RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 PPP2R3CQ969Q6 453 aa3.9□□□□□ -1.78
CLHC1-201ENST00000401408 SPDL1Q96EA4 605 aa3.9□□□□□ -1.78
CLHC1-201ENST00000401408 ELMO2Q96JJ3 720 aa3.9□□□□□ -1.78
CLHC1-201ENST00000401408 CEP19Q96LK0 163 aa3.9□□□□□ -1.78
CLHC1-201ENST00000401408 FBXL18Q96ME1 805 aa3.9□□□□□ -1.78
CLHC1-201ENST00000401408 NECTIN4Q96NY8 510 aa3.9□□□□□ -1.78
CLHC1-201ENST00000401408 WDFY2Q96P53 400 aa3.9□□□□□ -1.78
CLHC1-201ENST00000401408 EFHD1Q9BUP0 239 aa3.9□□□□□ -1.78
CLHC1-201ENST00000401408 ZNF416Q9BWM5 594 aa3.9□□□□□ -1.78
CLHC1-201ENST00000401408 C1QTNF3Q9BXJ4 246 aa3.9□□□□□ -1.78
CLHC1-201ENST00000401408 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.9□□□□□ -1.787e-9■■■■■ 29.1
CLHC1-201ENST00000401408 ECT2Q9H8V3 914 aa3.9□□□□□ -1.78
CLHC1-201ENST00000401408 UNKLQ9H9P5 680 aaKnown RBP3.9□□□□□ -1.78
CLHC1-201ENST00000401408 POLR1BQ9H9Y6 1135 aa3.9□□□□□ -1.78
CLHC1-201ENST00000401408 IL20RAQ9UHF4 553 aa3.9□□□□□ -1.78
CLHC1-201ENST00000401408 PLCL2Q9UPR0 1127 aa3.9□□□□□ -1.78
CLHC1-201ENST00000401408 PLEKHA6Q9Y2H5 1048 aa3.9□□□□□ -1.78
CLHC1-201ENST00000401408 PCDHA1Q9Y5I3 950 aa3.9□□□□□ -1.78
CLHC1-201ENST00000401408 SRPRBQ9Y5M8 271 aaKnown RBP3.9□□□□□ -1.78
CLHC1-201ENST00000401408 SNX14Q9Y5W7 946 aa3.9□□□□□ -1.78
CLHC1-201ENST00000401408 STON1Q9Y6Q2 735 aa3.9□□□□□ -1.78
CLHC1-201ENST00000401408 MYH3P11055 1940 aa3.9□□□□□ -1.78
CLHC1-201ENST00000401408 SPEF2Q9C093 1822 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 ZZEF1O43149 2961 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 HTR3EA5X5Y0 456 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 DBX1A6NMT0 343 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 SUPT3HB4E1H0 165 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 LGALS8O00214 317 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 PIK3R2O00459 728 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 CYR61O00622 381 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 WNT9AO14904 365 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 NOBOXO60393 691 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 KRT36O76013 467 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 UFL1O94874 794 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 LDLRP01130 860 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 ZNF888P0CJ79 500 aaPredicted RBP3.9□□□□□ -1.79
CLHC1-201ENST00000401408 PNMA6AP0CW24 399 aaPredicted RBP3.9□□□□□ -1.79
CLHC1-201ENST00000401408 IL1R1P14778 569 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 EZRP15311 586 aaKnown RBP3.9□□□□□ -1.79
CLHC1-201ENST00000401408 ATF2P15336 505 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 CTRB1P17538 263 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 EGR1P18146 543 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 MCAMP43121 646 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 SLC11A2P49281 568 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 FLT3LGP49771 235 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 ARHGDIAP52565 204 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 THOP1P52888 689 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 MFAP4P55083 255 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 MTTPP55157 894 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 LGALS4P56470 323 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 GPX6P59796 221 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 GPLD1P80108 840 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 PCDH1Q08174 1060 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 MALLQ13021 153 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 TUSC3Q13454 348 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 DYRK1AQ13627 763 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 VGLL4Q14135 290 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 SGCAQ16586 387 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 DPY19L1Q2PZI1 675 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 TMEM119Q4V9L6 283 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 HIKESHIQ53FT3 197 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 KLHL26Q53HC5 615 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 FAM76BQ5HYJ3 339 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 GCNT6Q5T4J0 391 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 RAP1GAP2Q684P5 730 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 SPECC1LQ69YQ0 1117 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 CTRB2Q6GPI1 263 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 WDR88Q6ZMY6 472 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 ZC3H18Q86VM9 953 aaKnown RBP3.9□□□□□ -1.79
CLHC1-201ENST00000401408 FAM129CQ86XR2 697 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 SERPINA12Q8IW75 414 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 GPR65Q8IYL9 337 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 UNC5BQ8IZJ1 945 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 CCNYL1Q8N7R7 359 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 ZNF366Q8N895 744 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 C12orf50Q8NA57 414 aaPredicted RBP3.9□□□□□ -1.79
CLHC1-201ENST00000401408 DBF4BQ8NFT6 615 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 RAET1EQ8TD07 263 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 PANK1Q8TE04 598 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 TSEN15Q8WW01 171 aaKnown RBP3.9□□□□□ -1.79
CLHC1-201ENST00000401408 RLN3Q8WXF3 142 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 POMGNT1Q8WZA1 660 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 LARP4BQ92615 738 aaKnown RBP3.9□□□□□ -1.79
CLHC1-201ENST00000401408 ZNF707Q96C28 371 aaPredicted RBP3.9□□□□□ -1.79
CLHC1-201ENST00000401408 SLC41A2Q96JW4 573 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 LINC00615Q96LM1 132 aaPredicted RBP3.9□□□□□ -1.79
CLHC1-201ENST00000401408 CIB1Q99828 191 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 C11orf70Q9BRQ4 267 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 TDRD3Q9H7E2 651 aaKnown RBP3.9□□□□□ -1.79
CLHC1-201ENST00000401408 PANK3Q9H999 370 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 C12orf10Q9HB07 376 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 PANK4Q9NVE7 773 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 FAM118AQ9NWS6 357 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 RCOR3Q9P2K3 495 aaPredicted RBP3.9□□□□□ -1.79
CLHC1-201ENST00000401408 SLC7A8Q9UHI5 535 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 TRMT6Q9UJA5 497 aaKnown RBP3.9□□□□□ -1.79
CLHC1-201ENST00000401408 ADAM30Q9UKF2 790 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 STAP1Q9ULZ2 295 aa3.9□□□□□ -1.79
CLHC1-201ENST00000401408 MRPS7Q9Y2R9 242 aaKnown RBP3.9□□□□□ -1.79
CLHC1-201ENST00000401408 PCDHAC2Q9Y5I4 1007 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms