RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 ASB8Q9H765 288 aa17.91■□□□□ 0.46
PTPRN2-204ENST00000404321 ETNK1Q9HBU6 452 aa17.91■□□□□ 0.46
PTPRN2-204ENST00000404321 ARNT2Q9HBZ2 717 aa17.91■□□□□ 0.46
PTPRN2-204ENST00000404321 KCNK4Q9NYG8 393 aa17.91■□□□□ 0.46
PTPRN2-204ENST00000404321 SCHIP1Q9P0W5 487 aaPredicted RBP17.91■□□□□ 0.46
PTPRN2-204ENST00000404321 RALYQ9UKM9 306 aaKnown RBP17.91■□□□□ 0.46
PTPRN2-204ENST00000404321 CCDC187A0A096LP49 1063 aa17.9■□□□□ 0.46
PTPRN2-204ENST00000404321 LDB2O43679 373 aa17.9■□□□□ 0.46
PTPRN2-204ENST00000404321 SRP72O76094 671 aaKnown RBP17.9■□□□□ 0.46
PTPRN2-204ENST00000404321 AP2A1O95782 977 aa17.9■□□□□ 0.46
PTPRN2-204ENST00000404321 F3P13726 295 aa17.9■□□□□ 0.46
PTPRN2-204ENST00000404321 MPSTP25325 297 aa17.9■□□□□ 0.46
PTPRN2-204ENST00000404321 RPL10P27635 214 aaKnown RBP17.9■□□□□ 0.46
PTPRN2-204ENST00000404321 RBMS1P29558 406 aaKnown RBP17.9■□□□□ 0.46
PTPRN2-204ENST00000404321 PBLDP30039 288 aaPredicted RBP17.9■□□□□ 0.46
PTPRN2-204ENST00000404321 CTSCP53634 463 aa17.9■□□□□ 0.46
PTPRN2-204ENST00000404321 DRG2P55039 364 aaKnown RBP17.9■□□□□ 0.46
PTPRN2-204ENST00000404321 HHEXQ03014 270 aa17.9■□□□□ 0.46
PTPRN2-204ENST00000404321 LONRF2Q1L5Z9 754 aa17.9■□□□□ 0.46
PTPRN2-204ENST00000404321 LDLRAP1Q5SW96 308 aa17.9■□□□□ 0.46
PTPRN2-204ENST00000404321 CCDC89Q8N998 374 aa17.9■□□□□ 0.46
PTPRN2-204ENST00000404321 DDHD1Q8NEL9 900 aa17.9■□□□□ 0.46
PTPRN2-204ENST00000404321 OR52K1Q8NGK4 314 aa17.9■□□□□ 0.46
PTPRN2-204ENST00000404321 WDR36Q8NI36 951 aaKnown RBP17.9■□□□□ 0.46
PTPRN2-204ENST00000404321 DTX3LQ8TDB6 740 aa17.9■□□□□ 0.46
PTPRN2-204ENST00000404321 FGF11Q92914 225 aa17.9■□□□□ 0.46
PTPRN2-204ENST00000404321 GRAMD1AQ96CP6 724 aa17.9■□□□□ 0.46
PTPRN2-204ENST00000404321 PRR11Q96HE9 360 aaPredicted RBP17.9■□□□□ 0.46
PTPRN2-204ENST00000404321 TMEM74Q96NL1 305 aa17.9■□□□□ 0.46
PTPRN2-204ENST00000404321 SLC38A3Q99624 504 aa17.9■□□□□ 0.46
PTPRN2-204ENST00000404321 ZCCHC2Q9C0B9 1178 aaKnown RBP17.9■□□□□ 0.46
PTPRN2-204ENST00000404321 STRADBQ9C0K7 418 aa17.9■□□□□ 0.46
PTPRN2-204ENST00000404321 ZMYND15Q9H091 742 aa17.9■□□□□ 0.46
PTPRN2-204ENST00000404321 COL27A1Q8IZC6 1860 aaPredicted RBP17.89■□□□□ 0.45
PTPRN2-204ENST00000404321 IGHV1OR21-1A0A087WYE8 117 aa17.89■□□□□ 0.45
PTPRN2-204ENST00000404321 TNFSF15O95150 251 aa17.89■□□□□ 0.45
PTPRN2-204ENST00000404321 CPNE6O95741 557 aa17.89■□□□□ 0.45
PTPRN2-204ENST00000404321 HOXB3P14651 431 aaPredicted RBP17.89■□□□□ 0.45
PTPRN2-204ENST00000404321 ITPKBP27987 946 aa17.89■□□□□ 0.45
PTPRN2-204ENST00000404321 MAPK9P45984 424 aa17.89■□□□□ 0.45
PTPRN2-204ENST00000404321 GPR3P46089 330 aa17.89■□□□□ 0.45
PTPRN2-204ENST00000404321 LMAN1P49257 510 aa17.89■□□□□ 0.45
PTPRN2-204ENST00000404321 XIAPP98170 497 aa17.89■□□□□ 0.45
PTPRN2-204ENST00000404321 CCDC173Q0VFZ6 552 aa17.89■□□□□ 0.45
PTPRN2-204ENST00000404321 NR1D2Q14995 579 aa17.89■□□□□ 0.45
PTPRN2-204ENST00000404321 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.89■□□□□ 0.45
PTPRN2-204ENST00000404321 RAB11FIP2Q7L804 512 aa17.89■□□□□ 0.45
PTPRN2-204ENST00000404321 C11orf96Q7Z7L8 435 aa17.89■□□□□ 0.45
PTPRN2-204ENST00000404321 PIM3Q86V86 326 aa17.89■□□□□ 0.45
PTPRN2-204ENST00000404321 SLITRK4Q8IW52 837 aa17.89■□□□□ 0.45
PTPRN2-204ENST00000404321 CCDC97Q96F63 343 aaPredicted RBP17.89■□□□□ 0.45
PTPRN2-204ENST00000404321 LIN37Q96GY3 246 aaPredicted RBP17.89■□□□□ 0.45
PTPRN2-204ENST00000404321 TIMM29Q9BSF4 260 aa17.89■□□□□ 0.45
PTPRN2-204ENST00000404321 KCNF1Q9H3M0 494 aa17.89■□□□□ 0.45
PTPRN2-204ENST00000404321 ASCL3Q9NQ33 180 aa17.89■□□□□ 0.45
PTPRN2-204ENST00000404321 RAB6BQ9NRW1 208 aa17.89■□□□□ 0.45
PTPRN2-204ENST00000404321 FEZ2Q9UHY8 353 aaPredicted RBP17.89■□□□□ 0.45
PTPRN2-204ENST00000404321 CRLS1Q9UJA2 301 aa17.89■□□□□ 0.45
PTPRN2-204ENST00000404321 ARHGEF17Q96PE2 2063 aaPredicted RBP17.88■□□□□ 0.45
PTPRN2-204ENST00000404321 ZFHX4Q86UP3 3567 aa17.88■□□□□ 0.45
PTPRN2-204ENST00000404321 E7EVH7 732 aa17.88■□□□□ 0.45
PTPRN2-204ENST00000404321 PLD2O14939 933 aa17.88■□□□□ 0.45
PTPRN2-204ENST00000404321 PSMD3O43242 534 aa17.88■□□□□ 0.45
PTPRN2-204ENST00000404321 ZW10O43264 779 aa17.88■□□□□ 0.45
PTPRN2-204ENST00000404321 MSH3P20585 1137 aa17.88■□□□□ 0.45
PTPRN2-204ENST00000404321 CCKBRP32239 447 aa17.88■□□□□ 0.45
PTPRN2-204ENST00000404321 CSF2RBP32927 897 aa17.88■□□□□ 0.45
PTPRN2-204ENST00000404321 EIF2S3P41091 472 aaKnown RBP17.88■□□□□ 0.45
PTPRN2-204ENST00000404321 GRIA1P42261 906 aa17.88■□□□□ 0.45
PTPRN2-204ENST00000404321 FASLGP48023 281 aa17.88■□□□□ 0.45
PTPRN2-204ENST00000404321 PDE1BQ01064 536 aa17.88■□□□□ 0.45
PTPRN2-204ENST00000404321 ZFP36L1Q07352 338 aaKnown RBP17.88■□□□□ 0.45
PTPRN2-204ENST00000404321 CCNG2Q16589 344 aa17.88■□□□□ 0.45
PTPRN2-204ENST00000404321 COL28A1Q2UY09 1125 aa17.88■□□□□ 0.45
PTPRN2-204ENST00000404321 CCDC38Q502W7 563 aa17.88■□□□□ 0.45
PTPRN2-204ENST00000404321 FNBP1LQ5T0N5 605 aa17.88■□□□□ 0.45
PTPRN2-204ENST00000404321 TMEM220Q6QAJ8 160 aa17.88■□□□□ 0.45
PTPRN2-204ENST00000404321 ZNF574Q6ZN55 896 aaPredicted RBP17.88■□□□□ 0.45
PTPRN2-204ENST00000404321 SLC9B2Q86UD5 537 aa17.88■□□□□ 0.45
PTPRN2-204ENST00000404321 LSMEM2Q8N112 164 aa17.88■□□□□ 0.45
PTPRN2-204ENST00000404321 FBXO39Q8N4B4 442 aa17.88■□□□□ 0.45
PTPRN2-204ENST00000404321 BEND7Q8N7W2 519 aaPredicted RBP17.88■□□□□ 0.45
PTPRN2-204ENST00000404321 DNAAF3Q8N9W5 541 aa17.88■□□□□ 0.45
PTPRN2-204ENST00000404321 RCBTB1Q8NDN9 531 aa17.88■□□□□ 0.45
PTPRN2-204ENST00000404321 SGF29Q96ES7 293 aa17.88■□□□□ 0.45
PTPRN2-204ENST00000404321 SLC46A1Q96NT5 459 aa17.88■□□□□ 0.45
PTPRN2-204ENST00000404321 SARS2Q9NP81 518 aaKnown RBP17.88■□□□□ 0.45
PTPRN2-204ENST00000404321 SMOXQ9NWM0 555 aa17.88■□□□□ 0.45
PTPRN2-204ENST00000404321 TMEM9Q9P0T7 183 aa17.88■□□□□ 0.45
PTPRN2-204ENST00000404321 CPNE7Q9UBL6 633 aa17.88■□□□□ 0.45
PTPRN2-204ENST00000404321 FAM8A1Q9UBU6 413 aa17.88■□□□□ 0.45
PTPRN2-204ENST00000404321 PISDQ9UG56 409 aa17.88■□□□□ 0.45
PTPRN2-204ENST00000404321 LOXL2Q9Y4K0 774 aa17.88■□□□□ 0.45
PTPRN2-204ENST00000404321 SCN8AQ9UQD0 1980 aa17.87■□□□□ 0.45
PTPRN2-204ENST00000404321 PRAMEF33A0A0G2JMD5 474 aa17.87■□□□□ 0.45
PTPRN2-204ENST00000404321 OR52A4PA6NMU1 304 aa17.87■□□□□ 0.45
PTPRN2-204ENST00000404321 POP7O75817 140 aaKnown RBP17.87■□□□□ 0.45
PTPRN2-204ENST00000404321 DXOO77932 396 aaKnown RBP17.87■□□□□ 0.45
PTPRN2-204ENST00000404321 PRSS56P0CW18 603 aa17.87■□□□□ 0.45
PTPRN2-204ENST00000404321 SLC2A4P14672 509 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms