14
VIM-202ENST00000421459 MT-CYBP00156 380 aaPredicted RBP7.95□□□□□ -1.14
VIM-202ENST00000421459 EBLN1P0CF75 366 aa7.95□□□□□ -1.14
VIM-202ENST00000421459 SLC2A4P14672 509 aa7.95□□□□□ -1.14
VIM-202ENST00000421459 NELFEP18615 380 aaKnown RBP7.95□□□□□ -1.14
VIM-202ENST00000421459 CA4P22748 312 aa7.95□□□□□ -1.14
VIM-202ENST00000421459 KDELR1P24390 212 aa7.95□□□□□ -1.14
VIM-202ENST00000421459 CASP14P31944 242 aa7.95□□□□□ -1.14
VIM-202ENST00000421459 NOP2P46087 812 aaKnown RBP7.95□□□□□ -1.14
VIM-202ENST00000421459 CAPZBP47756 277 aa7.95□□□□□ -1.14
VIM-202ENST00000421459 ARCN1P48444 511 aaKnown RBP7.95□□□□□ -1.14
VIM-202ENST00000421459 CCL11P51671 97 aa7.95□□□□□ -1.14
VIM-202ENST00000421459 CTSCP53634 463 aa7.95□□□□□ -1.14
VIM-202ENST00000421459 AP1B1Q10567 949 aa7.95□□□□□ -1.14
VIM-202ENST00000421459 TMEM115Q12893 351 aaPredicted RBP7.95□□□□□ -1.14
VIM-202ENST00000421459 DNASE1L3Q13609 305 aa7.95□□□□□ -1.14
VIM-202ENST00000421459 IL10RAQ13651 578 aa7.95□□□□□ -1.14
VIM-202ENST00000421459 IL11RAQ14626 422 aa7.95□□□□□ -1.14
VIM-202ENST00000421459 PTPRCAPQ14761 206 aa7.95□□□□□ -1.14
VIM-202ENST00000421459 LLGL1Q15334 1064 aa7.95□□□□□ -1.14
VIM-202ENST00000421459 HADHQ16836 314 aaKnown RBP7.95□□□□□ -1.14
VIM-202ENST00000421459 CRTC2Q53ET0 693 aaPredicted RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms