RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 COLCA1Q6ZS62 124 aa4.72□□□□□ -1.65
HMGB3P31-201ENST00000413333 TPRG1Q6ZUI0 275 aa4.72□□□□□ -1.65
HMGB3P31-201ENST00000413333 PRIMA1Q86XR5 153 aa4.72□□□□□ -1.65
HMGB3P31-201ENST00000413333 SLC4A11Q8NBS3 891 aa4.72□□□□□ -1.65
HMGB3P31-201ENST00000413333 OR2AK2Q8NG84 335 aa4.72□□□□□ -1.65
HMGB3P31-201ENST00000413333 WDR20Q8TBZ3 569 aa4.72□□□□□ -1.65
HMGB3P31-201ENST00000413333 TAS1R2Q8TE23 839 aa4.72□□□□□ -1.65
HMGB3P31-201ENST00000413333 UTP15Q8TED0 518 aaKnown RBP4.72□□□□□ -1.65
HMGB3P31-201ENST00000413333 ZFAND2BQ8WV99 257 aa4.72□□□□□ -1.65
HMGB3P31-201ENST00000413333 SPACA9Q96E40 222 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P31-201ENST00000413333 CITED2Q99967 270 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P31-201ENST00000413333 MMTAG2Q9BU76 263 aaKnown RBP4.72□□□□□ -1.65
HMGB3P31-201ENST00000413333 MRIQ9BWK5 157 aa4.72□□□□□ -1.65
HMGB3P31-201ENST00000413333 ZBTB40Q9NUA8 1239 aa4.72□□□□□ -1.65
HMGB3P31-201ENST00000413333 ARGLU1Q9NWB6 273 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P31-201ENST00000413333 BTBD3Q9Y2F9 522 aa4.72□□□□□ -1.65
HMGB3P31-201ENST00000413333 LOXL2Q9Y4K0 774 aa4.72□□□□□ -1.65
HMGB3P31-201ENST00000413333 POMT1Q9Y6A1 747 aa4.72□□□□□ -1.65
HMGB3P31-201ENST00000413333 TRAV34A0A0B4J273 112 aa4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 IGHV4-28A0A0C4DH34 117 aa4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 KCNN4O15554 427 aa4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 NDUFS4O43181 175 aa4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 RGS14O43566 566 aa4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 SPRY3O43610 288 aa4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 CREG1O75629 220 aa4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 RECQL5O94762 991 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 SOX30O94993 753 aa4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 CELF2O95319 508 aaKnown RBP4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 FGF2P09038 288 aa4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 TNFRSF1BP20333 461 aa4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 NR2F2P24468 414 aa4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 OAS2P29728 719 aaKnown RBP4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 SNRPEP62304 92 aaKnown RBP4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 GPS2Q13227 327 aa4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 MVPQ14764 893 aaKnown RBP4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 DECR1Q16698 335 aa4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 HYAL4Q2M3T9 481 aa4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 C18orf63Q68DL7 685 aa4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 ERN2Q76MJ5 926 aaKnown RBP4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 ADCK2Q7Z695 626 aa4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 GPR180Q86V85 440 aa4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 TMEM173Q86WV6 379 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 NRROSQ86YC3 692 aa4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 ZNF595Q8IYB9 648 aa4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 DENND1AQ8TEH3 1009 aa4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 DEPDC1BQ8WUY9 529 aa4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 TAAR8Q969N4 342 aa4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 ZNF558Q96NG5 402 aa4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 SPAG5Q96R06 1193 aa4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 FNBP1Q96RU3 617 aa4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 GFI1Q99684 422 aa4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 GPATCH1Q9BRR8 931 aaKnown RBP4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 SLC25A23Q9BV35 468 aa4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 WDR26Q9H7D7 661 aa4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 NOX4Q9NPH5 578 aa4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 PIH1D3Q9NQM4 214 aaKnown RBP4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 ABCF3Q9NUQ8 709 aa4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 POT1Q9NUX5 634 aa4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 TRMT1Q9NXH9 659 aaKnown RBP4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 SLC24A2Q9UI40 661 aa4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 FBXL2Q9UKC9 423 aa4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 FZD10Q9ULW2 581 aa4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 SNX9Q9Y5X1 595 aa4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 PTGDR2Q9Y5Y4 395 aa4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 TAF1P21675 1872 aa4.71□□□□□ -1.66
HMGB3P31-201ENST00000413333 INAFM1C9JVW0 142 aa4.7□□□□□ -1.66
HMGB3P31-201ENST00000413333 FAM90A26D6RGX4 464 aa4.7□□□□□ -1.66
HMGB3P31-201ENST00000413333 H0Y626 953 aa4.7□□□□□ -1.66
HMGB3P31-201ENST00000413333 TNFRSF13BO14836 293 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P31-201ENST00000413333 ANKRD28O15084 1053 aa4.7□□□□□ -1.66
HMGB3P31-201ENST00000413333 AKAP8O43823 692 aaKnown RBP4.7□□□□□ -1.66
HMGB3P31-201ENST00000413333 LINGO3P0C6S8 592 aa4.7□□□□□ -1.66
HMGB3P31-201ENST00000413333 ACHEP22303 614 aa4.7□□□□□ -1.66
HMGB3P31-201ENST00000413333 LMO1P25800 156 aa4.7□□□□□ -1.66
HMGB3P31-201ENST00000413333 C21orf33P30042 268 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P31-201ENST00000413333 PCGF2P35227 344 aa4.7□□□□□ -1.66
HMGB3P31-201ENST00000413333 POLGP54098 1239 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P31-201ENST00000413333 SRSF1Q07955 248 aaKnown RBP eCLIP4.7□□□□□ -1.66
HMGB3P31-201ENST00000413333 SYT16Q17RD7 645 aa4.7□□□□□ -1.66
HMGB3P31-201ENST00000413333 AMZ1Q400G9 498 aa4.7□□□□□ -1.66
HMGB3P31-201ENST00000413333 PPP1R21Q6ZMI0 780 aa4.7□□□□□ -1.66
HMGB3P31-201ENST00000413333 MRPL10Q7Z7H8 261 aaKnown RBP4.7□□□□□ -1.66
HMGB3P31-201ENST00000413333 PIM3Q86V86 326 aa4.7□□□□□ -1.66
HMGB3P31-201ENST00000413333 MFN1Q8IWA4 741 aa4.7□□□□□ -1.66
HMGB3P31-201ENST00000413333 CCAR2Q8N163 923 aaKnown RBP4.7□□□□□ -1.66
HMGB3P31-201ENST00000413333 IQUBQ8NA54 791 aa4.7□□□□□ -1.66
HMGB3P31-201ENST00000413333 ACVR1CQ8NER5 493 aa4.7□□□□□ -1.66
HMGB3P31-201ENST00000413333 SLC44A1Q8WWI5 657 aa4.7□□□□□ -1.66
HMGB3P31-201ENST00000413333 DNAAF4Q8WXU2 420 aa4.7□□□□□ -1.66
HMGB3P31-201ENST00000413333 ERLEC1Q96DZ1 483 aa4.7□□□□□ -1.66
HMGB3P31-201ENST00000413333 CRAMP1Q96RY5 1269 aa4.7□□□□□ -1.66
HMGB3P31-201ENST00000413333 CSF3RQ99062 836 aa4.7□□□□□ -1.66
HMGB3P31-201ENST00000413333 MTERF1Q99551 399 aaKnown RBP4.7□□□□□ -1.66
HMGB3P31-201ENST00000413333 OLFM1Q99784 485 aa4.7□□□□□ -1.66
HMGB3P31-201ENST00000413333 NOL11Q9H8H0 719 aaKnown RBP4.7□□□□□ -1.66
HMGB3P31-201ENST00000413333 ANKZF1Q9H8Y5 726 aa4.7□□□□□ -1.66
HMGB3P31-201ENST00000413333 XAB2Q9HCS7 855 aaKnown RBP4.7□□□□□ -1.66
HMGB3P31-201ENST00000413333 CHCHD3Q9NX63 227 aaKnown RBP4.7□□□□□ -1.66
HMGB3P31-201ENST00000413333 PTGFRNQ9P2B2 879 aa4.7□□□□□ -1.66
HMGB3P31-201ENST00000413333 PADI3Q9ULW8 664 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms