RNA–Protein interactions for RNA: ENST00000415030.6

SCN4B-202, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 4,480 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-202ENST00000415030 CDYL2Q8N8U2 506 aa11.5□□□□□ -0.57
SCN4B-202ENST00000415030 SMG8Q8ND04 991 aaKnown RBP11.5□□□□□ -0.57
SCN4B-202ENST00000415030 TBCDQ9BTW9 1192 aa11.5□□□□□ -0.57
SCN4B-202ENST00000415030 FUNDC2Q9BWH2 189 aa11.5□□□□□ -0.57
SCN4B-202ENST00000415030 LHPPQ9H008 270 aa11.5□□□□□ -0.57
SCN4B-202ENST00000415030 TOR3AQ9H497 397 aa11.5□□□□□ -0.57
SCN4B-202ENST00000415030 SOX17Q9H6I2 414 aaPredicted RBP11.5□□□□□ -0.57
SCN4B-202ENST00000415030 SDR39U1Q9NRG7 319 aaPredicted RBP11.5□□□□□ -0.57
SCN4B-202ENST00000415030 GTF2IRD1Q9UHL9 959 aa11.5□□□□□ -0.57
SCN4B-202ENST00000415030 RAPGEFL1Q9UHV5 662 aa11.5□□□□□ -0.57
SCN4B-202ENST00000415030 FAM50BQ9Y247 325 aa11.5□□□□□ -0.57
SCN4B-202ENST00000415030 ST14Q9Y5Y6 855 aa11.5□□□□□ -0.57
SCN4B-202ENST00000415030 MYO18AQ92614 2054 aaKnown RBP11.5□□□□□ -0.57
SCN4B-202ENST00000415030 ELOVL7A1L3X0 281 aa11.5□□□□□ -0.57
SCN4B-202ENST00000415030 ISPDA4D126 451 aa11.5□□□□□ -0.57
SCN4B-202ENST00000415030 ZNF682O95780 498 aa11.5□□□□□ -0.57
SCN4B-202ENST00000415030 FGF1P05230 155 aa11.5□□□□□ -0.57
SCN4B-202ENST00000415030 FGF4P08620 206 aa11.5□□□□□ -0.57
SCN4B-202ENST00000415030 IL7RP16871 459 aa11.5□□□□□ -0.57
SCN4B-202ENST00000415030 HLA-DPA1P20036 260 aa11.5□□□□□ -0.57
SCN4B-202ENST00000415030 RPL10P27635 214 aaKnown RBP11.5□□□□□ -0.57
SCN4B-202ENST00000415030 PGGT1BP53609 377 aa11.5□□□□□ -0.57
SCN4B-202ENST00000415030 UNC50Q53HI1 259 aa11.5□□□□□ -0.57
SCN4B-202ENST00000415030 LINC00299Q6ZSB3 139 aa11.5□□□□□ -0.57
SCN4B-202ENST00000415030 TRIM69Q86WT6 500 aa11.5□□□□□ -0.57
SCN4B-202ENST00000415030 SYTL1Q8IYJ3 562 aa11.5□□□□□ -0.57
SCN4B-202ENST00000415030 TMEM132CQ8N3T6 1108 aa11.5□□□□□ -0.57
SCN4B-202ENST00000415030 TMEM199Q8N511 208 aa11.5□□□□□ -0.57
SCN4B-202ENST00000415030 GANCQ8TET4 914 aa11.5□□□□□ -0.57
SCN4B-202ENST00000415030 PPP1R13LQ8WUF5 828 aa11.5□□□□□ -0.57
SCN4B-202ENST00000415030 HTRA1Q92743 480 aa11.5□□□□□ -0.57
SCN4B-202ENST00000415030 SH3YL1Q96HL8 342 aaPredicted RBP11.5□□□□□ -0.57
SCN4B-202ENST00000415030 REXO4Q9GZR2 422 aaKnown RBP11.5□□□□□ -0.57
SCN4B-202ENST00000415030 ZNF112Q9UJU3 913 aa11.5□□□□□ -0.57
SCN4B-202ENST00000415030 SMCHD1A6NHR9 2005 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 RBM47A0AV96 593 aaKnown RBP11.49□□□□□ -0.57
SCN4B-202ENST00000415030 FAM72CH0Y354 149 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 GPR182O15218 404 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 B3GAT3O94766 335 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 CAPN3P20807 821 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 FMO4P31512 558 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 GRK4P32298 578 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 PITX1P78337 314 aaPredicted RBP11.49□□□□□ -0.57
SCN4B-202ENST00000415030 FAM72AQ5TYM5 149 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 FAM72DQ6L9T8 149 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 SCIMPQ6UWF3 145 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 FAM72BQ86X60 149 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 OR4L1Q8NH43 312 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 TEPSINQ96N21 525 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 CORO1BQ9BR76 489 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 POLR1EQ9GZS1 481 aaKnown RBP11.49□□□□□ -0.57
SCN4B-202ENST00000415030 GSTO2Q9H4Y5 243 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 NECTIN3Q9NQS3 549 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 PCDHB3Q9Y5E6 796 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 SOBPA7XYQ1 873 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 PRRG1O14668 218 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 EEDO75530 441 aaKnown RBP11.49□□□□□ -0.57
SCN4B-202ENST00000415030 CDK14O94921 469 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 ARIH2O95376 493 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 IGFBP5P24593 272 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 OPRL1P41146 370 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 ZNF280AP59817 542 aaPredicted RBP11.49□□□□□ -0.57
SCN4B-202ENST00000415030 DMC1Q14565 340 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 TIMM50Q3ZCQ8 353 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 TP53INP2Q8IXH6 220 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 FCRL2Q96LA5 508 aaPredicted RBP11.49□□□□□ -0.57
SCN4B-202ENST00000415030 C11orf84Q9BUA3 381 aaPredicted RBP11.49□□□□□ -0.57
SCN4B-202ENST00000415030 RNF19AQ9NV58 838 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 ABCD2Q9UBJ2 740 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 CAPNS1P04632 268 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 OGNP20774 298 aaKnown RBP11.49□□□□□ -0.57
SCN4B-202ENST00000415030 CXCR3P49682 368 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 PLA2G16P53816 162 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 ACOX1Q15067 660 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 CYBRD1Q53TN4 286 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 ZRANB3Q5FWF4 1079 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 ARMCX4Q5H9R4 360 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 NANOGP8Q6NSW7 305 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 HFE2Q6ZVN8 426 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 MILR1Q7Z6M3 343 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 SLC22A16Q86VW1 577 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 SCML4Q8N228 414 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 NAA50Q9GZZ1 169 aaKnown RBP11.49□□□□□ -0.57
SCN4B-202ENST00000415030 NANOGQ9H9S0 305 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 ERVK-11Q9UQG0 969 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 BTBD3Q9Y2F9 522 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 PKP3Q9Y446 797 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 DNAJC15Q9Y5T4 150 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 LOC100130705A0A1B0GUX0 176 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 STX7O15400 261 aaKnown RBP11.49□□□□□ -0.57
SCN4B-202ENST00000415030 PAGE1O75459 146 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 RPP40O75818 363 aaKnown RBP11.49□□□□□ -0.57
SCN4B-202ENST00000415030 SIX3O95343 332 aaPredicted RBP11.49□□□□□ -0.57
SCN4B-202ENST00000415030 MAPK1P28482 360 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 LILRA4P59901 499 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 DAB2P98082 770 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 FAM110CQ1W6H9 321 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 GJC2Q5T442 439 aaPredicted RBP11.49□□□□□ -0.57
SCN4B-202ENST00000415030 TAC4Q86UU9 113 aa11.49□□□□□ -0.57
SCN4B-202ENST00000415030 CILP2Q8IUL8 1156 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms