RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 SLC29A2Q14542 456 aa16.35■□□□□ 0.21
TSPAN4-208ENST00000409531 ITIH4Q14624 930 aa16.35■□□□□ 0.21
TSPAN4-208ENST00000409531 TYSND1Q2T9J0 566 aa16.35■□□□□ 0.21
TSPAN4-208ENST00000409531 KBTBD12Q3ZCT8 623 aa16.35■□□□□ 0.21
TSPAN4-208ENST00000409531 TEDDM1Q5T9Z0 273 aa16.35■□□□□ 0.21
TSPAN4-208ENST00000409531 ABI3BPQ7Z7G0 1075 aa16.35■□□□□ 0.21
TSPAN4-208ENST00000409531 GALNT7Q86SF2 657 aa16.35■□□□□ 0.21
TSPAN4-208ENST00000409531 SLC26A11Q86WA9 606 aa16.35■□□□□ 0.21
TSPAN4-208ENST00000409531 HEATR4Q86WZ0 1026 aa16.35■□□□□ 0.21
TSPAN4-208ENST00000409531 UNC5BQ8IZJ1 945 aa16.35■□□□□ 0.21
TSPAN4-208ENST00000409531 DDHD1Q8NEL9 900 aa16.35■□□□□ 0.21
TSPAN4-208ENST00000409531 COPS8Q99627 209 aa16.35■□□□□ 0.21
TSPAN4-208ENST00000409531 APOOQ9BUR5 198 aa16.35■□□□□ 0.21
TSPAN4-208ENST00000409531 TEX101Q9BY14 249 aa16.35■□□□□ 0.21
TSPAN4-208ENST00000409531 FAM96AQ9H5X1 160 aa16.35■□□□□ 0.21
TSPAN4-208ENST00000409531 IL21RQ9HBE5 538 aa16.35■□□□□ 0.21
TSPAN4-208ENST00000409531 INTS10Q9NVR2 710 aaKnown RBP16.35■□□□□ 0.21
TSPAN4-208ENST00000409531 TXNDC16Q9P2K2 825 aa16.35■□□□□ 0.21
TSPAN4-208ENST00000409531 RABGEF1Q9UJ41 708 aa16.35■□□□□ 0.21
TSPAN4-208ENST00000409531 FBXO5Q9UKT4 447 aa16.35■□□□□ 0.21
TSPAN4-208ENST00000409531 CABIN1Q9Y6J0 2220 aa16.34■□□□□ 0.21
TSPAN4-208ENST00000409531 POM121BA6NF01 834 aa16.34■□□□□ 0.21
TSPAN4-208ENST00000409531 CFAP99D6REC4 459 aa16.34■□□□□ 0.21
TSPAN4-208ENST00000409531 INPP4BO15327 924 aa16.34■□□□□ 0.21
TSPAN4-208ENST00000409531 NDUFS3O75489 264 aa16.34■□□□□ 0.21
TSPAN4-208ENST00000409531 KCNK5O95279 499 aa16.34■□□□□ 0.21
TSPAN4-208ENST00000409531 MYCLP1P12525 358 aaPredicted RBP16.34■□□□□ 0.21
TSPAN4-208ENST00000409531 KELP23276 732 aa16.34■□□□□ 0.21
TSPAN4-208ENST00000409531 HTR1BP28222 390 aa16.34■□□□□ 0.21
TSPAN4-208ENST00000409531 CLDN2P57739 230 aa16.34■□□□□ 0.21
TSPAN4-208ENST00000409531 KIAA1024LP59773 190 aa16.34■□□□□ 0.21
TSPAN4-208ENST00000409531 ZNF423Q2M1K9 1284 aa16.34■□□□□ 0.21
TSPAN4-208ENST00000409531 PPM1JQ5JR12 505 aa16.34■□□□□ 0.21
TSPAN4-208ENST00000409531 BEND6Q5SZJ8 279 aaPredicted RBP16.34■□□□□ 0.21
TSPAN4-208ENST00000409531 GPRC6AQ5T6X5 926 aa16.34■□□□□ 0.21
TSPAN4-208ENST00000409531 GCNT7Q6ZNI0 430 aa16.34■□□□□ 0.21
TSPAN4-208ENST00000409531 SERPINA9Q86WD7 417 aa16.34■□□□□ 0.21
TSPAN4-208ENST00000409531 LRRC6Q86X45 466 aa16.34■□□□□ 0.21
TSPAN4-208ENST00000409531 DCP2Q8IU60 420 aaKnown RBP16.34■□□□□ 0.21
TSPAN4-208ENST00000409531 CTAGE3PQ8IX95 158 aa16.34■□□□□ 0.21
TSPAN4-208ENST00000409531 PIANPQ8IYJ0 282 aa16.34■□□□□ 0.21
TSPAN4-208ENST00000409531 CNPY4Q8N129 248 aa16.34■□□□□ 0.21
TSPAN4-208ENST00000409531 PELI3Q8N2H9 469 aa16.34■□□□□ 0.21
TSPAN4-208ENST00000409531 C2CD4AQ8NCU7 369 aaPredicted RBP16.34■□□□□ 0.21
TSPAN4-208ENST00000409531 KLHDC7BQ96G42 594 aa16.34■□□□□ 0.21
TSPAN4-208ENST00000409531 DCUN1D1Q96GG9 259 aa16.34■□□□□ 0.21
TSPAN4-208ENST00000409531 COX14Q96I36 57 aa16.34■□□□□ 0.21
TSPAN4-208ENST00000409531 BMFQ96LC9 184 aa16.34■□□□□ 0.21
TSPAN4-208ENST00000409531 SLC32A1Q9H598 525 aa16.34■□□□□ 0.21
TSPAN4-208ENST00000409531 TM7SF3Q9NS93 570 aa16.34■□□□□ 0.21
TSPAN4-208ENST00000409531 ZDHHC3Q9NYG2 299 aa16.34■□□□□ 0.21
TSPAN4-208ENST00000409531 MARCH4Q9P2E8 410 aaPredicted RBP16.34■□□□□ 0.21
TSPAN4-208ENST00000409531 IKBKGQ9Y6K9 419 aa16.34■□□□□ 0.21
TSPAN4-208ENST00000409531 F8W8V4 182 aa16.33■□□□□ 0.2
TSPAN4-208ENST00000409531 H0Y8X5 98 aa16.33■□□□□ 0.2
TSPAN4-208ENST00000409531 GPR39O43194 453 aa16.33■□□□□ 0.2
TSPAN4-208ENST00000409531 CEACAM1P13688 526 aa16.33■□□□□ 0.2
TSPAN4-208ENST00000409531 H2AFXP16104 143 aaPredicted RBP16.33■□□□□ 0.2
TSPAN4-208ENST00000409531 ZNF7P17097 686 aaPredicted RBP16.33■□□□□ 0.2
TSPAN4-208ENST00000409531 MSH3P20585 1137 aa16.33■□□□□ 0.2
TSPAN4-208ENST00000409531 AKT1P31749 480 aa16.33■□□□□ 0.2
TSPAN4-208ENST00000409531 SLC1A2P43004 574 aa16.33■□□□□ 0.2
TSPAN4-208ENST00000409531 CDKN1CP49918 316 aaPredicted RBP16.33■□□□□ 0.2
TSPAN4-208ENST00000409531 THOP1P52888 689 aa16.33■□□□□ 0.2
TSPAN4-208ENST00000409531 NXPH1P58417 271 aa16.33■□□□□ 0.2
TSPAN4-208ENST00000409531 PFN3P60673 137 aa16.33■□□□□ 0.2
TSPAN4-208ENST00000409531 CTBP1Q13363 440 aa16.33■□□□□ 0.2
TSPAN4-208ENST00000409531 PTK2BQ14289 1009 aa16.33■□□□□ 0.2
TSPAN4-208ENST00000409531 SUZ12Q15022 739 aaKnown RBP16.33■□□□□ 0.2
TSPAN4-208ENST00000409531 SMAD1Q15797 465 aaKnown RBP16.33■□□□□ 0.2
TSPAN4-208ENST00000409531 UAP1Q16222 522 aaPredicted RBP16.33■□□□□ 0.2
TSPAN4-208ENST00000409531 DBN1Q16643 649 aa16.33■□□□□ 0.2
TSPAN4-208ENST00000409531 DBX2Q6ZNG2 339 aa16.33■□□□□ 0.2
TSPAN4-208ENST00000409531 MARK2Q7KZI7 788 aaKnown RBP16.33■□□□□ 0.2
TSPAN4-208ENST00000409531 PIP4P1Q86T03 277 aa16.33■□□□□ 0.2
TSPAN4-208ENST00000409531 RBFAQ8N0V3 343 aa16.33■□□□□ 0.2
TSPAN4-208ENST00000409531 ELF4Q99607 663 aaPredicted RBP16.33■□□□□ 0.2
TSPAN4-208ENST00000409531 CPNE1Q99829 537 aa16.33■□□□□ 0.2
TSPAN4-208ENST00000409531 EPB41L4BQ9H329 900 aa16.33■□□□□ 0.2
TSPAN4-208ENST00000409531 ERVMER34-1Q9H9K5 563 aa16.33■□□□□ 0.2
TSPAN4-208ENST00000409531 PPCSQ9HAB8 311 aa16.33■□□□□ 0.2
TSPAN4-208ENST00000409531 TRIM39Q9HCM9 518 aa16.33■□□□□ 0.2
TSPAN4-208ENST00000409531 VPS18Q9P253 973 aa16.33■□□□□ 0.2
TSPAN4-208ENST00000409531 CNOT6Q9ULM6 557 aaKnown RBP16.33■□□□□ 0.2
TSPAN4-208ENST00000409531 CA5BQ9Y2D0 317 aa16.33■□□□□ 0.2
TSPAN4-208ENST00000409531 OR1A2Q9Y585 309 aa16.33■□□□□ 0.2
TSPAN4-208ENST00000409531 PCDHGB2Q9Y5G2 931 aa16.33■□□□□ 0.2
TSPAN4-208ENST00000409531 SPTBN2O15020 2390 aa16.33■□□□□ 0.2
TSPAN4-208ENST00000409531 TP53BP1Q12888 1972 aaPredicted RBP16.33■□□□□ 0.2
TSPAN4-208ENST00000409531 PCNX2A6NKB5 2137 aa16.32■□□□□ 0.2
TSPAN4-208ENST00000409531 KMT2BQ9UMN6 2715 aaPredicted RBP16.32■□□□□ 0.2
TSPAN4-208ENST00000409531 IGLV3-16A0A075B6K0 115 aa16.32■□□□□ 0.2
TSPAN4-208ENST00000409531 EXOC1LA0A1B0GW35 172 aa16.32■□□□□ 0.2
TSPAN4-208ENST00000409531 GPR89AB7ZAQ6 455 aa16.32■□□□□ 0.2
TSPAN4-208ENST00000409531 QSOX1O00391 747 aa16.32■□□□□ 0.2
TSPAN4-208ENST00000409531 VEGFDO43915 354 aa16.32■□□□□ 0.2
TSPAN4-208ENST00000409531 IVLP07476 585 aa16.32■□□□□ 0.2
TSPAN4-208ENST00000409531 NUDT17P0C025 328 aa16.32■□□□□ 0.2
TSPAN4-208ENST00000409531 GPR89BP0CG08 455 aa16.32■□□□□ 0.2
TSPAN4-208ENST00000409531 PRSS56P0CW18 603 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms