RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 C9orf16Q9BUW7 83 aa14.35□□□□□ -0.11
HDAC9-208ENST00000417496 POPDC3Q9HBV1 291 aa14.35□□□□□ -0.11
HDAC9-208ENST00000417496 TIMMDC1Q9NPL8 285 aa14.35□□□□□ -0.11
HDAC9-208ENST00000417496 F5H5T6 163 aa14.34□□□□□ -0.11
HDAC9-208ENST00000417496 CBX4O00257 560 aa14.34□□□□□ -0.11
HDAC9-208ENST00000417496 ADAMTS4O75173 837 aa14.34□□□□□ -0.11
HDAC9-208ENST00000417496 KATNA1O75449 491 aa14.34□□□□□ -0.11
HDAC9-208ENST00000417496 RASAL1O95294 804 aa14.34□□□□□ -0.11
HDAC9-208ENST00000417496 VNN2O95498 520 aa14.34□□□□□ -0.11
HDAC9-208ENST00000417496 IGLV3-27P01718 113 aa14.34□□□□□ -0.11
HDAC9-208ENST00000417496 PRR35P0CG20 571 aa14.34□□□□□ -0.11
HDAC9-208ENST00000417496 HTR6P50406 440 aa14.34□□□□□ -0.11
HDAC9-208ENST00000417496 GATMP50440 423 aa14.34□□□□□ -0.11
HDAC9-208ENST00000417496 DGKQP52824 942 aa14.34□□□□□ -0.11
HDAC9-208ENST00000417496 MAPK10P53779 464 aa14.34□□□□□ -0.11
HDAC9-208ENST00000417496 MTPNP58546 118 aa14.34□□□□□ -0.11
HDAC9-208ENST00000417496 ERVPABLB-1P60509 514 aa14.34□□□□□ -0.11
HDAC9-208ENST00000417496 DCTN2Q13561 401 aaKnown RBP14.34□□□□□ -0.11
HDAC9-208ENST00000417496 SELPLGQ14242 412 aa14.34□□□□□ -0.11
HDAC9-208ENST00000417496 MBTPS1Q14703 1052 aa14.34□□□□□ -0.11
HDAC9-208ENST00000417496 CYBRD1Q53TN4 286 aa14.34□□□□□ -0.11
HDAC9-208ENST00000417496 ZRANB3Q5FWF4 1079 aa14.34□□□□□ -0.11
HDAC9-208ENST00000417496 CTSL3PQ5NE16 218 aa14.34□□□□□ -0.11
HDAC9-208ENST00000417496 TMEM214Q6NUQ4 689 aaKnown RBP14.34□□□□□ -0.11
HDAC9-208ENST00000417496 LINGO4Q6UY18 593 aa14.34□□□□□ -0.11
HDAC9-208ENST00000417496 TMEM199Q8N511 208 aa14.34□□□□□ -0.11
HDAC9-208ENST00000417496 LINC01599Q8WXQ3 324 aa14.34□□□□□ -0.11
HDAC9-208ENST00000417496 C12orf43Q96C57 262 aaKnown RBP14.34□□□□□ -0.11
HDAC9-208ENST00000417496 CINPQ9BW66 212 aaPredicted RBP14.34□□□□□ -0.11
HDAC9-208ENST00000417496 TRIM54Q9BYV2 358 aa14.34□□□□□ -0.11
HDAC9-208ENST00000417496 NAA50Q9GZZ1 169 aaKnown RBP14.34□□□□□ -0.11
HDAC9-208ENST00000417496 INTS10Q9NVR2 710 aaKnown RBP14.34□□□□□ -0.11
HDAC9-208ENST00000417496 MKI67P46013 3256 aaKnown RBP14.34□□□□□ -0.11
HDAC9-208ENST00000417496 PATJQ8NI35 1801 aa14.34□□□□□ -0.11
HDAC9-208ENST00000417496 A0A087WXM4 84 aa14.34□□□□□ -0.11
HDAC9-208ENST00000417496 E2F3O00716 465 aa14.34□□□□□ -0.11
HDAC9-208ENST00000417496 CCND3P30281 292 aaPredicted RBP14.34□□□□□ -0.11
HDAC9-208ENST00000417496 MC4RP32245 332 aa14.34□□□□□ -0.11
HDAC9-208ENST00000417496 CRHR2Q13324 411 aa14.34□□□□□ -0.11
HDAC9-208ENST00000417496 XKR7Q5GH72 579 aa14.34□□□□□ -0.11
HDAC9-208ENST00000417496 OGFOD2Q6N063 350 aa14.34□□□□□ -0.11
HDAC9-208ENST00000417496 LETMD1Q6P1Q0 360 aa14.34□□□□□ -0.11
HDAC9-208ENST00000417496 MGME1Q9BQP7 344 aa14.34□□□□□ -0.11
HDAC9-208ENST00000417496 CHID1Q9BWS9 393 aa14.34□□□□□ -0.11
HDAC9-208ENST00000417496 IL37Q9NZH6 218 aa14.34□□□□□ -0.11
HDAC9-208ENST00000417496 ANAPC2Q9UJX6 822 aa14.34□□□□□ -0.11
HDAC9-208ENST00000417496 PFDN1O60925 122 aa14.33□□□□□ -0.12
HDAC9-208ENST00000417496 UROSP10746 265 aa14.33□□□□□ -0.12
HDAC9-208ENST00000417496 ENTPD1P49961 510 aa14.33□□□□□ -0.12
HDAC9-208ENST00000417496 ADARP55265 1226 aaKnown RBP14.33□□□□□ -0.12
HDAC9-208ENST00000417496 TMED1Q13445 227 aa14.33□□□□□ -0.12
HDAC9-208ENST00000417496 GPR107Q5VW38 600 aa14.33□□□□□ -0.12
HDAC9-208ENST00000417496 SPRED1Q7Z699 444 aa14.33□□□□□ -0.12
HDAC9-208ENST00000417496 GPSM1Q86YR5 675 aa14.33□□□□□ -0.12
HDAC9-208ENST00000417496 DENND1CQ8IV53 801 aa14.33□□□□□ -0.12
HDAC9-208ENST00000417496 PEX13Q92968 403 aa14.33□□□□□ -0.12
HDAC9-208ENST00000417496 ABTB1Q969K4 478 aaPredicted RBP14.33□□□□□ -0.12
HDAC9-208ENST00000417496 FAM193BQ96PV7 902 aaPredicted RBP14.33□□□□□ -0.12
HDAC9-208ENST00000417496 NPLQ9BXD5 320 aaPredicted RBP14.33□□□□□ -0.12
HDAC9-208ENST00000417496 LTB4R2Q9NPC1 389 aa14.33□□□□□ -0.12
HDAC9-208ENST00000417496 TANC1Q9C0D5 1861 aa14.33□□□□□ -0.12
HDAC9-208ENST00000417496 FAM92AA1XBS5 289 aa14.33□□□□□ -0.12
HDAC9-208ENST00000417496 C2orf81A6NN90 581 aa14.33□□□□□ -0.12
HDAC9-208ENST00000417496 SYCE1LA8MT33 242 aa14.33□□□□□ -0.12
HDAC9-208ENST00000417496 INSIG1O15503 277 aa14.33□□□□□ -0.12
HDAC9-208ENST00000417496 EEDO75530 441 aaKnown RBP14.33□□□□□ -0.12
HDAC9-208ENST00000417496 RSL1D1O76021 490 aaKnown RBP14.33□□□□□ -0.12
HDAC9-208ENST00000417496 ATE1O95260 518 aa14.33□□□□□ -0.12
HDAC9-208ENST00000417496 GJB5O95377 273 aa14.33□□□□□ -0.12
HDAC9-208ENST00000417496 PRAMEF12O95522 483 aa14.33□□□□□ -0.12
HDAC9-208ENST00000417496 CHEK2O96017 543 aa14.33□□□□□ -0.12
HDAC9-208ENST00000417496 CNPP09543 421 aaKnown RBP14.33□□□□□ -0.12
HDAC9-208ENST00000417496 G6PDP11413 515 aa14.33□□□□□ -0.12
HDAC9-208ENST00000417496 PKMP14618 531 aaKnown RBP14.33□□□□□ -0.12
HDAC9-208ENST00000417496 HOXB8P17481 243 aaPredicted RBP14.33□□□□□ -0.12
HDAC9-208ENST00000417496 RPS9P46781 194 aaKnown RBP14.33□□□□□ -0.12
HDAC9-208ENST00000417496 MAPKAPK2P49137 400 aa14.33□□□□□ -0.12
HDAC9-208ENST00000417496 FLT3LGP49771 235 aa14.33□□□□□ -0.12
HDAC9-208ENST00000417496 ESRRGP62508 458 aa14.33□□□□□ -0.12
HDAC9-208ENST00000417496 KCTD21Q4G0X4 260 aa14.33□□□□□ -0.12
HDAC9-208ENST00000417496 TMTC4Q5T4D3 741 aa14.33□□□□□ -0.12
HDAC9-208ENST00000417496 AFTPHQ6ULP2 937 aa14.33□□□□□ -0.12
HDAC9-208ENST00000417496 GPRIN3Q6ZVF9 776 aa14.33□□□□□ -0.12
HDAC9-208ENST00000417496 C16orf59Q7L2K0 433 aa14.33□□□□□ -0.12
HDAC9-208ENST00000417496 TAS2R42Q7RTR8 314 aa14.33□□□□□ -0.12
HDAC9-208ENST00000417496 SPATA19Q7Z5L4 167 aa14.33□□□□□ -0.12
HDAC9-208ENST00000417496 SFRP1Q8N474 314 aa14.33□□□□□ -0.12
HDAC9-208ENST00000417496 PACRGLQ8N7B6 248 aa14.33□□□□□ -0.12
HDAC9-208ENST00000417496 CD200R1Q8TD46 325 aa14.33□□□□□ -0.12
HDAC9-208ENST00000417496 PSKH2Q96QS6 385 aa14.33□□□□□ -0.12
HDAC9-208ENST00000417496 CXorf21Q9HAI6 301 aa14.33□□□□□ -0.12
HDAC9-208ENST00000417496 GKN1Q9NS71 199 aa14.33□□□□□ -0.12
HDAC9-208ENST00000417496 SMPD3Q9NY59 655 aaPredicted RBP14.33□□□□□ -0.12
HDAC9-208ENST00000417496 HACD3Q9P035 362 aa14.33□□□□□ -0.12
HDAC9-208ENST00000417496 UBA2Q9UBT2 640 aaPredicted RBP14.33□□□□□ -0.12
HDAC9-208ENST00000417496 TRMT6Q9UJA5 497 aaKnown RBP14.33□□□□□ -0.12
HDAC9-208ENST00000417496 MTMR11A4FU01 709 aa14.32□□□□□ -0.12
HDAC9-208ENST00000417496 GIPC1O14908 333 aa14.32□□□□□ -0.12
HDAC9-208ENST00000417496 GPIP06744 558 aa14.32□□□□□ -0.12
HDAC9-208ENST00000417496 ITGB6P18564 788 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms