RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 STMND1H3BQB6 276 aa4.89□□□□□ -1.63
SMAD4-202ENST00000398417 DUSP11O75319 330 aaKnown RBP4.89□□□□□ -1.63
SMAD4-202ENST00000398417 SLC22A3O75751 556 aa4.89□□□□□ -1.63
SMAD4-202ENST00000398417 FGF1P05230 155 aa4.89□□□□□ -1.63
SMAD4-202ENST00000398417 FCGR1AP12314 374 aa4.89□□□□□ -1.63
SMAD4-202ENST00000398417 OGNP20774 298 aaKnown RBP4.89□□□□□ -1.63
SMAD4-202ENST00000398417 LSM3P62310 102 aaKnown RBP4.89□□□□□ -1.63
SMAD4-202ENST00000398417 BNC1Q01954 994 aa4.89□□□□□ -1.63
SMAD4-202ENST00000398417 PIGFQ07326 219 aa4.89□□□□□ -1.63
SMAD4-202ENST00000398417 FAM126BQ8IXS8 530 aa4.89□□□□□ -1.63
SMAD4-202ENST00000398417 MARVELD2Q8N4S9 558 aa4.89□□□□□ -1.63
SMAD4-202ENST00000398417 TRPV1Q8NER1 839 aa4.89□□□□□ -1.63
SMAD4-202ENST00000398417 GRIN3AQ8TCU5 1115 aa4.89□□□□□ -1.63
SMAD4-202ENST00000398417 BIRC7Q96CA5 298 aa4.89□□□□□ -1.63
SMAD4-202ENST00000398417 MYEOVQ96EZ4 313 aa4.89□□□□□ -1.63
SMAD4-202ENST00000398417 HOPXQ9BPY8 73 aaPredicted RBP4.89□□□□□ -1.63
SMAD4-202ENST00000398417 CHID1Q9BWS9 393 aa4.89□□□□□ -1.63
SMAD4-202ENST00000398417 SMOC2Q9H3U7 446 aa4.89□□□□□ -1.63
SMAD4-202ENST00000398417 VPS4AQ9UN37 437 aa4.89□□□□□ -1.63
SMAD4-202ENST00000398417 DNAJC15Q9Y5T4 150 aa4.89□□□□□ -1.63
SMAD4-202ENST00000398417 PRSS51A0A1B0GVH4 220 aa4.89□□□□□ -1.63
SMAD4-202ENST00000398417 OR6C75A6NL08 312 aa4.89□□□□□ -1.63
SMAD4-202ENST00000398417 SOCS2O14508 198 aa4.89□□□□□ -1.63
SMAD4-202ENST00000398417 MUSKO15146 869 aa4.89□□□□□ -1.63
SMAD4-202ENST00000398417 PRAMEF11O60813 436 aa4.89□□□□□ -1.63
SMAD4-202ENST00000398417 SLC25A14O95258 325 aaPredicted RBP4.89□□□□□ -1.63
SMAD4-202ENST00000398417 ZNF682O95780 498 aa4.89□□□□□ -1.63
SMAD4-202ENST00000398417 AKT1P31749 480 aa4.89□□□□□ -1.63
SMAD4-202ENST00000398417 GSK3BP49841 420 aa4.89□□□□□ -1.63
SMAD4-202ENST00000398417 GNA12Q03113 381 aa4.89□□□□□ -1.63
SMAD4-202ENST00000398417 TNK2Q07912 1038 aa4.89□□□□□ -1.63
SMAD4-202ENST00000398417 LSAMPQ13449 338 aa4.89□□□□□ -1.63
SMAD4-202ENST00000398417 SERINC3Q13530 473 aa4.89□□□□□ -1.63
SMAD4-202ENST00000398417 VARS2Q5ST30 1063 aaKnown RBP4.89□□□□□ -1.63
SMAD4-202ENST00000398417 KANK2Q63ZY3 851 aa4.89□□□□□ -1.63
SMAD4-202ENST00000398417 RIN3Q8TB24 985 aa4.89□□□□□ -1.63
SMAD4-202ENST00000398417 IMP4Q96G21 291 aaKnown RBP4.89□□□□□ -1.63
SMAD4-202ENST00000398417 ASB2Q96Q27 587 aa4.89□□□□□ -1.63
SMAD4-202ENST00000398417 FERD3LQ96RJ6 166 aa4.89□□□□□ -1.63
SMAD4-202ENST00000398417 ASB8Q9H765 288 aa4.89□□□□□ -1.63
SMAD4-202ENST00000398417 MEAF6Q9HAF1 191 aa4.89□□□□□ -1.63
SMAD4-202ENST00000398417 CD84Q9UIB8 345 aa4.89□□□□□ -1.63
SMAD4-202ENST00000398417 SPTBP11277 2137 aa4.89□□□□□ -1.63
SMAD4-202ENST00000398417 TTC3P53804 2025 aa4.89□□□□□ -1.63
SMAD4-202ENST00000398417 A0A087WXM4 84 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 BTN3A3O00478 584 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 NME4O00746 187 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 PDE9AO76083 593 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 XPAP23025 273 aaPredicted RBP4.88□□□□□ -1.63
SMAD4-202ENST00000398417 GDF5P43026 501 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 DNAJB13P59910 316 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 IL2P60568 153 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 OCA2Q04671 838 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 CDH18Q13634 790 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 ISCA2Q86U28 154 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 DENND6BQ8NEG7 585 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 C8orf48Q96LL4 319 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 PPM1MQ96MI6 270 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 CLPBQ9H078 707 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 CLK4Q9HAZ1 481 aaKnown RBP4.88□□□□□ -1.63
SMAD4-202ENST00000398417 VPS45Q9NRW7 570 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 TREX1Q9NSU2 369 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 AIG1Q9NVV5 245 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 POLR3BQ9NW08 1133 aaPredicted RBP4.88□□□□□ -1.63
SMAD4-202ENST00000398417 SCHIP1Q9P0W5 487 aaPredicted RBP4.88□□□□□ -1.63
SMAD4-202ENST00000398417 RIMS3Q9UJD0 308 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 TLR6Q9Y2C9 796 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 Q9Y3F1 56 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 RGPD5Q99666 1765 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 A0A0D9SEW6 157 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 VPS4BO75351 444 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 TRMUO75648 421 aaKnown RBP4.88□□□□□ -1.63
SMAD4-202ENST00000398417 GPX3P22352 226 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 ATP5C1P36542 298 aaKnown RBP4.88□□□□□ -1.63
SMAD4-202ENST00000398417 RPL26P61254 145 aaKnown RBP4.88□□□□□ -1.63
SMAD4-202ENST00000398417 CYP4F8P98187 520 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 MERTKQ12866 999 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 VEPH1Q14D04 833 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 MSANTD2Q6P1R3 559 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 PRR23BQ6ZRT6 265 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 RNF180Q86T96 592 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 RETREG3Q86VR2 466 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 PELI3Q8N2H9 469 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 SNX19Q92543 992 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 RANBP9Q96S59 729 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 SLC30A3Q99726 388 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 SGIP1Q9BQI5 828 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 TNKS2Q9H2K2 1166 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 ZFP14Q9HCL3 533 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 INTS7Q9NVH2 962 aaKnown RBP4.88□□□□□ -1.63
SMAD4-202ENST00000398417 CEPT1Q9Y6K0 416 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 TYW5A2RUC4 315 aaKnown RBP4.88□□□□□ -1.63
SMAD4-202ENST00000398417 SLC22A2O15244 555 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 SEPT4O43236 478 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 TPD52L2O43399 206 aaKnown RBP4.88□□□□□ -1.63
SMAD4-202ENST00000398417 NOBOXO60393 691 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 RPS9P46781 194 aaKnown RBP4.88□□□□□ -1.63
SMAD4-202ENST00000398417 SH3BP2P78314 561 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 HMGCS1Q01581 520 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 LRP8Q14114 963 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms