RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 KRT73Q86Y46 540 aa6.02□□□□□ -1.45
NIFKP3-201ENST00000417799 ELMOD1Q8N336 334 aa6.02□□□□□ -1.45
NIFKP3-201ENST00000417799 ARHGAP18Q8N392 663 aa6.02□□□□□ -1.45
NIFKP3-201ENST00000417799 EMC1Q8N766 993 aa6.02□□□□□ -1.45
NIFKP3-201ENST00000417799 ANKRD42Q8N9B4 389 aa6.02□□□□□ -1.45
NIFKP3-201ENST00000417799 LRRC57Q8N9N7 239 aa6.02□□□□□ -1.45
NIFKP3-201ENST00000417799 STKLD1Q8NE28 680 aa6.02□□□□□ -1.45
NIFKP3-201ENST00000417799 JOSD2Q8TAC2 188 aa6.02□□□□□ -1.45
NIFKP3-201ENST00000417799 TMEM171Q8WVE6 324 aa6.02□□□□□ -1.45
NIFKP3-201ENST00000417799 RXFP2Q8WXD0 754 aa6.02□□□□□ -1.45
NIFKP3-201ENST00000417799 OVCA2Q8WZ82 227 aa6.02□□□□□ -1.45
NIFKP3-201ENST00000417799 GOLGA1Q92805 767 aa6.02□□□□□ -1.45
NIFKP3-201ENST00000417799 PSMG2Q969U7 264 aa6.02□□□□□ -1.45
NIFKP3-201ENST00000417799 FAM149B1Q96BN6 582 aa6.02□□□□□ -1.45
NIFKP3-201ENST00000417799 ALS2CR12Q96Q35 445 aa6.02□□□□□ -1.45
NIFKP3-201ENST00000417799 DDX23Q9BUQ8 820 aaKnown RBP6.02□□□□□ -1.45
NIFKP3-201ENST00000417799 TRIM62Q9BVG3 475 aa6.02□□□□□ -1.45
NIFKP3-201ENST00000417799 TRIM7Q9C029 511 aa6.02□□□□□ -1.45
NIFKP3-201ENST00000417799 PCDHAC1Q9H158 963 aa6.02□□□□□ -1.45
NIFKP3-201ENST00000417799 TTYH1Q9H313 450 aaPredicted RBP6.02□□□□□ -1.45
NIFKP3-201ENST00000417799 POPDC2Q9HBU9 364 aa6.02□□□□□ -1.45
NIFKP3-201ENST00000417799 ZBTB26Q9HCK0 441 aa6.02□□□□□ -1.45
NIFKP3-201ENST00000417799 OBP2BQ9NPH6 170 aa6.02□□□□□ -1.45
NIFKP3-201ENST00000417799 SLC2A4RGQ9NR83 387 aa6.02□□□□□ -1.45
NIFKP3-201ENST00000417799 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.02□□□□□ -1.45
NIFKP3-201ENST00000417799 UXTQ9UBK9 157 aaPredicted RBP6.02□□□□□ -1.45
NIFKP3-201ENST00000417799 TESQ9UGI8 421 aaKnown RBP6.02□□□□□ -1.45
NIFKP3-201ENST00000417799 ANAPC7Q9UJX3 599 aa6.02□□□□□ -1.45
NIFKP3-201ENST00000417799 PTPRDP23468 1912 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 GRID2IPA4D2P6 1211 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 TMEM110-MUSTN1A8MSY1 372 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 CAPN9O14815 690 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 PPM1DO15297 605 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 CD3EAPO15446 510 aaKnown RBP6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 CCL16O15467 120 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 ZNF500O60304 480 aaPredicted RBP6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 DAB1O75553 588 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 RFPL2O75678 378 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 PALMO75781 387 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 PROSCO94903 275 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 TUBB4AP04350 444 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 FYNP06241 537 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 HNRNPA1P09651 372 aaKnown RBP eCLIP6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 ZDHHC11BP0C7U3 371 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 RALAP11233 206 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 TYRP1P17643 537 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 EGR1P18146 543 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 GPD1P21695 349 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 PSMA2P25787 234 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 HOXA9P31269 272 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 SDC4P31431 198 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 MATKP42679 507 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 PTPN9P43378 593 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 PPP3CCP48454 512 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 PGFP49763 221 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 GNG11P61952 73 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 YWHAGP61981 247 aaKnown RBP eCLIP6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 OGDHQ02218 1023 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 SCAPQ12770 1279 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 FOXE3Q13461 319 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 KCNC3Q14003 757 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 CCNIQ14094 377 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 PIGHQ14442 188 aaPredicted RBP6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 MESDQ14696 234 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 MAPKAPK3Q16644 382 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 CCDC14Q49A88 953 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 DCAF6Q58WW2 860 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 TCEAL5Q5H9L2 206 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 ZNF569Q5MCW4 686 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 CERCAMQ5T4B2 595 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 DEPDC1Q5TB30 811 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 FAXCQ5TGI0 409 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 MANEALQ5VSG8 457 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 SNX30Q5VWJ9 437 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 SYPL2Q5VXT5 272 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 RAP1GAP2Q684P5 730 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 TRNP1Q6NT89 227 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 MRNIPQ6NTE8 343 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 C11orf63Q6NUN7 778 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 RHOUQ7L0Q8 258 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 SLFN11Q7Z7L1 901 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 SCD5Q86SK9 330 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 CCDC28AQ8IWP9 274 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 SYCE1Q8N0S2 351 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 DEFB106AQ8N104 65 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 VN1R2Q8NFZ6 395 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 TRIM58Q8NG06 486 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 CENPIQ92674 756 aaPredicted RBP6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 CASP10Q92851 521 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 FBXO32Q969P5 355 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 NT5C3BQ969T7 300 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 ZNF503Q96F45 646 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 SLITRK1Q96PX8 696 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 CNPY3Q9BT09 278 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 TLR8Q9NR97 1041 aaKnown RBP6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 ABCC13Q9NSE7 274 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 ZDHHC7Q9NXF8 308 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 RRN3Q9NYV6 651 aa6.01□□□□□ -1.45
NIFKP3-201ENST00000417799 CLIC5Q9NZA1 410 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms