RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 SFTPA2Q8IWL1 248 aa13.77□□□□□ -0.21
CPNE1-206ENST00000412056 SDR16C5Q8N3Y7 309 aa13.77□□□□□ -0.21
CPNE1-206ENST00000412056 PNPLA1Q8N8W4 532 aa13.77□□□□□ -0.21
CPNE1-206ENST00000412056 OR6P1Q8NGX9 317 aa13.77□□□□□ -0.21
CPNE1-206ENST00000412056 ZNF669Q96BR6 464 aaPredicted RBP13.77□□□□□ -0.21
CPNE1-206ENST00000412056 APOLD1Q96LR9 279 aa13.77□□□□□ -0.21
CPNE1-206ENST00000412056 TTC25Q96NG3 672 aa13.77□□□□□ -0.21
CPNE1-206ENST00000412056 CDC6Q99741 560 aa13.77□□□□□ -0.21
CPNE1-206ENST00000412056 ERP44Q9BS26 406 aa13.77□□□□□ -0.21
CPNE1-206ENST00000412056 DUSP23Q9BVJ7 150 aa13.77□□□□□ -0.21
CPNE1-206ENST00000412056 BOCQ9BWV1 1114 aa13.77□□□□□ -0.21
CPNE1-206ENST00000412056 ZCCHC2Q9C0B9 1178 aaKnown RBP13.77□□□□□ -0.21
CPNE1-206ENST00000412056 SIRPGQ9P1W8 387 aa13.77□□□□□ -0.21
CPNE1-206ENST00000412056 GPR34Q9UPC5 381 aa13.77□□□□□ -0.21
CPNE1-206ENST00000412056 KCNK6Q9Y257 313 aa13.77□□□□□ -0.21
CPNE1-206ENST00000412056 U3KQA8 63 aa13.77□□□□□ -0.21
CPNE1-206ENST00000412056 CTAGE15A4D2H0 777 aa13.76□□□□□ -0.21
CPNE1-206ENST00000412056 OR2AG2A6NM03 316 aa13.76□□□□□ -0.21
CPNE1-206ENST00000412056 GPR89AB7ZAQ6 455 aa13.76□□□□□ -0.21
CPNE1-206ENST00000412056 KMOO15229 486 aa13.76□□□□□ -0.21
CPNE1-206ENST00000412056 GPR89BP0CG08 455 aa13.76□□□□□ -0.21
CPNE1-206ENST00000412056 CTAGE8P0CG41 777 aa13.76□□□□□ -0.21
CPNE1-206ENST00000412056 MSH3P20585 1137 aa13.76□□□□□ -0.21
CPNE1-206ENST00000412056 ACTR1BP42025 376 aa13.76□□□□□ -0.21
CPNE1-206ENST00000412056 ACTR1AP61163 376 aa13.76□□□□□ -0.21
CPNE1-206ENST00000412056 DNAJC3Q13217 504 aa13.76□□□□□ -0.21
CPNE1-206ENST00000412056 SEMA3AQ14563 771 aa13.76□□□□□ -0.21
CPNE1-206ENST00000412056 BBS9Q3SYG4 887 aa13.76□□□□□ -0.21
CPNE1-206ENST00000412056 PPM1JQ5JR12 505 aa13.76□□□□□ -0.21
CPNE1-206ENST00000412056 ARMC3Q5W041 872 aa13.76□□□□□ -0.21
CPNE1-206ENST00000412056 DUPD1Q68J44 220 aa13.76□□□□□ -0.21
CPNE1-206ENST00000412056 KIAA0930Q6ICG6 404 aaPredicted RBP13.76□□□□□ -0.21
CPNE1-206ENST00000412056 ZCCHC8Q6NZY4 707 aaKnown RBP13.76□□□□□ -0.21
CPNE1-206ENST00000412056 LVRNQ6Q4G3 990 aa13.76□□□□□ -0.21
CPNE1-206ENST00000412056 CTAGE6Q86UF2 777 aa13.76□□□□□ -0.21
CPNE1-206ENST00000412056 CTAGE4Q8IX94 777 aa13.76□□□□□ -0.21
CPNE1-206ENST00000412056 SLC35F3Q8IY50 421 aa13.76□□□□□ -0.21
CPNE1-206ENST00000412056 MMGT1Q8N4V1 131 aa13.76□□□□□ -0.21
CPNE1-206ENST00000412056 KYQ8NBH2 561 aa13.76□□□□□ -0.21
CPNE1-206ENST00000412056 NOA1Q8NC60 698 aaKnown RBP13.76□□□□□ -0.21
CPNE1-206ENST00000412056 MNS1Q8NEH6 495 aa13.76□□□□□ -0.21
CPNE1-206ENST00000412056 OR4L1Q8NH43 312 aa13.76□□□□□ -0.21
CPNE1-206ENST00000412056 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.76□□□□□ -0.212e-6■■■■■ 26.8
CPNE1-206ENST00000412056 STAMBPL1Q96FJ0 436 aa13.76□□□□□ -0.21
CPNE1-206ENST00000412056 COPS8Q99627 209 aa13.76□□□□□ -0.21
CPNE1-206ENST00000412056 LRRC1Q9BTT6 524 aa13.76□□□□□ -0.21
CPNE1-206ENST00000412056 RAB17Q9H0T7 212 aa13.76□□□□□ -0.21
CPNE1-206ENST00000412056 SPATS2LQ9NUQ6 558 aaKnown RBP13.76□□□□□ -0.21
CPNE1-206ENST00000412056 ZDHHC3Q9NYG2 299 aa13.76□□□□□ -0.21
CPNE1-206ENST00000412056 GRHL1Q9NZI5 618 aa13.76□□□□□ -0.21
CPNE1-206ENST00000412056 TAAR2Q9P1P5 351 aa13.76□□□□□ -0.21
CPNE1-206ENST00000412056 SLC23A2Q9UGH3 650 aa13.76□□□□□ -0.21
CPNE1-206ENST00000412056 ANAPC5Q9UJX4 755 aa13.76□□□□□ -0.21
CPNE1-206ENST00000412056 UTP11Q9Y3A2 253 aaKnown RBP13.76□□□□□ -0.21
CPNE1-206ENST00000412056 MAD1L1Q9Y6D9 718 aa13.76□□□□□ -0.21
CPNE1-206ENST00000412056 IGLV3-16A0A075B6K0 115 aa13.75□□□□□ -0.21
CPNE1-206ENST00000412056 FAM237BA0A1B0GVD1 139 aa13.75□□□□□ -0.21
CPNE1-206ENST00000412056 B4DGG1 531 aa13.75□□□□□ -0.21
CPNE1-206ENST00000412056 SMAPO00193 183 aa13.75□□□□□ -0.21
CPNE1-206ENST00000412056 TNFSF14O43557 240 aa13.75□□□□□ -0.21
CPNE1-206ENST00000412056 SGTAO43765 313 aa13.75□□□□□ -0.21
CPNE1-206ENST00000412056 VAPBO95292 243 aa13.75□□□□□ -0.21
CPNE1-206ENST00000412056 ZNF7P17097 686 aaPredicted RBP13.75□□□□□ -0.21
CPNE1-206ENST00000412056 PBLDP30039 288 aaPredicted RBP13.75□□□□□ -0.21
CPNE1-206ENST00000412056 SIM1P81133 766 aaPredicted RBP13.75□□□□□ -0.21
CPNE1-206ENST00000412056 DAB2P98082 770 aa13.75□□□□□ -0.21
CPNE1-206ENST00000412056 SLC7A5Q01650 507 aa13.75□□□□□ -0.21
CPNE1-206ENST00000412056 LRP8Q14114 963 aa13.75□□□□□ -0.21
CPNE1-206ENST00000412056 INSCQ1MX18 579 aa13.75□□□□□ -0.21
CPNE1-206ENST00000412056 ANKRD20A4Q4UJ75 823 aa13.75□□□□□ -0.21
CPNE1-206ENST00000412056 DNAJC21Q5F1R6 531 aaKnown RBP13.75□□□□□ -0.21
CPNE1-206ENST00000412056 TMEM220Q6QAJ8 160 aa13.75□□□□□ -0.21
CPNE1-206ENST00000412056 C11orf96Q7Z7L8 435 aa13.75□□□□□ -0.21
CPNE1-206ENST00000412056 GLRX5Q86SX6 157 aa13.75□□□□□ -0.21
CPNE1-206ENST00000412056 LDB1Q86U70 411 aaPredicted RBP13.75□□□□□ -0.21
CPNE1-206ENST00000412056 FAM181AQ8N9Y4 354 aa13.75□□□□□ -0.21
CPNE1-206ENST00000412056 BBOF1Q8ND07 529 aa13.75□□□□□ -0.21
CPNE1-206ENST00000412056 FAM46DQ8NEK8 389 aa13.75□□□□□ -0.21
CPNE1-206ENST00000412056 SCG3Q8WXD2 468 aaKnown RBP13.75□□□□□ -0.21
CPNE1-206ENST00000412056 SGF29Q96ES7 293 aa13.75□□□□□ -0.21
CPNE1-206ENST00000412056 DCUN1D1Q96GG9 259 aa13.75□□□□□ -0.21
CPNE1-206ENST00000412056 SGSM3Q96HU1 749 aa13.75□□□□□ -0.21
CPNE1-206ENST00000412056 FCRL3Q96P31 734 aaPredicted RBP13.75□□□□□ -0.21
CPNE1-206ENST00000412056 WDR83Q9BRX9 315 aaKnown RBP13.75□□□□□ -0.21
CPNE1-206ENST00000412056 CATSPERZQ9NTU4 200 aa13.75□□□□□ -0.21
CPNE1-206ENST00000412056 TOR4AQ9NXH8 423 aa13.75□□□□□ -0.21
CPNE1-206ENST00000412056 IL1RAPL1Q9NZN1 696 aa13.75□□□□□ -0.21
CPNE1-206ENST00000412056 WHRNQ9P202 907 aa13.75□□□□□ -0.21
CPNE1-206ENST00000412056 MARCH4Q9P2E8 410 aaPredicted RBP13.75□□□□□ -0.21
CPNE1-206ENST00000412056 RPS6KL1Q9Y6S9 549 aa13.75□□□□□ -0.21
CPNE1-206ENST00000412056 COL27A1Q8IZC6 1860 aaPredicted RBP13.74□□□□□ -0.21
CPNE1-206ENST00000412056 DMXL1Q9Y485 3027 aa13.74□□□□□ -0.21
CPNE1-206ENST00000412056 SPTBN4Q9H254 2564 aa13.74□□□□□ -0.21
CPNE1-206ENST00000412056 ZCWPW2A0A1B0GU75 182 aa13.74□□□□□ -0.21
CPNE1-206ENST00000412056 CFAP99D6REC4 459 aa13.74□□□□□ -0.21
CPNE1-206ENST00000412056 GOLGA8KD6RF30 607 aa13.74□□□□□ -0.21
CPNE1-206ENST00000412056 GOLGA8TH3BQL2 631 aa13.74□□□□□ -0.21
CPNE1-206ENST00000412056 NOBOXO60393 691 aa13.74□□□□□ -0.21
CPNE1-206ENST00000412056 RALBP11234 206 aa13.74□□□□□ -0.21
CPNE1-206ENST00000412056 ATP1B2P14415 290 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms