RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 SMARCD3Q6STE5 483 aa11.96□□□□□ -0.5
UBR4-205ENST00000417040 UNC5BQ8IZJ1 945 aa11.96□□□□□ -0.5
UBR4-205ENST00000417040 OR10G6Q8NH81 332 aa11.96□□□□□ -0.5
UBR4-205ENST00000417040 C1QTNF1Q9BXJ1 281 aa11.96□□□□□ -0.5
UBR4-205ENST00000417040 POLE4Q9NR33 117 aa11.96□□□□□ -0.5
UBR4-205ENST00000417040 SPEF1Q9Y4P9 236 aa11.96□□□□□ -0.5
UBR4-205ENST00000417040 UBIAD1Q9Y5Z9 338 aa11.96□□□□□ -0.5
UBR4-205ENST00000417040 PRLP01236 227 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 CKMT2P17540 419 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 AXLP30530 894 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 ZNF135P52742 658 aaPredicted RBP11.95□□□□□ -0.5
UBR4-205ENST00000417040 MBTD1Q05BQ5 628 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 CXCL9Q07325 125 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 DLG1Q12959 904 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 PPP1R8Q12972 351 aaKnown RBP11.95□□□□□ -0.5
UBR4-205ENST00000417040 SLC25A52Q3SY17 297 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 TAPT1Q6NXT6 567 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 TMPRSS11AQ6ZMR5 421 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 SLC22A16Q86VW1 577 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 ZNF567Q8N184 647 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 C17orf50Q8WW18 174 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 B3GALT6Q96L58 329 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 IPPKQ9H8X2 491 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 AMBNQ9NP70 447 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 SOHLH2Q9NX45 425 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 TTC24A2A3L6 582 aaPredicted RBP11.95□□□□□ -0.5
UBR4-205ENST00000417040 OR6C70A6NIJ9 312 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 GTPBP1O00178 669 aaKnown RBP11.95□□□□□ -0.5
UBR4-205ENST00000417040 OR4Q2P0C623 313 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 SPATA31D3P0C874 917 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 SMIM10L2AP0DMW4 78 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 SMIM10L2BP0DMW5 78 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 TPSB2P20231 275 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 SNRPD1P62314 119 aaKnown RBP11.95□□□□□ -0.5
UBR4-205ENST00000417040 OLR1P78380 273 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 GRB14Q14449 540 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 TPSAB1Q15661 275 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 BMT2Q1RMZ1 405 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 SPATA31D4Q6ZUB0 917 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 ANKRD23Q86SG2 305 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 XAGE5Q8WWM1 108 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 DUSP16Q9BY84 665 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 EHD1Q9H4M9 534 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 ATP13A3Q9H7F0 1226 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 SPATA31A5Q5VU36 1347 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 SPATA31A7Q8IWB4 1347 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 SLC25A12O75746 678 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 C4BPAP04003 597 aaKnown RBP11.95□□□□□ -0.5
UBR4-205ENST00000417040 PSMA1P25786 263 aaKnown RBP11.95□□□□□ -0.5
UBR4-205ENST00000417040 GPR153Q6NV75 609 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 CYP2S1Q96SQ9 504 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 MNTQ99583 582 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 EIF2B4Q9UI10 523 aaKnown RBP11.95□□□□□ -0.5
UBR4-205ENST00000417040 PCDHGA10Q9Y5H3 936 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 ZNF780BQ9Y6R6 833 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 WNT10BO00744 389 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 SCN2BO60939 215 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 RPP40O75818 363 aaKnown RBP11.95□□□□□ -0.5
UBR4-205ENST00000417040 TLX1P31314 330 aaPredicted RBP11.95□□□□□ -0.5
UBR4-205ENST00000417040 DGKEP52429 567 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 DEFA5Q01523 94 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 MC1RQ01726 317 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 CSTF1Q05048 431 aaKnown RBP11.95□□□□□ -0.5
UBR4-205ENST00000417040 SCN1BQ07699 218 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 ZBTB6Q15916 424 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 LINGO4Q6UY18 593 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 CNTD1Q8N815 330 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 TSEN15Q8WW01 171 aaKnown RBP11.95□□□□□ -0.5
UBR4-205ENST00000417040 MRPL17Q9NRX2 175 aaKnown RBP11.95□□□□□ -0.5
UBR4-205ENST00000417040 KANSL3Q9P2N6 904 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 SEC14L3Q9UDX4 400 aa11.95□□□□□ -0.5
UBR4-205ENST00000417040 CXCR6O00574 342 aa11.94□□□□□ -0.5
UBR4-205ENST00000417040 ITGB5P18084 799 aa11.94□□□□□ -0.5
UBR4-205ENST00000417040 BRCC3P46736 316 aa11.94□□□□□ -0.5
UBR4-205ENST00000417040 GNPDA1P46926 289 aa11.94□□□□□ -0.5
UBR4-205ENST00000417040 WDR4P57081 412 aaKnown RBP11.94□□□□□ -0.5
UBR4-205ENST00000417040 GMFBP60983 142 aa11.94□□□□□ -0.5
UBR4-205ENST00000417040 C2orf80Q0P641 193 aa11.94□□□□□ -0.5
UBR4-205ENST00000417040 MPPE1Q53F39 396 aa11.94□□□□□ -0.5
UBR4-205ENST00000417040 GCNT6Q5T4J0 391 aa11.94□□□□□ -0.5
UBR4-205ENST00000417040 TMEM110Q86TL2 294 aa11.94□□□□□ -0.5
UBR4-205ENST00000417040 SCAIQ8N9R8 606 aa11.94□□□□□ -0.5
UBR4-205ENST00000417040 ZFP28Q8NHY6 868 aa11.94□□□□□ -0.5
UBR4-205ENST00000417040 FAM110BQ8TC76 370 aa11.94□□□□□ -0.5
UBR4-205ENST00000417040 NKD1Q969G9 470 aa11.94□□□□□ -0.5
UBR4-205ENST00000417040 HSFY1Q96LI6 401 aa11.94□□□□□ -0.5
UBR4-205ENST00000417040 HSD17B14Q9BPX1 270 aa11.94□□□□□ -0.5
UBR4-205ENST00000417040 TTYH1Q9H313 450 aaPredicted RBP11.94□□□□□ -0.5
UBR4-205ENST00000417040 MYOCOSA0A1B0GUC4 107 aa11.94□□□□□ -0.5
UBR4-205ENST00000417040 SMIM30A4D0T7 59 aa11.94□□□□□ -0.5
UBR4-205ENST00000417040 ENPP3O14638 875 aa11.94□□□□□ -0.5
UBR4-205ENST00000417040 TEX28O15482 410 aa11.94□□□□□ -0.5
UBR4-205ENST00000417040 RPLP0P05388 317 aaKnown RBP11.94□□□□□ -0.5
UBR4-205ENST00000417040 ZNF12P17014 697 aa11.94□□□□□ -0.5
UBR4-205ENST00000417040 RAB27AP51159 221 aa11.94□□□□□ -0.5
UBR4-205ENST00000417040 ASB18Q6ZVZ8 466 aa11.94□□□□□ -0.5
UBR4-205ENST00000417040 USP30Q70CQ3 517 aa11.94□□□□□ -0.5
UBR4-205ENST00000417040 GBA3Q9H227 469 aa11.94□□□□□ -0.5
UBR4-205ENST00000417040 CTPS2Q9NRF8 586 aa11.94□□□□□ -0.5
UBR4-205ENST00000417040 SLC7A8Q9UHI5 535 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms