RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 GIMAP4Q9NUV9 329 aa16.95■□□□□ 0.3
PTPRA-205ENST00000399903 DKK3Q9UBP4 350 aa16.95■□□□□ 0.3
PTPRA-205ENST00000399903 FBXO5Q9UKT4 447 aa16.95■□□□□ 0.3
PTPRA-205ENST00000399903 FZD10Q9ULW2 581 aa16.95■□□□□ 0.3
PTPRA-205ENST00000399903 UGT2A1Q9Y4X1 527 aa16.95■□□□□ 0.3
PTPRA-205ENST00000399903 TRIM64A6NGJ6 449 aa16.94■□□□□ 0.3
PTPRA-205ENST00000399903 ZNF99A8MXY4 864 aaPredicted RBP16.94■□□□□ 0.3
PTPRA-205ENST00000399903 RFPL2O75678 378 aa16.94■□□□□ 0.3
PTPRA-205ENST00000399903 SOAT2O75908 522 aa16.94■□□□□ 0.3
PTPRA-205ENST00000399903 F2P00734 622 aa16.94■□□□□ 0.3
PTPRA-205ENST00000399903 HTR1AP08908 422 aa16.94■□□□□ 0.3
PTPRA-205ENST00000399903 DBTP11182 482 aaKnown RBP16.94■□□□□ 0.3
PTPRA-205ENST00000399903 CD40LGP29965 261 aa16.94■□□□□ 0.3
PTPRA-205ENST00000399903 CLK1P49759 484 aaKnown RBP16.94■□□□□ 0.3
PTPRA-205ENST00000399903 CBLBQ13191 982 aa16.94■□□□□ 0.3
PTPRA-205ENST00000399903 CTF1Q16619 201 aa16.94■□□□□ 0.3
PTPRA-205ENST00000399903 CTU2Q2VPK5 515 aaKnown RBP16.94■□□□□ 0.3
PTPRA-205ENST00000399903 FAM209AQ5JX71 171 aa16.94■□□□□ 0.3
PTPRA-205ENST00000399903 LARP4Q71RC2 724 aaKnown RBP eCLIP16.94■□□□□ 0.32e-6■□□□□ 8.1
PTPRA-205ENST00000399903 ITFG1Q8TB96 612 aa16.94■□□□□ 0.3
PTPRA-205ENST00000399903 GAD1Q99259 594 aa16.94■□□□□ 0.3
PTPRA-205ENST00000399903 CRYL1Q9Y2S2 319 aa16.94■□□□□ 0.3
PTPRA-205ENST00000399903 FTH1P02794 183 aa16.94■□□□□ 0.3
PTPRA-205ENST00000399903 HADHAP40939 763 aa16.94■□□□□ 0.3
PTPRA-205ENST00000399903 NPY2RP49146 381 aa16.94■□□□□ 0.3
PTPRA-205ENST00000399903 PFKFB4Q16877 469 aa16.94■□□□□ 0.3
PTPRA-205ENST00000399903 DESI1Q6ICB0 168 aa16.94■□□□□ 0.3
PTPRA-205ENST00000399903 PIM3Q86V86 326 aa16.94■□□□□ 0.3
PTPRA-205ENST00000399903 FAM83FQ8NEG4 500 aaPredicted RBP16.94■□□□□ 0.3
PTPRA-205ENST00000399903 MCOLN3Q8TDD5 553 aa16.94■□□□□ 0.3
PTPRA-205ENST00000399903 ANKRD49Q8WVL7 239 aa16.94■□□□□ 0.3
PTPRA-205ENST00000399903 ATL1Q8WXF7 558 aa16.94■□□□□ 0.3
PTPRA-205ENST00000399903 FKBP10Q96AY3 582 aa16.94■□□□□ 0.3
PTPRA-205ENST00000399903 HBEGFQ99075 208 aa16.94■□□□□ 0.3
PTPRA-205ENST00000399903 PLEKHA5Q9HAU0 1116 aa16.94■□□□□ 0.3
PTPRA-205ENST00000399903 NCF1BA6NI72 391 aaPredicted RBP16.93■□□□□ 0.3
PTPRA-205ENST00000399903 NCF1CA8MVU1 366 aaPredicted RBP16.93■□□□□ 0.3
PTPRA-205ENST00000399903 G3V2T6 193 aa16.93■□□□□ 0.3
PTPRA-205ENST00000399903 NUAK1O60285 661 aa16.93■□□□□ 0.3
PTPRA-205ENST00000399903 ZNF865P0CJ78 1059 aaPredicted RBP16.93■□□□□ 0.3
PTPRA-205ENST00000399903 NCF1P14598 390 aaPredicted RBP16.93■□□□□ 0.3
PTPRA-205ENST00000399903 CHRNB3Q05901 458 aa16.93■□□□□ 0.3
PTPRA-205ENST00000399903 MAP2K5Q13163 448 aa16.93■□□□□ 0.3
PTPRA-205ENST00000399903 KCNAB2Q13303 367 aa16.93■□□□□ 0.3
PTPRA-205ENST00000399903 SIM2Q14190 667 aaPredicted RBP16.93■□□□□ 0.3
PTPRA-205ENST00000399903 SYPL2Q5VXT5 272 aa16.93■□□□□ 0.3
PTPRA-205ENST00000399903 OSTM1Q86WC4 334 aa16.93■□□□□ 0.3
PTPRA-205ENST00000399903 TWIST2Q8WVJ9 160 aa16.93■□□□□ 0.3
PTPRA-205ENST00000399903 WNT8BQ93098 351 aa16.93■□□□□ 0.3
PTPRA-205ENST00000399903 PAAF1Q9BRP4 392 aa16.93■□□□□ 0.3
PTPRA-205ENST00000399903 YTHDF1Q9BYJ9 559 aaKnown RBP16.93■□□□□ 0.3
PTPRA-205ENST00000399903 ARHGAP39Q9C0H5 1083 aa16.93■□□□□ 0.3
PTPRA-205ENST00000399903 IL37Q9NZH6 218 aa16.93■□□□□ 0.3
PTPRA-205ENST00000399903 IPPQ9Y573 584 aa16.93■□□□□ 0.3
PTPRA-205ENST00000399903 DNAJC15Q9Y5T4 150 aa16.93■□□□□ 0.3
PTPRA-205ENST00000399903 GSTA4O15217 222 aa16.93■□□□□ 0.3
PTPRA-205ENST00000399903 TOMM70O94826 608 aa16.93■□□□□ 0.3
PTPRA-205ENST00000399903 KCNC1P48547 511 aa16.93■□□□□ 0.3
PTPRA-205ENST00000399903 ALDH7A1P49419 539 aaKnown RBP16.93■□□□□ 0.3
PTPRA-205ENST00000399903 ALDH3A2P51648 485 aa16.93■□□□□ 0.3
PTPRA-205ENST00000399903 SNX16P57768 344 aa16.93■□□□□ 0.3
PTPRA-205ENST00000399903 TRIP4Q15650 581 aaPredicted RBP16.93■□□□□ 0.3
PTPRA-205ENST00000399903 WSCD1Q658N2 575 aa16.93■□□□□ 0.3
PTPRA-205ENST00000399903 NAPEPLDQ6IQ20 393 aa16.93■□□□□ 0.3
PTPRA-205ENST00000399903 PRMT9Q6P2P2 845 aa16.93■□□□□ 0.3
PTPRA-205ENST00000399903 NPWQ8N729 165 aa16.93■□□□□ 0.3
PTPRA-205ENST00000399903 CHDHQ8NE62 594 aaPredicted RBP16.93■□□□□ 0.3
PTPRA-205ENST00000399903 TEX37Q96LM6 180 aa16.93■□□□□ 0.3
PTPRA-205ENST00000399903 CDK5RAP1Q96SZ6 601 aaKnown RBP16.93■□□□□ 0.3
PTPRA-205ENST00000399903 TBCDQ9BTW9 1192 aa16.93■□□□□ 0.3
PTPRA-205ENST00000399903 SIK2Q9H0K1 926 aa16.93■□□□□ 0.3
PTPRA-205ENST00000399903 SEMA4BQ9NPR2 832 aaPredicted RBP16.93■□□□□ 0.3
PTPRA-205ENST00000399903 GMIPQ9P107 970 aa16.93■□□□□ 0.3
PTPRA-205ENST00000399903 ERVK-18Q9QC07 812 aa16.93■□□□□ 0.3
PTPRA-205ENST00000399903 NRCAMQ92823 1304 aa16.93■□□□□ 0.3
PTPRA-205ENST00000399903 MAGEB16A2A368 324 aa16.93■□□□□ 0.3
PTPRA-205ENST00000399903 CHRNB1P11230 501 aa16.93■□□□□ 0.3
PTPRA-205ENST00000399903 ARPP19P56211 112 aa16.93■□□□□ 0.3
PTPRA-205ENST00000399903 SYT16Q17RD7 645 aa16.93■□□□□ 0.3
PTPRA-205ENST00000399903 DCAF4L1Q3SXM0 396 aa16.93■□□□□ 0.3
PTPRA-205ENST00000399903 TXNDC11Q6PKC3 985 aa16.93■□□□□ 0.3
PTPRA-205ENST00000399903 USP51Q70EK9 711 aa16.93■□□□□ 0.3
PTPRA-205ENST00000399903 P2RY8Q86VZ1 359 aa16.93■□□□□ 0.3
PTPRA-205ENST00000399903 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.93■□□□□ 0.3
PTPRA-205ENST00000399903 RNF34Q969K3 372 aa16.93■□□□□ 0.3
PTPRA-205ENST00000399903 CITED4Q96RK1 184 aa16.93■□□□□ 0.3
PTPRA-205ENST00000399903 FSD1LQ9BXM9 530 aa16.93■□□□□ 0.3
PTPRA-205ENST00000399903 USP3Q9Y6I4 520 aa16.93■□□□□ 0.3
PTPRA-205ENST00000399903 HSD17B1P14061 328 aa16.92■□□□□ 0.3
PTPRA-205ENST00000399903 SH3BP2P78314 561 aa16.92■□□□□ 0.3
PTPRA-205ENST00000399903 GNASQ5JWF2 1037 aa16.92■□□□□ 0.3
PTPRA-205ENST00000399903 RBM23Q86U06 439 aaKnown RBP16.92■□□□□ 0.3
PTPRA-205ENST00000399903 SLC22A15Q8IZD6 547 aa16.92■□□□□ 0.3
PTPRA-205ENST00000399903 MFSD4AQ8N468 514 aa16.92■□□□□ 0.3
PTPRA-205ENST00000399903 PTGR2Q8N8N7 351 aaPredicted RBP16.92■□□□□ 0.3
PTPRA-205ENST00000399903 FRS2Q8WU20 508 aa16.92■□□□□ 0.3
PTPRA-205ENST00000399903 AP5M1Q9H0R1 490 aa16.92■□□□□ 0.3
PTPRA-205ENST00000399903 ADPRHL2Q9NX46 363 aa16.92■□□□□ 0.3
PTPRA-205ENST00000399903 VWA7Q9Y334 891 aa16.92■□□□□ 0.3
PTPRA-205ENST00000399903 COL1A2P08123 1366 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms