RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 DCUN1D2Q6PH85 259 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 DSTYKQ6XUX3 929 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 ZNF793Q6ZN11 406 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 MMS22LQ6ZRQ5 1243 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 MON1BQ7L1V2 547 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 CHST15Q7LFX5 561 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 C14orf80Q86SX3 495 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 ERICH1Q86X53 443 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 METTL23Q86XA0 190 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 PHF13Q86YI8 300 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 ADGRF2Q8IZF7 708 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 MCOLN2Q8IZK6 566 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 APPL2Q8NEU8 664 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 ZNF606Q8WXB4 792 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 C18orf25Q96B23 403 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 TNIP3Q96KP6 325 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 ZMAT2Q96NC0 199 aaKnown RBP3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 GAD1Q99259 594 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 ELOVL4Q9GZR5 314 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 MIS12Q9H081 205 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 SDCBP2Q9H190 292 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 TRPV6Q9H1D0 765 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 SLC25A32Q9H2D1 315 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 GOLPH3Q9H4A6 298 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 FAM124BQ9H5Z6 455 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 UBN1Q9NPG3 1134 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 ADAM22Q9P0K1 906 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 KLHL42Q9P2K6 505 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 RNF14Q9UBS8 474 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 HMGXB4Q9UGU5 601 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 LCMT1Q9UIC8 334 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 PADI3Q9ULW8 664 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 BARX2Q9UMQ3 279 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 PACSIN2Q9UNF0 486 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 CNTN6Q9UQ52 1028 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 SQORQ9Y6N5 450 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 LTBP2Q14767 1821 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 KIAA1671Q9BY89 1806 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 GRIN2DO15399 1336 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 ARL5CA6NH57 179 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 KPNA7A9QM74 516 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 F8W8V4 182 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 H3BNX3 289 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 GOLGA8SH3BPF8 625 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 PGRMC1O00264 195 aaKnown RBP3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 PODXLO00592 558 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 PIRO00625 290 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 CYB561D2O14569 222 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 PTGESO14684 152 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 INPPL1O15357 1258 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 CTIFO43310 598 aaKnown RBP3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 ERLIN1O75477 346 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 MTA2O94776 668 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 HRGP04196 525 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 CYP1A2P05177 515 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 RHOXF2BP0C7M4 288 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 SETSIPP0DME0 302 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 ODC1P11926 461 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 PRLRP16471 622 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 RHCEP18577 417 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 RRM1P23921 792 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 MCM3P25205 808 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 ADORA2BP29275 332 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 CDH5P33151 784 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 GALNSP34059 522 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 CETN2P41208 172 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 SNX16P57768 344 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 RPS13P62277 151 aaKnown RBP3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 RHDQ02161 417 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 RNASELQ05823 741 aaKnown RBP3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 GBX1Q14549 363 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 SMC1AQ14683 1233 aaKnown RBP3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 ZBTB6Q15916 424 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 C2CD6Q53TS8 623 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 XKR4Q5GH76 650 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 LCE1AQ5T7P2 110 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 CYP4A22Q5TCH4 519 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 C8orf74Q6P047 294 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 DENND1BQ6P3S1 775 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 FBXO46Q6PJ61 603 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 CTU1Q7Z7A3 348 aaKnown RBP3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 PHLDB2Q86SQ0 1253 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 ACOT1Q86TX2 421 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 NT5DC3Q86UY8 548 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 UNC93AQ86WB7 457 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 NLRC5Q86WI3 1866 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 ECHDC2Q86YB7 292 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 CCDC50Q8IVM0 306 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 LRRC57Q8N9N7 239 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 SLC4A11Q8NBS3 891 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 OLIG1Q8TAK6 271 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 NSMCE1Q8WV22 266 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 UBE2Q2Q8WVN8 375 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 SEPT8Q92599 483 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 APBB2Q92870 758 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 PRR11Q96HE9 360 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 VCPIP1Q96JH7 1222 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 MCEEQ96PE7 176 aa3.91□□□□□ -1.78
HMGB3P20-201ENST00000417997 PPP1R10Q96QC0 940 aaKnown RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms