RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 AAK1Q2M2I8 961 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 AP5B1Q2VPB7 878 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 SLC44A4Q53GD3 710 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 BEND5Q7L4P6 421 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 ANKRD46Q86W74 232 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 APCDD1Q8J025 514 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 MYO19Q96H55 970 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 YME1L1Q96TA2 773 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 TDRD1Q9BXT4 1180 aaKnown RBP10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 ING2Q9H160 280 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 LIN28AQ9H9Z2 209 aaKnown RBP10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 HTTP42858 3142 aa10.33□□□□□ -0.76
CPSF1P1-201ENST00000397477 UPK3BL1B0FP48 263 aa10.33□□□□□ -0.76
CPSF1P1-201ENST00000397477 UPK3BL2E5RIL1 263 aa10.33□□□□□ -0.76
CPSF1P1-201ENST00000397477 TNFAIP8O95379 198 aa10.33□□□□□ -0.76
CPSF1P1-201ENST00000397477 PGS1Q32NB8 556 aa10.33□□□□□ -0.76
CPSF1P1-201ENST00000397477 ZNF366Q8N895 744 aa10.33□□□□□ -0.76
CPSF1P1-201ENST00000397477 CREBZFQ9NS37 354 aa10.33□□□□□ -0.76
CPSF1P1-201ENST00000397477 GON4LQ3T8J9 2241 aa10.33□□□□□ -0.76
CPSF1P1-201ENST00000397477 ARHGAP10A1A4S6 786 aa10.33□□□□□ -0.76
CPSF1P1-201ENST00000397477 HOXA2O43364 376 aa10.33□□□□□ -0.76
CPSF1P1-201ENST00000397477 KERAO60938 352 aa10.33□□□□□ -0.76
CPSF1P1-201ENST00000397477 ATP6V0D1P61421 351 aa10.33□□□□□ -0.76
CPSF1P1-201ENST00000397477 IRX1P78414 480 aaPredicted RBP10.33□□□□□ -0.76
CPSF1P1-201ENST00000397477 IRF5Q13568 498 aa10.33□□□□□ -0.76
CPSF1P1-201ENST00000397477 AARS2Q5JTZ9 985 aaKnown RBP10.33□□□□□ -0.76
CPSF1P1-201ENST00000397477 ZNF697Q5TEC3 545 aa10.33□□□□□ -0.76
CPSF1P1-201ENST00000397477 ARMC3Q5W041 872 aa10.33□□□□□ -0.76
CPSF1P1-201ENST00000397477 RETSATQ6NUM9 610 aa10.33□□□□□ -0.76
CPSF1P1-201ENST00000397477 OTOP2Q7RTS6 562 aa10.33□□□□□ -0.76
CPSF1P1-201ENST00000397477 CPSF7Q8N684 471 aaKnown RBP10.33□□□□□ -0.76
CPSF1P1-201ENST00000397477 OR2T34Q8NGX1 318 aa10.33□□□□□ -0.76
CPSF1P1-201ENST00000397477 OR2T3Q8NH03 318 aa10.33□□□□□ -0.76
CPSF1P1-201ENST00000397477 KIAA1191Q96A73 305 aa10.33□□□□□ -0.76
CPSF1P1-201ENST00000397477 CCDC90BQ9GZT6 254 aa10.33□□□□□ -0.76
CPSF1P1-201ENST00000397477 TFB2MQ9H5Q4 396 aaKnown RBP10.33□□□□□ -0.76
CPSF1P1-201ENST00000397477 INTS7Q9NVH2 962 aaKnown RBP10.33□□□□□ -0.76
CPSF1P1-201ENST00000397477 ARL15Q9NXU5 204 aa10.33□□□□□ -0.76
CPSF1P1-201ENST00000397477 VPS51Q9UID3 782 aa10.33□□□□□ -0.76
CPSF1P1-201ENST00000397477 A0A1W2PRU2 124 aa10.33□□□□□ -0.76
CPSF1P1-201ENST00000397477 NME4O00746 187 aa10.33□□□□□ -0.76
CPSF1P1-201ENST00000397477 CASQ2O14958 399 aaPredicted RBP10.33□□□□□ -0.76
CPSF1P1-201ENST00000397477 KDELR3O43731 214 aa10.33□□□□□ -0.76
CPSF1P1-201ENST00000397477 LRG1P02750 347 aa10.33□□□□□ -0.76
CPSF1P1-201ENST00000397477 UGT2B4P06133 528 aa10.33□□□□□ -0.76
CPSF1P1-201ENST00000397477 RECQLP46063 649 aaPredicted RBP10.33□□□□□ -0.76
CPSF1P1-201ENST00000397477 POLR2JP52435 117 aaKnown RBP10.33□□□□□ -0.76
CPSF1P1-201ENST00000397477 TGFBIQ15582 683 aa10.33□□□□□ -0.76
CPSF1P1-201ENST00000397477 TMEM214Q6NUQ4 689 aaKnown RBP10.33□□□□□ -0.76
CPSF1P1-201ENST00000397477 FUNDC1Q8IVP5 155 aa10.33□□□□□ -0.76
CPSF1P1-201ENST00000397477 ADCY4Q8NFM4 1077 aa10.33□□□□□ -0.76
CPSF1P1-201ENST00000397477 FUBP1Q96AE4 644 aaKnown RBP10.33□□□□□ -0.76
CPSF1P1-201ENST00000397477 LRRC58Q96CX6 371 aa10.33□□□□□ -0.76
CPSF1P1-201ENST00000397477 TEX37Q96LM6 180 aa10.33□□□□□ -0.76
CPSF1P1-201ENST00000397477 NLE1Q9NVX2 485 aaPredicted RBP10.33□□□□□ -0.76
CPSF1P1-201ENST00000397477 VPS9D1Q9Y2B5 631 aa10.33□□□□□ -0.76
CPSF1P1-201ENST00000397477 U3KQV3 271 aa10.33□□□□□ -0.76
CPSF1P1-201ENST00000397477 DRGXA6NNA5 263 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 WASH4PA8MWX3 477 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 IDO1P14902 403 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 OGNP20774 298 aaKnown RBP10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 YAP1P46937 504 aaKnown RBP10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 TLE2Q04725 743 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 HERC3Q15034 1050 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 NADK2Q4G0N4 442 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 OGFRL1Q5TC84 451 aaPredicted RBP10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 LARP4Q71RC2 724 aaKnown RBP eCLIP10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 CHST15Q7LFX5 561 aaPredicted RBP10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 STK32CQ86UX6 486 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 CMTM8Q8IZV2 173 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 SCML4Q8N228 414 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 TSPAN14Q8NG11 270 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 WFDC5Q8TCV5 224 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 ZNF483Q8TF39 744 aaPredicted RBP10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 DPF3Q92784 378 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 ABTB1Q969K4 478 aaPredicted RBP10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 SDCCAG3Q96C92 435 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 SPATA16Q9BXB7 569 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 ATG10Q9H0Y0 220 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 TUBB1Q9H4B7 451 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 ALG2Q9H553 416 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 TMEM39AQ9NV64 488 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 OPTCQ9UBM4 332 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 LIMD1Q9UGP4 676 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 ZNF711Q9Y462 761 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 FAM155AB1AL88 458 aaPredicted RBP10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 RAD51BO15315 384 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 G6PDP11413 515 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 MTHFD2P13995 350 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 ADSLP30566 484 aaPredicted RBP10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 NEK2P51955 445 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 RHDQ02161 417 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 LRP8Q14114 963 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 IKBKEQ14164 716 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 NEDD8Q15843 81 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 PAGE3Q5JUK9 113 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 AFMIDQ63HM1 303 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 TSPAN33Q86UF1 283 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 SLC15A3Q8IY34 581 aa10.32□□□□□ -0.76
CPSF1P1-201ENST00000397477 RMND5BQ96G75 393 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms