RNA–Protein interactions for RNA: ENST00000409050.1

SCN1A-203, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 5,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-203ENST00000409050 OXR1Q8N573 874 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 FAM98AQ8NCA5 519 aaKnown RBP6.05□□□□□ -1.44
SCN1A-203ENST00000409050 DNAJB14Q8TBM8 379 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 C17orf50Q8WW18 174 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 EDEM1Q92611 657 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 OMDQ99983 421 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 FBXO6Q9NRD1 293 aaPredicted RBP6.05□□□□□ -1.44
SCN1A-203ENST00000409050 MTMR10Q9NXD2 777 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 MARK1Q9P0L2 795 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 FBXO10Q9UK96 956 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 NOS1APO75052 506 aaPredicted RBP6.05□□□□□ -1.44
SCN1A-203ENST00000409050 NDUFS2O75306 463 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 ARL6IP5O75915 188 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 OR5F1O95221 314 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 YES1P07947 543 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 SLC1A2P43004 574 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 CLK2P49760 499 aaKnown RBP6.05□□□□□ -1.44
SCN1A-203ENST00000409050 PDX1P52945 283 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 GRB14Q14449 540 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 SUZ12Q15022 739 aaKnown RBP6.05□□□□□ -1.44
SCN1A-203ENST00000409050 UBE2R2Q712K3 238 aaPredicted RBP6.05□□□□□ -1.44
SCN1A-203ENST00000409050 PIGWQ7Z7B1 504 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 FAM35AQ86V20 835 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 C11orf74Q86VG3 221 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 MARCH10Q8NA82 808 aaPredicted RBP6.05□□□□□ -1.44
SCN1A-203ENST00000409050 DNAJA4Q8WW22 397 aaPredicted RBP6.05□□□□□ -1.44
SCN1A-203ENST00000409050 DIRAS2Q96HU8 199 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 CNDP2Q96KP4 475 aaKnown RBP6.05□□□□□ -1.44
SCN1A-203ENST00000409050 ZNF354BQ96LW1 612 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 AGAP2Q99490 1192 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 SPATA9Q9BWV2 254 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 ALG2Q9H553 416 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 RERGLQ9H628 205 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 CXorf21Q9HAI6 301 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 IL17RBQ9NRM6 502 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 TRMT13Q9NUP7 481 aaKnown RBP6.05□□□□□ -1.44
SCN1A-203ENST00000409050 C22orf31O95567 290 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 MYCP01106 439 aaPredicted RBP6.05□□□□□ -1.44
SCN1A-203ENST00000409050 CHRM1P11229 460 aaPredicted RBP6.05□□□□□ -1.44
SCN1A-203ENST00000409050 PRKAR2AP13861 404 aaKnown RBP6.05□□□□□ -1.44
SCN1A-203ENST00000409050 CD247P20963 164 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 IDSP22304 550 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 MAPK3P27361 379 aaPredicted RBP6.05□□□□□ -1.44
SCN1A-203ENST00000409050 ICAM3P32942 547 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 ACSL1P33121 698 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 GLUD2P49448 558 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 TUSC3Q13454 348 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 CCNIQ14094 377 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 ZBED5Q49AG3 693 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 LDLRAP1Q5SW96 308 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 EGFLAMQ63HQ2 1017 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 ZNF730Q6ZMV8 503 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 SNX20Q7Z614 316 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 TFAP2DQ7Z6R9 452 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 KBTBD2Q8IY47 623 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 TTC29Q8NA56 475 aaPredicted RBP6.05□□□□□ -1.44
SCN1A-203ENST00000409050 HAVCR2Q8TDQ0 301 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 SLC22A18Q96BI1 424 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 C1GALT1C1Q96EU7 318 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 SH2D3AQ9BRG2 576 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 NIFKQ9BYG3 293 aaKnown RBP6.05□□□□□ -1.44
SCN1A-203ENST00000409050 ITM2CQ9NQX7 267 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 TFR2Q9UP52 801 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 POFUT2Q9Y2G5 429 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 USP20Q9Y2K6 914 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 TNS2Q63HR2 1409 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 ISPDA4D126 451 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 MATN3O15232 486 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 PI15O43692 258 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 MRPS14O60783 128 aaKnown RBP6.05□□□□□ -1.44
SCN1A-203ENST00000409050 PRAMEF12O95522 483 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 CHRNA5P30532 468 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 SEMA3AQ14563 771 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 AMHR2Q16671 573 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 DNAJC14Q6Y2X3 702 aaPredicted RBP6.05□□□□□ -1.44
SCN1A-203ENST00000409050 ZNF567Q8N184 647 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 P2RY11Q96G91 374 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 MTFR1LQ9H019 292 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 CAPN10Q9HC96 672 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 PRDM4Q9UKN5 801 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 FBXL21Q9UKT6 434 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 ST14Q9Y5Y6 855 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 CHD1O14646 1710 aa6.05□□□□□ -1.44
SCN1A-203ENST00000409050 DIP2CQ9Y2E4 1556 aa6.04□□□□□ -1.44
SCN1A-203ENST00000409050 A0A1B0GVM2 712 aa6.04□□□□□ -1.44
SCN1A-203ENST00000409050 TCAF2A6NFQ2 919 aa6.04□□□□□ -1.44
SCN1A-203ENST00000409050 CASTOR2A6NHX0 329 aa6.04□□□□□ -1.44
SCN1A-203ENST00000409050 ANKRD63C9JTQ0 380 aa6.04□□□□□ -1.44
SCN1A-203ENST00000409050 FAM189A1O60320 539 aa6.04□□□□□ -1.44
SCN1A-203ENST00000409050 ENTPD6O75354 484 aa6.04□□□□□ -1.44
SCN1A-203ENST00000409050 CD72P21854 359 aa6.04□□□□□ -1.44
SCN1A-203ENST00000409050 STOMP27105 288 aa6.04□□□□□ -1.44
SCN1A-203ENST00000409050 MC4RP32245 332 aa6.04□□□□□ -1.44
SCN1A-203ENST00000409050 CCR4P51679 360 aa6.04□□□□□ -1.44
SCN1A-203ENST00000409050 ITPK1Q13572 414 aa6.04□□□□□ -1.44
SCN1A-203ENST00000409050 SNAPC1Q16533 368 aa6.04□□□□□ -1.44
SCN1A-203ENST00000409050 SYT16Q17RD7 645 aa6.04□□□□□ -1.44
SCN1A-203ENST00000409050 PLEKHN1Q494U1 663 aaPredicted RBP6.04□□□□□ -1.44
SCN1A-203ENST00000409050 KCTD21Q4G0X4 260 aa6.04□□□□□ -1.44
SCN1A-203ENST00000409050 RAET1GQ6H3X3 334 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms