RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 CHRAC1Q9NRG0 131 aa25.02■■□□□ 1.6
TSPAN4-207ENST00000397411 RIMKLBQ9ULI2 386 aa25.02■■□□□ 1.6
TSPAN4-207ENST00000397411 DNAJC16Q9Y2G8 782 aa25.02■■□□□ 1.6
TSPAN4-207ENST00000397411 ST14Q9Y5Y6 855 aa25.02■■□□□ 1.6
TSPAN4-207ENST00000397411 PLXNB3Q9ULL4 1909 aa25.02■■□□□ 1.6
TSPAN4-207ENST00000397411 CACNA1AO00555 2505 aa25.01■■□□□ 1.59
TSPAN4-207ENST00000397411 OR2AG2A6NM03 316 aa25.01■■□□□ 1.59
TSPAN4-207ENST00000397411 RHPN2P1A8MT19 583 aa25.01■■□□□ 1.59
TSPAN4-207ENST00000397411 GOLGA8MH3BSY2 632 aa25.01■■□□□ 1.59
TSPAN4-207ENST00000397411 NOBOXO60393 691 aa25.01■■□□□ 1.59
TSPAN4-207ENST00000397411 SLC2A4P14672 509 aa25.01■■□□□ 1.59
TSPAN4-207ENST00000397411 MAGEA6P43360 314 aa25.01■■□□□ 1.59
TSPAN4-207ENST00000397411 CRADDP78560 199 aa25.01■■□□□ 1.59
TSPAN4-207ENST00000397411 ANKRD22Q5VYY1 191 aa25.01■■□□□ 1.59
TSPAN4-207ENST00000397411 CASC4Q6P4E1 433 aa25.01■■□□□ 1.59
TSPAN4-207ENST00000397411 SYDE1Q6ZW31 735 aaPredicted RBP25.01■■□□□ 1.59
TSPAN4-207ENST00000397411 PCGF5Q86SE9 256 aa25.01■■□□□ 1.59
TSPAN4-207ENST00000397411 PPIL6Q8IXY8 311 aa25.01■■□□□ 1.59
TSPAN4-207ENST00000397411 TIMM29Q9BSF4 260 aa25.01■■□□□ 1.59
TSPAN4-207ENST00000397411 SYNDIG1Q9H7V2 258 aa25.01■■□□□ 1.59
TSPAN4-207ENST00000397411 ZDHHC3Q9NYG2 299 aa25.01■■□□□ 1.59
TSPAN4-207ENST00000397411 LRIT1Q9P2V4 623 aa25.01■■□□□ 1.59
TSPAN4-207ENST00000397411 SLC2A6Q9UGQ3 507 aa25.01■■□□□ 1.59
TSPAN4-207ENST00000397411 CCDC162PA2VCL2 907 aa25■■□□□ 1.59
TSPAN4-207ENST00000397411 OPA1O60313 960 aa25■■□□□ 1.59
TSPAN4-207ENST00000397411 POP7O75817 140 aaKnown RBP25■■□□□ 1.59
TSPAN4-207ENST00000397411 GLB1P16278 677 aa25■■□□□ 1.59
TSPAN4-207ENST00000397411 ARSDP51689 593 aa25■■□□□ 1.59
TSPAN4-207ENST00000397411 MAZP56270 477 aaKnown RBP25■■□□□ 1.59
TSPAN4-207ENST00000397411 PTK6Q13882 451 aa25■■□□□ 1.59
TSPAN4-207ENST00000397411 PERM1Q5SV97 790 aa25■■□□□ 1.59
TSPAN4-207ENST00000397411 FNBP1LQ5T0N5 605 aa25■■□□□ 1.59
TSPAN4-207ENST00000397411 SERPINA9Q86WD7 417 aa25■■□□□ 1.59
TSPAN4-207ENST00000397411 TMPRSS12Q86WS5 348 aa25■■□□□ 1.59
TSPAN4-207ENST00000397411 SFTPA2Q8IWL1 248 aa25■■□□□ 1.59
TSPAN4-207ENST00000397411 MCUQ8NE86 351 aa25■■□□□ 1.59
TSPAN4-207ENST00000397411 ZNF592Q92610 1267 aa25■■□□□ 1.59
TSPAN4-207ENST00000397411 SLCO2A1Q92959 643 aa25■■□□□ 1.59
TSPAN4-207ENST00000397411 CCDC74AQ96AQ1 378 aa25■■□□□ 1.59
TSPAN4-207ENST00000397411 SGF29Q96ES7 293 aa25■■□□□ 1.59
TSPAN4-207ENST00000397411 CCDC3Q9BQI4 270 aa25■■□□□ 1.59
TSPAN4-207ENST00000397411 XAB2Q9HCS7 855 aaKnown RBP25■■□□□ 1.59
TSPAN4-207ENST00000397411 SAMD15Q9P1V8 674 aa25■■□□□ 1.59
TSPAN4-207ENST00000397411 SLC23A2Q9UGH3 650 aa25■■□□□ 1.59
TSPAN4-207ENST00000397411 ANAPC5Q9UJX4 755 aa25■■□□□ 1.59
TSPAN4-207ENST00000397411 ZW10O43264 779 aa24.99■■□□□ 1.59
TSPAN4-207ENST00000397411 KCNJ13O60928 360 aa24.99■■□□□ 1.59
TSPAN4-207ENST00000397411 PBLDP30039 288 aaPredicted RBP24.99■■□□□ 1.59
TSPAN4-207ENST00000397411 PTGIRP43119 386 aa24.99■■□□□ 1.59
TSPAN4-207ENST00000397411 CDKN1CP49918 316 aaPredicted RBP24.99■■□□□ 1.59
TSPAN4-207ENST00000397411 SMAD1Q15797 465 aaKnown RBP24.99■■□□□ 1.59
TSPAN4-207ENST00000397411 HES3Q5TGS1 186 aa24.99■■□□□ 1.59
TSPAN4-207ENST00000397411 AFTPHQ6ULP2 937 aa24.99■■□□□ 1.59
TSPAN4-207ENST00000397411 TMPRSS7Q7RTY8 843 aa24.99■■□□□ 1.59
TSPAN4-207ENST00000397411 AMZ2Q86W34 360 aa24.99■■□□□ 1.59
TSPAN4-207ENST00000397411 ARL14Q8N4G2 192 aa24.99■■□□□ 1.59
TSPAN4-207ENST00000397411 Q8N9G6 341 aaPredicted RBP24.99■■□□□ 1.59
TSPAN4-207ENST00000397411 PEX13Q92968 403 aa24.99■■□□□ 1.59
TSPAN4-207ENST00000397411 KRT12Q99456 494 aa24.99■■□□□ 1.59
TSPAN4-207ENST00000397411 SYBUQ9NX95 663 aa24.99■■□□□ 1.59
TSPAN4-207ENST00000397411 TBC1D29Q9UFV1 150 aa24.99■■□□□ 1.59
TSPAN4-207ENST00000397411 KLK13Q9UKR3 277 aa24.99■■□□□ 1.59
TSPAN4-207ENST00000397411 DNMT3AQ9Y6K1 912 aaPredicted RBP24.99■■□□□ 1.59
TSPAN4-207ENST00000397411 ASXL3Q9C0F0 2248 aa24.98■■□□□ 1.59
TSPAN4-207ENST00000397411 OR51F1A6NGY5 319 aa24.98■■□□□ 1.59
TSPAN4-207ENST00000397411 AGAP14A8MT82 685 aa24.98■■□□□ 1.59
TSPAN4-207ENST00000397411 PDZK1P1A8MUH7 402 aa24.98■■□□□ 1.59
TSPAN4-207ENST00000397411 AVILO75366 819 aa24.98■■□□□ 1.59
TSPAN4-207ENST00000397411 GOT2P00505 430 aaKnown RBP24.98■■□□□ 1.59
TSPAN4-207ENST00000397411 IDSP22304 550 aa24.98■■□□□ 1.59
TSPAN4-207ENST00000397411 PSMA3P25788 255 aa24.98■■□□□ 1.59
TSPAN4-207ENST00000397411 PPARGP37231 505 aaPredicted RBP24.98■■□□□ 1.59
TSPAN4-207ENST00000397411 CLCNKAP51800 687 aa24.98■■□□□ 1.59
TSPAN4-207ENST00000397411 CTSCP53634 463 aa24.98■■□□□ 1.59
TSPAN4-207ENST00000397411 INSM1Q01101 510 aaPredicted RBP24.98■■□□□ 1.59
TSPAN4-207ENST00000397411 HLTFQ14527 1009 aaKnown RBP eCLIP24.98■■□□□ 1.59
TSPAN4-207ENST00000397411 FASTKD1Q53R41 847 aaKnown RBP24.98■■□□□ 1.59
TSPAN4-207ENST00000397411 LYPLAL1Q5VWZ2 237 aa24.98■■□□□ 1.59
TSPAN4-207ENST00000397411 ZNF547Q8IVP9 402 aa24.98■■□□□ 1.59
TSPAN4-207ENST00000397411 NAGSQ8N159 534 aa24.98■■□□□ 1.59
TSPAN4-207ENST00000397411 OR13J1Q8NGT2 312 aa24.98■■□□□ 1.59
TSPAN4-207ENST00000397411 OR4L1Q8NH43 312 aa24.98■■□□□ 1.59
TSPAN4-207ENST00000397411 PATE1Q8WXA2 126 aa24.98■■□□□ 1.59
TSPAN4-207ENST00000397411 ZNF778Q96MU6 729 aa24.98■■□□□ 1.59
TSPAN4-207ENST00000397411 STN1Q9H668 368 aaKnown RBP24.98■■□□□ 1.59
TSPAN4-207ENST00000397411 PRDM8Q9NQV8 689 aa24.98■■□□□ 1.59
TSPAN4-207ENST00000397411 NEUROG3Q9Y4Z2 214 aa24.98■■□□□ 1.59
TSPAN4-207ENST00000397411 RNF215Q9Y6U7 377 aa24.98■■□□□ 1.59
TSPAN4-207ENST00000397411 PTPRBP23467 1997 aa24.98■■□□□ 1.59
TSPAN4-207ENST00000397411 RP1P56715 2156 aa24.97■■□□□ 1.59
TSPAN4-207ENST00000397411 FAM149AA5PLN7 773 aa24.97■■□□□ 1.59
TSPAN4-207ENST00000397411 SDR42E2A6NKP2 422 aa24.97■■□□□ 1.59
TSPAN4-207ENST00000397411 OR5K4A6NMS3 321 aa24.97■■□□□ 1.59
TSPAN4-207ENST00000397411 TMEM63AO94886 807 aa24.97■■□□□ 1.59
TSPAN4-207ENST00000397411 MT-CO3P00414 261 aa24.97■■□□□ 1.59
TSPAN4-207ENST00000397411 PRSS56P0CW18 603 aa24.97■■□□□ 1.59
TSPAN4-207ENST00000397411 MLNP12872 115 aa24.97■■□□□ 1.59
TSPAN4-207ENST00000397411 ATP1B2P14415 290 aaPredicted RBP24.97■■□□□ 1.59
TSPAN4-207ENST00000397411 ACRV1P26436 265 aa24.97■■□□□ 1.59
TSPAN4-207ENST00000397411 PPM1FP49593 454 aaPredicted RBP24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms