RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 PYGBP11216 843 aa20.23■□□□□ 0.83
CHKB-201ENST00000406938 ATP1B2P14415 290 aaPredicted RBP20.23■□□□□ 0.83
CHKB-201ENST00000406938 CSRP3P50461 194 aa20.23■□□□□ 0.83
CHKB-201ENST00000406938 RAB10P61026 200 aa20.23■□□□□ 0.83
CHKB-201ENST00000406938 TIAL1Q01085 375 aaKnown RBP eCLIP20.23■□□□□ 0.83
CHKB-201ENST00000406938 MACC1Q6ZN28 852 aa20.23■□□□□ 0.83
CHKB-201ENST00000406938 KCNJ9Q92806 393 aa20.23■□□□□ 0.83
CHKB-201ENST00000406938 TSPAN17Q96FV3 270 aa20.23■□□□□ 0.83
CHKB-201ENST00000406938 SMC6Q96SB8 1091 aa20.23■□□□□ 0.83
CHKB-201ENST00000406938 LGR4Q9BXB1 951 aa20.23■□□□□ 0.83
CHKB-201ENST00000406938 ZCCHC2Q9C0B9 1178 aaKnown RBP20.23■□□□□ 0.83
CHKB-201ENST00000406938 CA5BQ9Y2D0 317 aa20.23■□□□□ 0.83
CHKB-201ENST00000406938 DOCK9Q9BZ29 2069 aa20.22■□□□□ 0.83
CHKB-201ENST00000406938 RHOBTB1O94844 696 aa20.22■□□□□ 0.83
CHKB-201ENST00000406938 AKT2P31751 481 aa20.22■□□□□ 0.83
CHKB-201ENST00000406938 FNTBP49356 437 aa20.22■□□□□ 0.83
CHKB-201ENST00000406938 CLDN2P57739 230 aa20.22■□□□□ 0.83
CHKB-201ENST00000406938 RPL6Q02878 288 aaKnown RBP20.22■□□□□ 0.83
CHKB-201ENST00000406938 TMEM115Q12893 351 aaPredicted RBP20.22■□□□□ 0.83
CHKB-201ENST00000406938 PPM1JQ5JR12 505 aa20.22■□□□□ 0.83
CHKB-201ENST00000406938 SH2D5Q6ZV89 423 aa20.22■□□□□ 0.83
CHKB-201ENST00000406938 RAPH1Q70E73 1250 aa20.22■□□□□ 0.83
CHKB-201ENST00000406938 MTERF4Q7Z6M4 381 aaKnown RBP20.22■□□□□ 0.83
CHKB-201ENST00000406938 ADGRG6Q86SQ4 1221 aa20.22■□□□□ 0.83
CHKB-201ENST00000406938 MAML2Q8IZL2 1156 aaPredicted RBP20.22■□□□□ 0.83
CHKB-201ENST00000406938 FBXL6Q8N531 539 aa20.22■□□□□ 0.83
CHKB-201ENST00000406938 RASGEF1AQ8N9B8 481 aa20.22■□□□□ 0.83
CHKB-201ENST00000406938 LKAAEAR1Q8TD35 194 aa20.22■□□□□ 0.83
CHKB-201ENST00000406938 SNX19Q92543 992 aa20.22■□□□□ 0.83
CHKB-201ENST00000406938 FUBP1Q96AE4 644 aaKnown RBP20.22■□□□□ 0.83
CHKB-201ENST00000406938 PCED1AQ9H1Q7 454 aa20.22■□□□□ 0.83
CHKB-201ENST00000406938 OR2AG1Q9H205 316 aa20.22■□□□□ 0.83
CHKB-201ENST00000406938 TAS2R13Q9NYV9 303 aa20.22■□□□□ 0.83
CHKB-201ENST00000406938 POM121BA6NF01 834 aa20.21■□□□□ 0.83
CHKB-201ENST00000406938 E5RI56 91 aa20.21■□□□□ 0.83
CHKB-201ENST00000406938 H0Y8X5 98 aa20.21■□□□□ 0.83
CHKB-201ENST00000406938 H3BMM5 538 aa20.21■□□□□ 0.83
CHKB-201ENST00000406938 FPGTO14772 594 aa20.21■□□□□ 0.83
CHKB-201ENST00000406938 SLC35E2BP0CK96 405 aa20.21■□□□□ 0.83
CHKB-201ENST00000406938 MYCLP1P12525 358 aaPredicted RBP20.21■□□□□ 0.83
CHKB-201ENST00000406938 BCKDHBP21953 392 aa20.21■□□□□ 0.83
CHKB-201ENST00000406938 CCNFP41002 786 aa20.21■□□□□ 0.83
CHKB-201ENST00000406938 PDE1CQ14123 709 aaPredicted RBP20.21■□□□□ 0.83
CHKB-201ENST00000406938 GCNT7Q6ZNI0 430 aa20.21■□□□□ 0.83
CHKB-201ENST00000406938 SPNS2Q8IVW8 549 aa20.21■□□□□ 0.83
CHKB-201ENST00000406938 KRT222Q8N1A0 295 aa20.21■□□□□ 0.83
CHKB-201ENST00000406938 DTWD2Q8NBA8 298 aa20.21■□□□□ 0.83
CHKB-201ENST00000406938 TMEM145Q8NBT3 493 aa20.21■□□□□ 0.83
CHKB-201ENST00000406938 CADM4Q8NFZ8 388 aa20.21■□□□□ 0.83
CHKB-201ENST00000406938 ACMSDQ8TDX5 336 aa20.21■□□□□ 0.83
CHKB-201ENST00000406938 SGF29Q96ES7 293 aa20.21■□□□□ 0.83
CHKB-201ENST00000406938 VPS11Q9H270 941 aa20.21■□□□□ 0.83
CHKB-201ENST00000406938 TRIM39Q9HCM9 518 aa20.21■□□□□ 0.83
CHKB-201ENST00000406938 PHPT1Q9NRX4 125 aaPredicted RBP20.21■□□□□ 0.83
CHKB-201ENST00000406938 FAM53CQ9NYF3 392 aa20.21■□□□□ 0.83
CHKB-201ENST00000406938 DMTF1Q9Y222 760 aa20.21■□□□□ 0.83
CHKB-201ENST00000406938 PLXND1Q9Y4D7 1925 aa20.21■□□□□ 0.83
CHKB-201ENST00000406938 A0A096LPK6 155 aa20.2■□□□□ 0.82
CHKB-201ENST00000406938 OR2AG2A6NM03 316 aa20.2■□□□□ 0.82
CHKB-201ENST00000406938 SGTAO43765 313 aa20.2■□□□□ 0.82
CHKB-201ENST00000406938 VPS26AO75436 327 aa20.2■□□□□ 0.82
CHKB-201ENST00000406938 AP2A2O94973 939 aa20.2■□□□□ 0.82
CHKB-201ENST00000406938 C2P06681 752 aa20.2■□□□□ 0.82
CHKB-201ENST00000406938 OR56A5P0C7T3 313 aa20.2■□□□□ 0.82
CHKB-201ENST00000406938 CHRM3P20309 590 aa20.2■□□□□ 0.82
CHKB-201ENST00000406938 CRABP2P29373 138 aa20.2■□□□□ 0.82
CHKB-201ENST00000406938 HPDP32754 393 aaPredicted RBP20.2■□□□□ 0.82
CHKB-201ENST00000406938 NUDT1P36639 197 aa20.2■□□□□ 0.82
CHKB-201ENST00000406938 GMPRP36959 345 aa20.2■□□□□ 0.82
CHKB-201ENST00000406938 CTSCP53634 463 aa20.2■□□□□ 0.82
CHKB-201ENST00000406938 CSTF1Q05048 431 aaKnown RBP20.2■□□□□ 0.82
CHKB-201ENST00000406938 DOK6Q6PKX4 331 aa20.2■□□□□ 0.82
CHKB-201ENST00000406938 SLC36A4Q6YBV0 504 aa20.2■□□□□ 0.82
CHKB-201ENST00000406938 BMP8AQ7Z5Y6 402 aa20.2■□□□□ 0.82
CHKB-201ENST00000406938 DEFB119Q8N690 84 aa20.2■□□□□ 0.82
CHKB-201ENST00000406938 GPR21Q99679 349 aa20.2■□□□□ 0.82
CHKB-201ENST00000406938 ATXN10Q9UBB4 475 aa20.2■□□□□ 0.82
CHKB-201ENST00000406938 GALPQ9UBC7 116 aa20.2■□□□□ 0.82
CHKB-201ENST00000406938 TMEM98Q9Y2Y6 226 aa20.2■□□□□ 0.82
CHKB-201ENST00000406938 ZDBF2Q9HCK1 2354 aa20.2■□□□□ 0.82
CHKB-201ENST00000406938 A0A1W2PPC4 97 aa20.2■□□□□ 0.82
CHKB-201ENST00000406938 METTL12A8MUP2 240 aa20.2■□□□□ 0.82
CHKB-201ENST00000406938 PRAMEF26H0Y7S4 382 aa20.2■□□□□ 0.82
CHKB-201ENST00000406938 CDK14O94921 469 aa20.2■□□□□ 0.82
CHKB-201ENST00000406938 MPOP05164 745 aa20.2■□□□□ 0.82
CHKB-201ENST00000406938 BRAFP15056 766 aa20.2■□□□□ 0.82
CHKB-201ENST00000406938 ITGB6P18564 788 aa20.2■□□□□ 0.82
CHKB-201ENST00000406938 OAS2P29728 719 aaKnown RBP20.2■□□□□ 0.82
CHKB-201ENST00000406938 SLC18A2Q05940 514 aa20.2■□□□□ 0.82
CHKB-201ENST00000406938 PDAP1Q13442 181 aaKnown RBP20.2■□□□□ 0.82
CHKB-201ENST00000406938 TAF1BQ53T94 588 aaPredicted RBP20.2■□□□□ 0.82
CHKB-201ENST00000406938 WDR5BQ86VZ2 330 aa20.2■□□□□ 0.82
CHKB-201ENST00000406938 SIDT2Q8NBJ9 832 aaKnown RBP20.2■□□□□ 0.82
CHKB-201ENST00000406938 GIMAP7Q8NHV1 300 aa20.2■□□□□ 0.82
CHKB-201ENST00000406938 FOXJ1Q92949 421 aa20.2■□□□□ 0.82
CHKB-201ENST00000406938 ORAI3Q9BRQ5 295 aa20.2■□□□□ 0.82
CHKB-201ENST00000406938 APOOQ9BUR5 198 aa20.2■□□□□ 0.82
CHKB-201ENST00000406938 EPHX3Q9H6B9 360 aa20.2■□□□□ 0.82
CHKB-201ENST00000406938 POPDC3Q9HBV1 291 aa20.2■□□□□ 0.82
CHKB-201ENST00000406938 GPAMQ9HCL2 828 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms