RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 HOXD13P35453 343 aa5.01□□□□□ -1.61
HMGB3P19-201ENST00000403971 UBA7P41226 1012 aa5.01□□□□□ -1.61
HMGB3P19-201ENST00000403971 AMTP48728 403 aa5.01□□□□□ -1.61
HMGB3P19-201ENST00000403971 PCYT1AP49585 367 aa5.01□□□□□ -1.61
HMGB3P19-201ENST00000403971 NAP1L1P55209 391 aaKnown RBP5.01□□□□□ -1.61
HMGB3P19-201ENST00000403971 USP41Q3LFD5 358 aa5.01□□□□□ -1.61
HMGB3P19-201ENST00000403971 SUSD4Q5VX71 490 aa5.01□□□□□ -1.61
HMGB3P19-201ENST00000403971 PQLC2Q6ZP29 291 aa5.01□□□□□ -1.61
HMGB3P19-201ENST00000403971 RND1Q92730 232 aa5.01□□□□□ -1.61
HMGB3P19-201ENST00000403971 IGSF8Q969P0 613 aa5.01□□□□□ -1.61
HMGB3P19-201ENST00000403971 ARHGEF26Q96DR7 871 aa5.01□□□□□ -1.61
HMGB3P19-201ENST00000403971 HAUS8Q9BT25 410 aa5.01□□□□□ -1.61
HMGB3P19-201ENST00000403971 UTP14AQ9BVJ6 771 aaKnown RBP5.01□□□□□ -1.61
HMGB3P19-201ENST00000403971 SF3B5Q9BWJ5 86 aaKnown RBP5.01□□□□□ -1.61
HMGB3P19-201ENST00000403971 TMX4Q9H1E5 349 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P19-201ENST00000403971 NDST4Q9H3R1 872 aa5.01□□□□□ -1.61
HMGB3P19-201ENST00000403971 HINT3Q9NQE9 182 aaKnown RBP5.01□□□□□ -1.61
HMGB3P19-201ENST00000403971 TRMT112Q9UI30 125 aaKnown RBP5.01□□□□□ -1.61
HMGB3P19-201ENST00000403971 FBXO2Q9UK22 296 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P19-201ENST00000403971 MYO6Q9UM54 1294 aa5.01□□□□□ -1.61
HMGB3P19-201ENST00000403971 ERVK-11Q9UQG0 969 aa5.01□□□□□ -1.61
HMGB3P19-201ENST00000403971 MYH13Q9UKX3 1938 aa5□□□□□ -1.61
HMGB3P19-201ENST00000403971 VILLO15195 856 aa5□□□□□ -1.61
HMGB3P19-201ENST00000403971 OR2C1O95371 312 aa5□□□□□ -1.61
HMGB3P19-201ENST00000403971 BMP15O95972 392 aa5□□□□□ -1.61
HMGB3P19-201ENST00000403971 IGHDP01880 384 aa5□□□□□ -1.61
HMGB3P19-201ENST00000403971 LDHCP07864 332 aa5□□□□□ -1.61
HMGB3P19-201ENST00000403971 CDH2P19022 906 aaPredicted RBP5□□□□□ -1.61
HMGB3P19-201ENST00000403971 LMO1P25800 156 aa5□□□□□ -1.61
HMGB3P19-201ENST00000403971 HNRNPH1P31943 449 aaKnown RBP5□□□□□ -1.61
HMGB3P19-201ENST00000403971 PGGT1BP53609 377 aa5□□□□□ -1.61
HMGB3P19-201ENST00000403971 GALCP54803 685 aa5□□□□□ -1.61
HMGB3P19-201ENST00000403971 PAPPA-AS1Q5QFB9 102 aa5□□□□□ -1.61
HMGB3P19-201ENST00000403971 SPATA1Q5VX52 437 aa5□□□□□ -1.61
HMGB3P19-201ENST00000403971 CHST9Q7L1S5 443 aa5□□□□□ -1.61
HMGB3P19-201ENST00000403971 ZC3HC1Q86WB0 502 aaKnown RBP5□□□□□ -1.61
HMGB3P19-201ENST00000403971 SPATA6LQ8N4H0 392 aa5□□□□□ -1.61
HMGB3P19-201ENST00000403971 TMEM68Q96MH6 324 aa5□□□□□ -1.61
HMGB3P19-201ENST00000403971 IFIH1Q9BYX4 1025 aaKnown RBP5□□□□□ -1.61
HMGB3P19-201ENST00000403971 PDZD7Q9H5P4 517 aa5□□□□□ -1.61
HMGB3P19-201ENST00000403971 BICC1Q9H694 974 aaKnown RBP5□□□□□ -1.61
HMGB3P19-201ENST00000403971 SH2D4AQ9H788 454 aa5□□□□□ -1.61
HMGB3P19-201ENST00000403971 PPP1R3EQ9H7J1 279 aa5□□□□□ -1.61
HMGB3P19-201ENST00000403971 HIF1ANQ9NWT6 349 aa5□□□□□ -1.61
HMGB3P19-201ENST00000403971 SLC9A2Q9UBY0 812 aa5□□□□□ -1.61
HMGB3P19-201ENST00000403971 ADD3Q9UEY8 706 aaKnown RBP5□□□□□ -1.61
HMGB3P19-201ENST00000403971 VPS28Q9UK41 221 aa5□□□□□ -1.61
HMGB3P19-201ENST00000403971 ZNF215Q9UL58 517 aaPredicted RBP5□□□□□ -1.61
HMGB3P19-201ENST00000403971 PAM16Q9Y3D7 125 aa5□□□□□ -1.61
HMGB3P19-201ENST00000403971 LRP5O75197 1615 aa5□□□□□ -1.61
HMGB3P19-201ENST00000403971 BRCA1P38398 1863 aaKnown RBP5□□□□□ -1.61
HMGB3P19-201ENST00000403971 MYH7P12883 1935 aa4.99□□□□□ -1.61
HMGB3P19-201ENST00000403971 TNRC6CQ9HCJ0 1690 aaKnown RBP4.99□□□□□ -1.61
HMGB3P19-201ENST00000403971 TRIP12Q14669 1992 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P19-201ENST00000403971 LINC01553A4QN01 128 aa4.99□□□□□ -1.61
HMGB3P19-201ENST00000403971 MYMKA6NI61 221 aa4.99□□□□□ -1.61
HMGB3P19-201ENST00000403971 AGAP14A8MT82 685 aa4.99□□□□□ -1.61
HMGB3P19-201ENST00000403971 A8MZ25 164 aa4.99□□□□□ -1.61
HMGB3P19-201ENST00000403971 WNT9BO14905 357 aa4.99□□□□□ -1.61
HMGB3P19-201ENST00000403971 SLC25A12O75746 678 aa4.99□□□□□ -1.61
HMGB3P19-201ENST00000403971 CH25HO95992 272 aa4.99□□□□□ -1.61
HMGB3P19-201ENST00000403971 SERPINB2P05120 415 aa4.99□□□□□ -1.61
HMGB3P19-201ENST00000403971 CLTBP09497 229 aa4.99□□□□□ -1.61
HMGB3P19-201ENST00000403971 CD58P19256 250 aa4.99□□□□□ -1.61
HMGB3P19-201ENST00000403971 MAOAP21397 527 aa4.99□□□□□ -1.61
HMGB3P19-201ENST00000403971 MCM3P25205 808 aa4.99□□□□□ -1.61
HMGB3P19-201ENST00000403971 C21orf33P30042 268 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P19-201ENST00000403971 METAP2P50579 478 aaKnown RBP eCLIP4.99□□□□□ -1.61
HMGB3P19-201ENST00000403971 CDH8P55286 799 aa4.99□□□□□ -1.61
HMGB3P19-201ENST00000403971 NLRP5P59047 1200 aa4.99□□□□□ -1.61
HMGB3P19-201ENST00000403971 MC1RQ01726 317 aa4.99□□□□□ -1.61
HMGB3P19-201ENST00000403971 BNC1Q01954 994 aa4.99□□□□□ -1.61
HMGB3P19-201ENST00000403971 CREB5Q02930 508 aa4.99□□□□□ -1.61
HMGB3P19-201ENST00000403971 TRAF3Q13114 568 aa4.99□□□□□ -1.61
HMGB3P19-201ENST00000403971 KIAA0930Q6ICG6 404 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P19-201ENST00000403971 PLEKHA7Q6IQ23 1121 aa4.99□□□□□ -1.61
HMGB3P19-201ENST00000403971 GLDNQ6ZMI3 551 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P19-201ENST00000403971 SMIM5Q71RC9 77 aa4.99□□□□□ -1.61
HMGB3P19-201ENST00000403971 SZRD1Q7Z422 152 aa4.99□□□□□ -1.61
HMGB3P19-201ENST00000403971 NBPF5PQ86XG9 351 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P19-201ENST00000403971 ERC1Q8IUD2 1116 aa4.99□□□□□ -1.61
HMGB3P19-201ENST00000403971 FOXRED2Q8IWF2 684 aa4.99□□□□□ -1.61
HMGB3P19-201ENST00000403971 OR14A16Q8NHC5 309 aa4.99□□□□□ -1.61
HMGB3P19-201ENST00000403971 NSMCE1Q8WV22 266 aa4.99□□□□□ -1.61
HMGB3P19-201ENST00000403971 POMGNT1Q8WZA1 660 aa4.99□□□□□ -1.61
HMGB3P19-201ENST00000403971 ZBTB9Q96C00 473 aa4.99□□□□□ -1.61
HMGB3P19-201ENST00000403971 RRNAD1Q96FB5 475 aaKnown RBP4.99□□□□□ -1.61
HMGB3P19-201ENST00000403971 ELMOD3Q96FG2 381 aa4.99□□□□□ -1.61
HMGB3P19-201ENST00000403971 LRFN5Q96NI6 719 aa4.99□□□□□ -1.61
HMGB3P19-201ENST00000403971 SYNCQ9H7C4 482 aa4.99□□□□□ -1.61
HMGB3P19-201ENST00000403971 NOX4Q9NPH5 578 aa4.99□□□□□ -1.61
HMGB3P19-201ENST00000403971 CNGB3Q9NQW8 809 aa4.99□□□□□ -1.61
HMGB3P19-201ENST00000403971 SLC45A1Q9Y2W3 748 aa4.99□□□□□ -1.61
HMGB3P19-201ENST00000403971 MAU2Q9Y6X3 613 aa4.99□□□□□ -1.61
HMGB3P19-201ENST00000403971 LRRC37AA6NMS7 1700 aa4.99□□□□□ -1.61
HMGB3P19-201ENST00000403971 ARAP2Q8WZ64 1704 aa4.99□□□□□ -1.61
HMGB3P19-201ENST00000403971 CHD4Q14839 1912 aa4.99□□□□□ -1.61
HMGB3P19-201ENST00000403971 AKAP11Q9UKA4 1901 aa4.98□□□□□ -1.61
HMGB3P19-201ENST00000403971 hDV102S1A0JD36 115 aa4.98□□□□□ -1.61
HMGB3P19-201ENST00000403971 FAM90A10PA6NDY2 464 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms