RNA–Protein interactions for RNA: ENST00000412899.5

ITGA6-204, Transcript of integrin subunit alpha 6, humanhuman

TSL 1 (best)

Gene ITGA6, Length 970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-204ENST00000412899 HDAC11Q96DB2 347 aa18.41■□□□□ 0.54
ITGA6-204ENST00000412899 PLEKHG4BQ96PX9 1271 aa18.41■□□□□ 0.54
ITGA6-204ENST00000412899 SPATA16Q9BXB7 569 aa18.41■□□□□ 0.54
ITGA6-204ENST00000412899 ARFGAP3Q9NP61 516 aa18.41■□□□□ 0.54
ITGA6-204ENST00000412899 KLC4Q9NSK0 619 aa18.41■□□□□ 0.54
ITGA6-204ENST00000412899 ANAPC2Q9UJX6 822 aa18.41■□□□□ 0.54
ITGA6-204ENST00000412899 LILRA5A6NI73 299 aa18.4■□□□□ 0.54
ITGA6-204ENST00000412899 PJA2O43164 708 aa18.4■□□□□ 0.54
ITGA6-204ENST00000412899 ZRANB2O95218 330 aaKnown RBP eCLIP18.4■□□□□ 0.54
ITGA6-204ENST00000412899 SLC25A14O95258 325 aaPredicted RBP18.4■□□□□ 0.54
ITGA6-204ENST00000412899 JCHAINP01591 159 aa18.4■□□□□ 0.54
ITGA6-204ENST00000412899 ZNF8P17098 575 aaPredicted RBP18.4■□□□□ 0.54
ITGA6-204ENST00000412899 TCN2P20062 427 aa18.4■□□□□ 0.54
ITGA6-204ENST00000412899 DYNLT1P63172 113 aa18.4■□□□□ 0.54
ITGA6-204ENST00000412899 DEFB109BQ30KR1 87 aa18.4■□□□□ 0.54
ITGA6-204ENST00000412899 ZNF569Q5MCW4 686 aa18.4■□□□□ 0.54
ITGA6-204ENST00000412899 ALS2CLQ60I27 953 aa18.4■□□□□ 0.54
ITGA6-204ENST00000412899 RCOR2Q8IZ40 523 aa18.4■□□□□ 0.54
ITGA6-204ENST00000412899 ESX1Q8N693 406 aa18.4■□□□□ 0.54
ITGA6-204ENST00000412899 DESI2Q9BSY9 194 aa18.4■□□□□ 0.54
ITGA6-204ENST00000412899 OR2AG1Q9H205 316 aa18.4■□□□□ 0.54
ITGA6-204ENST00000412899 ZFYVE1Q9HBF4 777 aa18.4■□□□□ 0.54
ITGA6-204ENST00000412899 TRIM39Q9HCM9 518 aa18.4■□□□□ 0.54
ITGA6-204ENST00000412899 KCNK1O00180 336 aa18.39■□□□□ 0.53
ITGA6-204ENST00000412899 DLGAP3O95886 979 aa18.39■□□□□ 0.53
ITGA6-204ENST00000412899 VIPP01282 170 aa18.39■□□□□ 0.53
ITGA6-204ENST00000412899 MMP2P08253 660 aa18.39■□□□□ 0.53
ITGA6-204ENST00000412899 ANKRD34CP0C6C1 535 aa18.39■□□□□ 0.53
ITGA6-204ENST00000412899 OAS2P29728 719 aaKnown RBP18.39■□□□□ 0.53
ITGA6-204ENST00000412899 CASRP41180 1078 aa18.39■□□□□ 0.53
ITGA6-204ENST00000412899 CDKN2BP42772 138 aa18.39■□□□□ 0.53
ITGA6-204ENST00000412899 CLCNKAP51800 687 aa18.39■□□□□ 0.53
ITGA6-204ENST00000412899 GFERP55789 205 aa18.39■□□□□ 0.53
ITGA6-204ENST00000412899 KIF5AQ12840 1032 aa18.39■□□□□ 0.53
ITGA6-204ENST00000412899 SEPT6Q14141 434 aa18.39■□□□□ 0.53
ITGA6-204ENST00000412899 TFDP2Q14188 446 aa18.39■□□□□ 0.53
ITGA6-204ENST00000412899 GALNT3Q14435 633 aa18.39■□□□□ 0.53
ITGA6-204ENST00000412899 LLGL1Q15334 1064 aa18.39■□□□□ 0.53
ITGA6-204ENST00000412899 INSCQ1MX18 579 aa18.39■□□□□ 0.53
ITGA6-204ENST00000412899 ZNF648Q5T619 568 aaPredicted RBP18.39■□□□□ 0.53
ITGA6-204ENST00000412899 KAZNQ674X7 775 aa18.39■□□□□ 0.53
ITGA6-204ENST00000412899 CRTC3Q6UUV7 619 aa18.39■□□□□ 0.53
ITGA6-204ENST00000412899 NPNTQ6UXI9 565 aa18.39■□□□□ 0.53
ITGA6-204ENST00000412899 SPOCD1Q6ZMY3 1216 aa18.39■□□□□ 0.53
ITGA6-204ENST00000412899 CCDC50Q8IVM0 306 aa18.39■□□□□ 0.53
ITGA6-204ENST00000412899 TRIM48Q8IWZ4 208 aa18.39■□□□□ 0.53
ITGA6-204ENST00000412899 KATNAL2Q8IYT4 538 aa18.39■□□□□ 0.53
ITGA6-204ENST00000412899 ABHD17AQ96GS6 310 aa18.39■□□□□ 0.53
ITGA6-204ENST00000412899 ULBP3Q9BZM4 244 aa18.39■□□□□ 0.53
ITGA6-204ENST00000412899 MN1Q10571 1320 aaPredicted RBP18.39■□□□□ 0.53
ITGA6-204ENST00000412899 SLC4A1P02730 911 aa18.38■□□□□ 0.53
ITGA6-204ENST00000412899 TYRP1P17643 537 aa18.38■□□□□ 0.53
ITGA6-204ENST00000412899 AMD1P17707 334 aa18.38■□□□□ 0.53
ITGA6-204ENST00000412899 XRCC1P18887 633 aaPredicted RBP18.38■□□□□ 0.53
ITGA6-204ENST00000412899 STAT5AP42229 794 aa18.38■□□□□ 0.53
ITGA6-204ENST00000412899 MARCKSL1P49006 195 aa18.38■□□□□ 0.53
ITGA6-204ENST00000412899 UBE2IP63279 158 aaKnown RBP18.38■□□□□ 0.53
ITGA6-204ENST00000412899 AP1B1Q10567 949 aa18.38■□□□□ 0.53
ITGA6-204ENST00000412899 MAP7Q14244 749 aa18.38■□□□□ 0.53
ITGA6-204ENST00000412899 PDK1Q15118 436 aa18.38■□□□□ 0.53
ITGA6-204ENST00000412899 TAZQ16635 292 aa18.38■□□□□ 0.53
ITGA6-204ENST00000412899 PLA2G4EQ3MJ16 856 aa18.38■□□□□ 0.53
ITGA6-204ENST00000412899 TFDP3Q5H9I0 405 aa18.38■□□□□ 0.53
ITGA6-204ENST00000412899 TMEM26Q6ZUK4 368 aa18.38■□□□□ 0.53
ITGA6-204ENST00000412899 GPR26Q8NDV2 337 aa18.38■□□□□ 0.53
ITGA6-204ENST00000412899 KRT35Q92764 455 aa18.38■□□□□ 0.53
ITGA6-204ENST00000412899 C9orf72Q96LT7 481 aa18.38■□□□□ 0.53
ITGA6-204ENST00000412899 ZSCAN5AQ9BUG6 496 aa18.38■□□□□ 0.53
ITGA6-204ENST00000412899 UCK1Q9HA47 277 aa18.38■□□□□ 0.53
ITGA6-204ENST00000412899 RAD18Q9NS91 495 aa18.38■□□□□ 0.53
ITGA6-204ENST00000412899 SIDT1Q9NXL6 827 aaKnown RBP18.38■□□□□ 0.53
ITGA6-204ENST00000412899 SCHIP1Q9P0W5 487 aaPredicted RBP18.38■□□□□ 0.53
ITGA6-204ENST00000412899 SHOC2Q9UQ13 582 aa18.38■□□□□ 0.53
ITGA6-204ENST00000412899 PCDHB3Q9Y5E6 796 aa18.38■□□□□ 0.53
ITGA6-204ENST00000412899 ADGRG1Q9Y653 693 aa18.38■□□□□ 0.53
ITGA6-204ENST00000412899 RPS6KL1Q9Y6S9 549 aa18.38■□□□□ 0.53
ITGA6-204ENST00000412899 SPTA1P02549 2419 aa18.38■□□□□ 0.53
ITGA6-204ENST00000412899 MACROD2A1Z1Q3 448 aa18.37■□□□□ 0.53
ITGA6-204ENST00000412899 PDZK1P1A8MUH7 402 aa18.37■□□□□ 0.53
ITGA6-204ENST00000412899 GPR89AB7ZAQ6 455 aa18.37■□□□□ 0.53
ITGA6-204ENST00000412899 CST8O60676 142 aa18.37■□□□□ 0.53
ITGA6-204ENST00000412899 UBXN7O94888 489 aa18.37■□□□□ 0.53
ITGA6-204ENST00000412899 C9P02748 559 aa18.37■□□□□ 0.53
ITGA6-204ENST00000412899 PIRTP0C851 137 aa18.37■□□□□ 0.53
ITGA6-204ENST00000412899 GPR89BP0CG08 455 aa18.37■□□□□ 0.53
ITGA6-204ENST00000412899 SEPHS1P49903 392 aa18.37■□□□□ 0.53
ITGA6-204ENST00000412899 SRSF1Q07955 248 aaKnown RBP eCLIP18.37■□□□□ 0.53
ITGA6-204ENST00000412899 PPIDQ08752 370 aaKnown RBP18.37■□□□□ 0.53
ITGA6-204ENST00000412899 ZBTB17Q13105 803 aa18.37■□□□□ 0.53
ITGA6-204ENST00000412899 IGFBP7Q16270 282 aa18.37■□□□□ 0.53
ITGA6-204ENST00000412899 ATP1A1-AS1Q5TC04 95 aa18.37■□□□□ 0.53
ITGA6-204ENST00000412899 ADGRG6Q86SQ4 1221 aa18.37■□□□□ 0.53
ITGA6-204ENST00000412899 TRAM1L1Q8N609 369 aa18.37■□□□□ 0.53
ITGA6-204ENST00000412899 CNTD1Q8N815 330 aa18.37■□□□□ 0.53
ITGA6-204ENST00000412899 GLYATL1Q969I3 302 aa18.37■□□□□ 0.53
ITGA6-204ENST00000412899 EID2BQ96D98 161 aa18.37■□□□□ 0.53
ITGA6-204ENST00000412899 RNF31Q96EP0 1072 aa18.37■□□□□ 0.53
ITGA6-204ENST00000412899 RBM41Q96IZ5 413 aaKnown RBP18.37■□□□□ 0.53
ITGA6-204ENST00000412899 TGM7Q96PF1 710 aa18.37■□□□□ 0.53
ITGA6-204ENST00000412899 GPR63Q9BZJ6 419 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms