RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 NXPE1Q8N323 547 aa18.93■□□□□ 0.62
RTN4-207ENST00000402434 SFRP1Q8N474 314 aa18.93■□□□□ 0.62
RTN4-207ENST00000402434 WDR48Q8TAF3 677 aa18.93■□□□□ 0.62
RTN4-207ENST00000402434 GRK7Q8WTQ7 553 aa18.93■□□□□ 0.62
RTN4-207ENST00000402434 PATE1Q8WXA2 126 aa18.93■□□□□ 0.62
RTN4-207ENST00000402434 PEX13Q92968 403 aa18.93■□□□□ 0.62
RTN4-207ENST00000402434 KLC4Q9NSK0 619 aa18.93■□□□□ 0.62
RTN4-207ENST00000402434 CLCA2Q9UQC9 943 aa18.93■□□□□ 0.62
RTN4-207ENST00000402434 DNMT3AQ9Y6K1 912 aaPredicted RBP18.93■□□□□ 0.62
RTN4-207ENST00000402434 SLC30A1Q9Y6M5 507 aa18.93■□□□□ 0.62
RTN4-207ENST00000402434 RNF215Q9Y6U7 377 aa18.93■□□□□ 0.62
RTN4-207ENST00000402434 UNC13CQ8NB66 2214 aa18.93■□□□□ 0.62
RTN4-207ENST00000402434 NTN3O00634 580 aaPredicted RBP18.92■□□□□ 0.62
RTN4-207ENST00000402434 KCNJ13O60928 360 aa18.92■□□□□ 0.62
RTN4-207ENST00000402434 EML2O95834 649 aa18.92■□□□□ 0.62
RTN4-207ENST00000402434 MT-CO3P00414 261 aa18.92■□□□□ 0.62
RTN4-207ENST00000402434 VPS41P49754 854 aa18.92■□□□□ 0.62
RTN4-207ENST00000402434 ARSDP51689 593 aa18.92■□□□□ 0.62
RTN4-207ENST00000402434 CTSCP53634 463 aa18.92■□□□□ 0.62
RTN4-207ENST00000402434 MAZP56270 477 aaKnown RBP18.92■□□□□ 0.62
RTN4-207ENST00000402434 TARDBPQ13148 414 aaKnown RBP eCLIP18.92■□□□□ 0.623e-9■■■■■ 47
RTN4-207ENST00000402434 NR1D2Q14995 579 aa18.92■□□□□ 0.62
RTN4-207ENST00000402434 TSTD2Q5T7W7 516 aa18.92■□□□□ 0.62
RTN4-207ENST00000402434 IYDQ6PHW0 289 aa18.92■□□□□ 0.62
RTN4-207ENST00000402434 ZNF534Q76KX8 674 aa18.92■□□□□ 0.62
RTN4-207ENST00000402434 ZNF438Q7Z4V0 828 aa18.92■□□□□ 0.62
RTN4-207ENST00000402434 C17orf53Q8N3J3 647 aaPredicted RBP18.92■□□□□ 0.62
RTN4-207ENST00000402434 OR13J1Q8NGT2 312 aa18.92■□□□□ 0.62
RTN4-207ENST00000402434 SLCO2A1Q92959 643 aa18.92■□□□□ 0.62
RTN4-207ENST00000402434 ZNF514Q96K75 400 aaPredicted RBP18.92■□□□□ 0.62
RTN4-207ENST00000402434 ZNF778Q96MU6 729 aa18.92■□□□□ 0.62
RTN4-207ENST00000402434 RNF14Q9UBS8 474 aa18.92■□□□□ 0.62
RTN4-207ENST00000402434 CRLS1Q9UJA2 301 aa18.92■□□□□ 0.62
RTN4-207ENST00000402434 IGLV3-16A0A075B6K0 115 aa18.91■□□□□ 0.62
RTN4-207ENST00000402434 TCRBV7S3A2A0A539 114 aa18.91■□□□□ 0.62
RTN4-207ENST00000402434 TCEA3O75764 348 aa18.91■□□□□ 0.62
RTN4-207ENST00000402434 MSH3P20585 1137 aa18.91■□□□□ 0.62
RTN4-207ENST00000402434 FASLGP48023 281 aa18.91■□□□□ 0.62
RTN4-207ENST00000402434 NPY2RP49146 381 aa18.91■□□□□ 0.62
RTN4-207ENST00000402434 CDKN1CP49918 316 aaPredicted RBP18.91■□□□□ 0.62
RTN4-207ENST00000402434 B4GALNT1Q00973 533 aa18.91■□□□□ 0.62
RTN4-207ENST00000402434 CACNG1Q06432 222 aa18.91■□□□□ 0.62
RTN4-207ENST00000402434 INSCQ1MX18 579 aa18.91■□□□□ 0.62
RTN4-207ENST00000402434 PCID2Q5JVF3 399 aa18.91■□□□□ 0.62
RTN4-207ENST00000402434 LRRC8BQ6P9F7 803 aa18.91■□□□□ 0.62
RTN4-207ENST00000402434 TMEM220Q6QAJ8 160 aa18.91■□□□□ 0.62
RTN4-207ENST00000402434 TRAPPC5Q8IUR0 188 aa18.91■□□□□ 0.62
RTN4-207ENST00000402434 HEXDCQ8WVB3 486 aa18.91■□□□□ 0.62
RTN4-207ENST00000402434 CPT1BQ92523 772 aa18.91■□□□□ 0.62
RTN4-207ENST00000402434 IL22Q9GZX6 179 aa18.91■□□□□ 0.62
RTN4-207ENST00000402434 FAM96AQ9H5X1 160 aa18.91■□□□□ 0.62
RTN4-207ENST00000402434 PCYOX1Q9UHG3 505 aa18.91■□□□□ 0.62
RTN4-207ENST00000402434 TCAF1Q9Y4C2 921 aa18.91■□□□□ 0.62
RTN4-207ENST00000402434 FRYQ5TBA9 3013 aa18.91■□□□□ 0.62
RTN4-207ENST00000402434 CCDC78A2IDD5 438 aa18.9■□□□□ 0.62
RTN4-207ENST00000402434 CASC3O15234 703 aaKnown RBP18.9■□□□□ 0.62
RTN4-207ENST00000402434 F3P13726 295 aa18.9■□□□□ 0.62
RTN4-207ENST00000402434 AKT1P31749 480 aa18.9■□□□□ 0.62
RTN4-207ENST00000402434 ETF1P62495 437 aaKnown RBP18.9■□□□□ 0.62
RTN4-207ENST00000402434 DMPKQ09013 629 aa18.9■□□□□ 0.62
RTN4-207ENST00000402434 ZRANB3Q5FWF4 1079 aa18.9■□□□□ 0.62
RTN4-207ENST00000402434 PIANPQ8IYJ0 282 aa18.9■□□□□ 0.62
RTN4-207ENST00000402434 SLC37A2Q8TED4 501 aa18.9■□□□□ 0.62
RTN4-207ENST00000402434 SGF29Q96ES7 293 aa18.9■□□□□ 0.62
RTN4-207ENST00000402434 SGSM3Q96HU1 749 aa18.9■□□□□ 0.62
RTN4-207ENST00000402434 CAPZA3Q96KX2 299 aa18.9■□□□□ 0.62
RTN4-207ENST00000402434 COPS8Q99627 209 aa18.9■□□□□ 0.62
RTN4-207ENST00000402434 DDX47Q9H0S4 455 aaKnown RBP18.9■□□□□ 0.62
RTN4-207ENST00000402434 BFARQ9NZS9 450 aa18.9■□□□□ 0.62
RTN4-207ENST00000402434 KIR2DS5A0A0G2JLQ3 304 aa18.9■□□□□ 0.62
RTN4-207ENST00000402434 A0A0G2JNG1 304 aa18.9■□□□□ 0.62
RTN4-207ENST00000402434 A0A1W2PQM1 296 aa18.9■□□□□ 0.62
RTN4-207ENST00000402434 CCDC162PA2VCL2 907 aa18.9■□□□□ 0.62
RTN4-207ENST00000402434 OR2AG2A6NM03 316 aa18.9■□□□□ 0.62
RTN4-207ENST00000402434 OR5K4A6NMS3 321 aa18.9■□□□□ 0.62
RTN4-207ENST00000402434 KIR2DS3K7RE56 304 aa18.9■□□□□ 0.62
RTN4-207ENST00000402434 PPM1DO15297 605 aa18.9■□□□□ 0.62
RTN4-207ENST00000402434 SGTAO43765 313 aa18.9■□□□□ 0.62
RTN4-207ENST00000402434 POP7O75817 140 aaKnown RBP18.9■□□□□ 0.62
RTN4-207ENST00000402434 SLC2A4P14672 509 aa18.9■□□□□ 0.62
RTN4-207ENST00000402434 VCLP18206 1134 aa18.9■□□□□ 0.62
RTN4-207ENST00000402434 ACRV1P26436 265 aa18.9■□□□□ 0.62
RTN4-207ENST00000402434 GPR3P46089 330 aa18.9■□□□□ 0.62
RTN4-207ENST00000402434 SESN2P58004 480 aaPredicted RBP18.9■□□□□ 0.62
RTN4-207ENST00000402434 CCL7P80098 99 aa18.9■□□□□ 0.62
RTN4-207ENST00000402434 KIR2DS5Q14953 304 aa18.9■□□□□ 0.62
RTN4-207ENST00000402434 UNQ6494/PRO21346Q6UXR6 183 aa18.9■□□□□ 0.62
RTN4-207ENST00000402434 WASH2PQ6VEQ5 465 aa18.9■□□□□ 0.62
RTN4-207ENST00000402434 MICALCLQ6ZW33 695 aa18.9■□□□□ 0.62
RTN4-207ENST00000402434 SPRED1Q7Z699 444 aa18.9■□□□□ 0.62
RTN4-207ENST00000402434 AMZ2Q86W34 360 aa18.9■□□□□ 0.62
RTN4-207ENST00000402434 SERPINA9Q86WD7 417 aa18.9■□□□□ 0.62
RTN4-207ENST00000402434 CCNJLQ8IV13 435 aa18.9■□□□□ 0.62
RTN4-207ENST00000402434 PPHLN1Q8NEY8 458 aaKnown RBP18.9■□□□□ 0.62
RTN4-207ENST00000402434 HDAC10Q969S8 669 aa18.9■□□□□ 0.62
RTN4-207ENST00000402434 CCDC97Q96F63 343 aaPredicted RBP18.9■□□□□ 0.62
RTN4-207ENST00000402434 DEPDC7Q96QD5 511 aa18.9■□□□□ 0.62
RTN4-207ENST00000402434 LRRN3Q9H3W5 708 aa18.9■□□□□ 0.62
RTN4-207ENST00000402434 WASH6PQ9NQA3 447 aa18.9■□□□□ 0.62
RTN4-207ENST00000402434 PRDM8Q9NQV8 689 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms