RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 IYDQ6PHW0 289 aa18.57■□□□□ 0.56
TRIM56-202ENST00000412507 FOXR1Q6PIV2 292 aa18.57■□□□□ 0.56
TRIM56-202ENST00000412507 TMPRSS9Q7Z410 1059 aa18.57■□□□□ 0.56
TRIM56-202ENST00000412507 C11orf96Q7Z7L8 435 aa18.57■□□□□ 0.56
TRIM56-202ENST00000412507 ZNF761Q86XN6 746 aaPredicted RBP18.57■□□□□ 0.56
TRIM56-202ENST00000412507 TRAPPC5Q8IUR0 188 aa18.57■□□□□ 0.56
TRIM56-202ENST00000412507 MAIP1Q8WWC4 291 aa18.57■□□□□ 0.56
TRIM56-202ENST00000412507 TIMM29Q9BSF4 260 aa18.57■□□□□ 0.56
TRIM56-202ENST00000412507 RDH14Q9HBH5 336 aa18.57■□□□□ 0.56
TRIM56-202ENST00000412507 SMOXQ9NWM0 555 aa18.57■□□□□ 0.56
TRIM56-202ENST00000412507 ITPR1Q14643 2758 aa18.56■□□□□ 0.56
TRIM56-202ENST00000412507 CCDC187A0A096LP49 1063 aa18.56■□□□□ 0.56
TRIM56-202ENST00000412507 GPR3P46089 330 aa18.56■□□□□ 0.56
TRIM56-202ENST00000412507 FASLGP48023 281 aa18.56■□□□□ 0.56
TRIM56-202ENST00000412507 CTSCP53634 463 aa18.56■□□□□ 0.56
TRIM56-202ENST00000412507 SEPT6Q14141 434 aa18.56■□□□□ 0.56
TRIM56-202ENST00000412507 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.56■□□□□ 0.56
TRIM56-202ENST00000412507 DRICH1Q6PGQ1 229 aaPredicted RBP18.56■□□□□ 0.56
TRIM56-202ENST00000412507 TMEM220Q6QAJ8 160 aa18.56■□□□□ 0.56
TRIM56-202ENST00000412507 MICALCLQ6ZW33 695 aa18.56■□□□□ 0.56
TRIM56-202ENST00000412507 USP53Q70EK8 1073 aa18.56■□□□□ 0.56
TRIM56-202ENST00000412507 LINC00523Q86TU6 105 aa18.56■□□□□ 0.56
TRIM56-202ENST00000412507 LSMEM2Q8N112 164 aa18.56■□□□□ 0.56
TRIM56-202ENST00000412507 CCDC89Q8N998 374 aa18.56■□□□□ 0.56
TRIM56-202ENST00000412507 RASGEF1AQ8N9B8 481 aa18.56■□□□□ 0.56
TRIM56-202ENST00000412507 OR52K1Q8NGK4 314 aa18.56■□□□□ 0.56
TRIM56-202ENST00000412507 WDR36Q8NI36 951 aaKnown RBP18.56■□□□□ 0.56
TRIM56-202ENST00000412507 LIN37Q96GY3 246 aaPredicted RBP18.56■□□□□ 0.56
TRIM56-202ENST00000412507 DNAJC1Q96KC8 554 aaKnown RBP18.56■□□□□ 0.56
TRIM56-202ENST00000412507 TMEM74Q96NL1 305 aa18.56■□□□□ 0.56
TRIM56-202ENST00000412507 ZCCHC2Q9C0B9 1178 aaKnown RBP18.56■□□□□ 0.56
TRIM56-202ENST00000412507 FAM96AQ9H5X1 160 aa18.56■□□□□ 0.56
TRIM56-202ENST00000412507 SCHIP1Q9P0W5 487 aaPredicted RBP18.56■□□□□ 0.56
TRIM56-202ENST00000412507 DRG1Q9Y295 367 aaKnown RBP18.56■□□□□ 0.56
TRIM56-202ENST00000412507 ZKSCAN5Q9Y2L8 839 aa18.56■□□□□ 0.56
TRIM56-202ENST00000412507 CELSR3Q9NYQ7 3312 aa18.56■□□□□ 0.56
TRIM56-202ENST00000412507 CHD6Q8TD26 2715 aa18.56■□□□□ 0.56
TRIM56-202ENST00000412507 OR2AG2A6NM03 316 aa18.55■□□□□ 0.56
TRIM56-202ENST00000412507 ERI2A8K979 691 aaKnown RBP18.55■□□□□ 0.56
TRIM56-202ENST00000412507 TMX2-CTNND1H3BSU7 103 aa18.55■□□□□ 0.56
TRIM56-202ENST00000412507 AGRPO00253 132 aa18.55■□□□□ 0.56
TRIM56-202ENST00000412507 ZW10O43264 779 aa18.55■□□□□ 0.56
TRIM56-202ENST00000412507 CPNE6O95741 557 aa18.55■□□□□ 0.56
TRIM56-202ENST00000412507 ZSCAN5DPP0CG00 497 aa18.55■□□□□ 0.56
TRIM56-202ENST00000412507 SLC2A4P14672 509 aa18.55■□□□□ 0.56
TRIM56-202ENST00000412507 MSH3P20585 1137 aa18.55■□□□□ 0.56
TRIM56-202ENST00000412507 CD1CP29017 333 aa18.55■□□□□ 0.56
TRIM56-202ENST00000412507 AKT1P31749 480 aa18.55■□□□□ 0.56
TRIM56-202ENST00000412507 CCKBRP32239 447 aa18.55■□□□□ 0.56
TRIM56-202ENST00000412507 HADHAP40939 763 aa18.55■□□□□ 0.56
TRIM56-202ENST00000412507 KCNJ1P48048 391 aa18.55■□□□□ 0.56
TRIM56-202ENST00000412507 LMAN1P49257 510 aa18.55■□□□□ 0.56
TRIM56-202ENST00000412507 HHEXQ03014 270 aa18.55■□□□□ 0.56
TRIM56-202ENST00000412507 SEPT7Q16181 437 aaKnown RBP18.55■□□□□ 0.56
TRIM56-202ENST00000412507 TBC1D25Q3MII6 688 aa18.55■□□□□ 0.56
TRIM56-202ENST00000412507 MAP9Q49MG5 647 aa18.55■□□□□ 0.56
TRIM56-202ENST00000412507 NKAIN2Q5VXU1 208 aa18.55■□□□□ 0.56
TRIM56-202ENST00000412507 SLC9B2Q86UD5 537 aa18.55■□□□□ 0.56
TRIM56-202ENST00000412507 PIM3Q86V86 326 aa18.55■□□□□ 0.56
TRIM56-202ENST00000412507 NAT14Q8WUY8 206 aa18.55■□□□□ 0.56
TRIM56-202ENST00000412507 PRR11Q96HE9 360 aaPredicted RBP18.55■□□□□ 0.56
TRIM56-202ENST00000412507 DCBLD2Q96PD2 775 aa18.55■□□□□ 0.56
TRIM56-202ENST00000412507 SLC38A3Q99624 504 aa18.55■□□□□ 0.56
TRIM56-202ENST00000412507 NUDT22Q9BRQ3 303 aa18.55■□□□□ 0.56
TRIM56-202ENST00000412507 SEMA6CQ9H3T2 930 aa18.55■□□□□ 0.56
TRIM56-202ENST00000412507 SARS2Q9NP81 518 aaKnown RBP18.55■□□□□ 0.56
TRIM56-202ENST00000412507 RAB6BQ9NRW1 208 aa18.55■□□□□ 0.56
TRIM56-202ENST00000412507 KCNK4Q9NYG8 393 aa18.55■□□□□ 0.56
TRIM56-202ENST00000412507 PAK5Q9P286 719 aa18.55■□□□□ 0.56
TRIM56-202ENST00000412507 JRKLQ9Y4A0 524 aa18.55■□□□□ 0.56
TRIM56-202ENST00000412507 IGHV1OR21-1A0A087WYE8 117 aa18.54■□□□□ 0.56
TRIM56-202ENST00000412507 KIR2DS5A0A0G2JLQ3 304 aa18.54■□□□□ 0.56
TRIM56-202ENST00000412507 A0A0G2JNG1 304 aa18.54■□□□□ 0.56
TRIM56-202ENST00000412507 PRR19A6NJB7 356 aa18.54■□□□□ 0.56
TRIM56-202ENST00000412507 OR5K4A6NMS3 321 aa18.54■□□□□ 0.56
TRIM56-202ENST00000412507 E7EVH7 732 aa18.54■□□□□ 0.56
TRIM56-202ENST00000412507 KIR2DS3K7RE56 304 aa18.54■□□□□ 0.56
TRIM56-202ENST00000412507 ZSCAN12O43309 604 aa18.54■□□□□ 0.56
TRIM56-202ENST00000412507 RPL10P27635 214 aaKnown RBP18.54■□□□□ 0.56
TRIM56-202ENST00000412507 MC4RP32245 332 aa18.54■□□□□ 0.56
TRIM56-202ENST00000412507 RPL22P35268 128 aaKnown RBP18.54■□□□□ 0.56
TRIM56-202ENST00000412507 ZFP36L1Q07352 338 aaKnown RBP18.54■□□□□ 0.56
TRIM56-202ENST00000412507 CDH17Q12864 832 aa18.54■□□□□ 0.56
TRIM56-202ENST00000412507 NFATC2Q13469 925 aa18.54■□□□□ 0.56
TRIM56-202ENST00000412507 SEMA5AQ13591 1074 aa18.54■□□□□ 0.56
TRIM56-202ENST00000412507 GSE1Q14687 1217 aa18.54■□□□□ 0.56
TRIM56-202ENST00000412507 KIR2DS5Q14953 304 aa18.54■□□□□ 0.56
TRIM56-202ENST00000412507 DET1Q7L5Y6 550 aa18.54■□□□□ 0.56
TRIM56-202ENST00000412507 RAB11FIP2Q7L804 512 aa18.54■□□□□ 0.56
TRIM56-202ENST00000412507 SLITRK4Q8IW52 837 aa18.54■□□□□ 0.56
TRIM56-202ENST00000412507 SLC35F6Q8N357 371 aa18.54■□□□□ 0.56
TRIM56-202ENST00000412507 DNAAF3Q8N9W5 541 aa18.54■□□□□ 0.56
TRIM56-202ENST00000412507 ANP32BQ92688 251 aaKnown RBP18.54■□□□□ 0.56
TRIM56-202ENST00000412507 FGF11Q92914 225 aa18.54■□□□□ 0.56
TRIM56-202ENST00000412507 C19orf43Q9BQ61 176 aa18.54■□□□□ 0.56
TRIM56-202ENST00000412507 STRADBQ9C0K7 418 aa18.54■□□□□ 0.56
TRIM56-202ENST00000412507 STN1Q9H668 368 aaKnown RBP18.54■□□□□ 0.56
TRIM56-202ENST00000412507 ASCL3Q9NQ33 180 aa18.54■□□□□ 0.56
TRIM56-202ENST00000412507 NLE1Q9NVX2 485 aaPredicted RBP18.54■□□□□ 0.56
TRIM56-202ENST00000412507 TRMT1Q9NXH9 659 aaKnown RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms