RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 CHERPQ8IWX8 916 aaKnown RBP7.14□□□□□ -1.27
UPF2-203ENST00000397053 ZBTB2Q8N680 514 aa7.14□□□□□ -1.27
UPF2-203ENST00000397053 OR2T12Q8NG77 320 aa7.14□□□□□ -1.27
UPF2-203ENST00000397053 GPR151Q8TDV0 419 aa7.14□□□□□ -1.27
UPF2-203ENST00000397053 HNRNPLLQ8WVV9 542 aaKnown RBP7.14□□□□□ -1.27
UPF2-203ENST00000397053 TP53INP1Q96A56 240 aa7.14□□□□□ -1.27
UPF2-203ENST00000397053 RPL10LQ96L21 214 aaKnown RBP7.14□□□□□ -1.27
UPF2-203ENST00000397053 NDC1Q9BTX1 674 aa7.14□□□□□ -1.27
UPF2-203ENST00000397053 PCBD2Q9H0N5 130 aa7.14□□□□□ -1.27
UPF2-203ENST00000397053 LRTM1Q9HBL6 345 aa7.14□□□□□ -1.27
UPF2-203ENST00000397053 INSL6Q9Y581 213 aa7.14□□□□□ -1.27
UPF2-203ENST00000397053 SPATA31C2B4DYI2 1134 aa7.14□□□□□ -1.27
UPF2-203ENST00000397053 SLC22A3O75751 556 aa7.14□□□□□ -1.27
UPF2-203ENST00000397053 ERBB2P04626 1255 aa7.14□□□□□ -1.27
UPF2-203ENST00000397053 IL7RP16871 459 aa7.14□□□□□ -1.27
UPF2-203ENST00000397053 RHOQP17081 205 aa7.14□□□□□ -1.27
UPF2-203ENST00000397053 SLC6A9P48067 706 aa7.14□□□□□ -1.27
UPF2-203ENST00000397053 CEBPGP53567 150 aa7.14□□□□□ -1.27
UPF2-203ENST00000397053 AIF1P55008 147 aa7.14□□□□□ -1.27
UPF2-203ENST00000397053 GNA12Q03113 381 aa7.14□□□□□ -1.27
UPF2-203ENST00000397053 C9orf57Q5W0N0 161 aa7.14□□□□□ -1.27
UPF2-203ENST00000397053 CWF19L1Q69YN2 538 aaKnown RBP7.14□□□□□ -1.27
UPF2-203ENST00000397053 ALG1LQ6GMV1 187 aa7.14□□□□□ -1.27
UPF2-203ENST00000397053 ADGRA1Q86SQ6 560 aa7.14□□□□□ -1.27
UPF2-203ENST00000397053 DHDDSQ86SQ9 333 aa7.14□□□□□ -1.27
UPF2-203ENST00000397053 AVL9Q8NBF6 648 aa7.14□□□□□ -1.27
UPF2-203ENST00000397053 TMEM161BQ8NDZ6 487 aa7.14□□□□□ -1.27
UPF2-203ENST00000397053 PIK3C3Q8NEB9 887 aa7.14□□□□□ -1.27
UPF2-203ENST00000397053 OR5B17Q8NGF7 314 aa7.14□□□□□ -1.27
UPF2-203ENST00000397053 PNPT1Q8TCS8 783 aaKnown RBP7.14□□□□□ -1.27
UPF2-203ENST00000397053 WFIKKN2Q8TEU8 576 aa7.14□□□□□ -1.27
UPF2-203ENST00000397053 KLHL32Q96NJ5 620 aa7.14□□□□□ -1.27
UPF2-203ENST00000397053 TRMOQ9BU70 441 aa7.14□□□□□ -1.27
UPF2-203ENST00000397053 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.14□□□□□ -1.27
UPF2-203ENST00000397053 MMADHCQ9H3L0 296 aaPredicted RBP7.14□□□□□ -1.27
UPF2-203ENST00000397053 TPK1Q9H3S4 243 aa7.14□□□□□ -1.27
UPF2-203ENST00000397053 IL17RBQ9NRM6 502 aa7.14□□□□□ -1.27
UPF2-203ENST00000397053 ING4Q9UNL4 249 aa7.14□□□□□ -1.27
UPF2-203ENST00000397053 RAP2CQ9Y3L5 183 aa7.14□□□□□ -1.27
UPF2-203ENST00000397053 UBIAD1Q9Y5Z9 338 aa7.14□□□□□ -1.27
UPF2-203ENST00000397053 A8MUA0 341 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 SYN3O14994 580 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 DHX15O43143 795 aaKnown RBP7.13□□□□□ -1.27
UPF2-203ENST00000397053 RPP40O75818 363 aaKnown RBP7.13□□□□□ -1.27
UPF2-203ENST00000397053 ASLP04424 464 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 OR3A3P47888 321 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 OR3A2P47893 321 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 EIF2B2P49770 351 aaKnown RBP7.13□□□□□ -1.27
UPF2-203ENST00000397053 TOB1P50616 345 aaPredicted RBP7.13□□□□□ -1.27
UPF2-203ENST00000397053 SLC5A3P53794 718 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 BNIP2Q12982 314 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 CHAF1BQ13112 559 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 SP140Q13342 867 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 DENND5AQ6IQ26 1287 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 AMZ2Q86W34 360 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 ZNF567Q8N184 647 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 ABHD5Q8WTS1 349 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 KLHL6Q8WZ60 621 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 KLRG1Q96E93 195 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 EBNA1BP2Q99848 306 aaKnown RBP7.13□□□□□ -1.27
UPF2-203ENST00000397053 GAL3ST1Q99999 423 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 BTBD1Q9H0C5 482 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 C11orf49Q9H6J7 331 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 CCNB1IP1Q9NPC3 277 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 SDHAF3Q9NRP4 125 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 GGA2Q9UJY4 613 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 POU2F3Q9UKI9 436 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 RIMKLBQ9ULI2 386 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 TBC1D24Q9ULP9 559 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.13□□□□□ -1.27
UPF2-203ENST00000397053 FAM234BA2RU67 622 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 A8MU76 341 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 SLC33A1O00400 549 aaPredicted RBP7.13□□□□□ -1.27
UPF2-203ENST00000397053 PI15O43692 258 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 IFNW1P05000 195 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 ITGA2BP08514 1039 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 FSHRP23945 695 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 DDX6P26196 483 aaKnown RBP eCLIP7.13□□□□□ -1.27
UPF2-203ENST00000397053 NDUFS1P28331 727 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 HCAR3P49019 387 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 ST3GAL1Q11201 340 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 HSPB3Q12988 150 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 SLC25A52Q3SY17 297 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 KCTD21Q4G0X4 260 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 WASHC2DQ5SRD0 308 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 SPRYD7Q5W111 196 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 SLC9A4Q6AI14 798 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 QSOX2Q6ZRP7 698 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 BBS12Q6ZW61 710 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 C1orf186Q6ZWK4 172 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 ACMSDQ8TDX5 336 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 PDLIM2Q96JY6 352 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 TRAPPC9Q96Q05 1148 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 PNO1Q9NRX1 252 aaKnown RBP7.13□□□□□ -1.27
UPF2-203ENST00000397053 FAM198AQ9UFP1 575 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 DHRS7Q9Y394 339 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 MAP4K5Q9Y4K4 846 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 PCDHGC4Q9Y5F7 938 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 BIVM-ERCC5R4GMW8 1640 aa7.13□□□□□ -1.27
UPF2-203ENST00000397053 BICRAQ9NZM4 1560 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms