RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 RGS9BPQ6ZS82 235 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 TRIM74Q86UV6 250 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 OR14C36Q8NHC7 312 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 EEF1AKMT1Q8WVE0 214 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 PTERQ96BW5 349 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 LINGO1Q96FE5 620 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 MRPL57Q9BQC6 102 aaKnown RBP12.31□□□□□ -0.44
CHMP3-204ENST00000409727 TSSK1BQ9BXA7 367 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 SYTL2Q9HCH5 934 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 COMMD10Q9Y6G5 202 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 PLXNB3Q9ULL4 1909 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 PLXNA2O75051 1894 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 RGSL1A5PLK6 1076 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 NEMP2A6NFY4 417 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 OR2AG2A6NM03 316 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 LOC730098B7Z3J9 87 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 EDF1O60869 148 aaKnown RBP12.31□□□□□ -0.44
CHMP3-204ENST00000409727 LYPLA1O75608 230 aaPredicted RBP12.31□□□□□ -0.44
CHMP3-204ENST00000409727 RALBP11234 206 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 GLULP15104 373 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 MSH3P20585 1137 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 IL2P60568 153 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 STX3Q13277 289 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 ITIH4Q14624 930 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 ACAP2Q15057 778 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 HABP4Q5JVS0 413 aaKnown RBP12.31□□□□□ -0.44
CHMP3-204ENST00000409727 ATG16L1Q676U5 607 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 SEL1L3Q68CR1 1132 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 UGT3A1Q6NUS8 523 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 KIAA1324Q6UXG2 1013 aaKnown RBP12.31□□□□□ -0.44
CHMP3-204ENST00000409727 TMEM92Q6UXU6 159 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 OTOAQ7RTW8 1153 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 CCDC91Q7Z6B0 441 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 ISCA2Q86U28 154 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 TRIM42Q8IWZ5 723 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 NRSN1Q8IZ57 195 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 BEND7Q8N7W2 519 aaPredicted RBP12.31□□□□□ -0.44
CHMP3-204ENST00000409727 BTN2A2Q8WVV5 523 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 KLK6Q92876 244 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 GLYATL1Q969I3 302 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 OSBPL6Q9BZF3 934 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 C20orf27Q9GZN8 174 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 CDH19Q9H159 772 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 CYP4F12Q9HCS2 524 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 FAM8A1Q9UBU6 413 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 IKZF3Q9UKT9 509 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 LRRK1Q38SD2 2015 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 TCRBV21S2A2A0A5A6 115 aa12.3□□□□□ -0.44
CHMP3-204ENST00000409727 NPEPPSL1A6NEC2 478 aa12.3□□□□□ -0.44
CHMP3-204ENST00000409727 BTN3A1O00481 513 aa12.3□□□□□ -0.44
CHMP3-204ENST00000409727 DLX3O60479 287 aa12.3□□□□□ -0.44
CHMP3-204ENST00000409727 PCCBP05166 539 aa12.3□□□□□ -0.44
CHMP3-204ENST00000409727 RBP1P09455 135 aa12.3□□□□□ -0.44
CHMP3-204ENST00000409727 ATP1B2P14415 290 aaPredicted RBP12.3□□□□□ -0.44
CHMP3-204ENST00000409727 SKIV2L2P42285 1042 aaKnown RBP12.3□□□□□ -0.44
CHMP3-204ENST00000409727 GPR1P46091 355 aa12.3□□□□□ -0.44
CHMP3-204ENST00000409727 KCNC1P48547 511 aa12.3□□□□□ -0.44
CHMP3-204ENST00000409727 NUBP1P53384 320 aa12.3□□□□□ -0.44
CHMP3-204ENST00000409727 OR4D1Q15615 310 aa12.3□□□□□ -0.44
CHMP3-204ENST00000409727 GKAP1Q5VSY0 366 aaPredicted RBP12.3□□□□□ -0.44
CHMP3-204ENST00000409727 CGB2Q6NT52 195 aa12.3□□□□□ -0.44
CHMP3-204ENST00000409727 FOXR1Q6PIV2 292 aa12.3□□□□□ -0.44
CHMP3-204ENST00000409727 ZNF852Q6ZMS4 543 aa12.3□□□□□ -0.44
CHMP3-204ENST00000409727 MACC1Q6ZN28 852 aa12.3□□□□□ -0.44
CHMP3-204ENST00000409727 MAFAQ8NHW3 353 aaPredicted RBP12.3□□□□□ -0.44
CHMP3-204ENST00000409727 SIPA1Q96FS4 1042 aa12.3□□□□□ -0.44
CHMP3-204ENST00000409727 CD93Q9NPY3 652 aa12.3□□□□□ -0.44
CHMP3-204ENST00000409727 SMOXQ9NWM0 555 aa12.3□□□□□ -0.44
CHMP3-204ENST00000409727 MID2Q9UJV3 735 aa12.3□□□□□ -0.44
CHMP3-204ENST00000409727 DUSP12Q9UNI6 340 aa12.3□□□□□ -0.44
CHMP3-204ENST00000409727 IGLV3-16A0A075B6K0 115 aa12.29□□□□□ -0.44
CHMP3-204ENST00000409727 TARM1B6A8C7 271 aa12.29□□□□□ -0.44
CHMP3-204ENST00000409727 CFAP99D6REC4 459 aa12.29□□□□□ -0.44
CHMP3-204ENST00000409727 CDC7O00311 574 aa12.29□□□□□ -0.44
CHMP3-204ENST00000409727 TSPAN6O43657 245 aa12.29□□□□□ -0.44
CHMP3-204ENST00000409727 ITM2AO43736 263 aa12.29□□□□□ -0.44
CHMP3-204ENST00000409727 TM7SF2O76062 418 aa12.29□□□□□ -0.44
CHMP3-204ENST00000409727 SOD1P00441 154 aa12.29□□□□□ -0.44
CHMP3-204ENST00000409727 OR56A5P0C7T3 313 aa12.29□□□□□ -0.44
CHMP3-204ENST00000409727 KITP10721 976 aa12.29□□□□□ -0.44
CHMP3-204ENST00000409727 ACADMP11310 421 aa12.29□□□□□ -0.44
CHMP3-204ENST00000409727 SLC26A3P40879 764 aa12.29□□□□□ -0.44
CHMP3-204ENST00000409727 CCDC15Q0P6D6 951 aa12.29□□□□□ -0.44
CHMP3-204ENST00000409727 PUS10Q3MIT2 529 aaKnown RBP12.29□□□□□ -0.44
CHMP3-204ENST00000409727 FBXO43Q4G163 708 aa12.29□□□□□ -0.44
CHMP3-204ENST00000409727 EOGTQ5NDL2 527 aa12.29□□□□□ -0.44
CHMP3-204ENST00000409727 PIWIL4Q7Z3Z4 852 aaKnown RBP12.29□□□□□ -0.44
CHMP3-204ENST00000409727 CYP2U1Q7Z449 544 aa12.29□□□□□ -0.44
CHMP3-204ENST00000409727 NKAPQ8N5F7 415 aaKnown RBP12.29□□□□□ -0.44
CHMP3-204ENST00000409727 PLA2G15Q8NCC3 412 aa12.29□□□□□ -0.44
CHMP3-204ENST00000409727 RDH11Q8TC12 318 aa12.29□□□□□ -0.44
CHMP3-204ENST00000409727 HMGB4Q8WW32 186 aa12.29□□□□□ -0.44
CHMP3-204ENST00000409727 PHF21BQ96EK2 531 aa12.29□□□□□ -0.44
CHMP3-204ENST00000409727 SEC16BQ96JE7 1060 aa12.29□□□□□ -0.44
CHMP3-204ENST00000409727 MRGPRX1Q96LB2 322 aa12.29□□□□□ -0.44
CHMP3-204ENST00000409727 DERL2Q9GZP9 239 aa12.29□□□□□ -0.44
CHMP3-204ENST00000409727 CD248Q9HCU0 757 aa12.29□□□□□ -0.44
CHMP3-204ENST00000409727 NPHS2Q9NP85 383 aa12.29□□□□□ -0.44
CHMP3-204ENST00000409727 OXSMQ9NWU1 459 aa12.29□□□□□ -0.44
CHMP3-204ENST00000409727 NFKBIL1Q9UBC1 381 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 175.9 ms