RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 PRSS56P0CW18 603 aa16.22■□□□□ 0.19
AP1S3-202ENST00000396653 NSG1P42857 185 aa16.22■□□□□ 0.19
AP1S3-202ENST00000396653 POLD2P49005 469 aa16.22■□□□□ 0.19
AP1S3-202ENST00000396653 THOC5Q13769 683 aaKnown RBP16.22■□□□□ 0.19
AP1S3-202ENST00000396653 LRP8Q14114 963 aa16.22■□□□□ 0.19
AP1S3-202ENST00000396653 BCL7AQ4VC05 210 aa16.22■□□□□ 0.19
AP1S3-202ENST00000396653 RNF187Q5TA31 235 aaPredicted RBP16.22■□□□□ 0.19
AP1S3-202ENST00000396653 KCTD16Q68DU8 428 aa16.22■□□□□ 0.19
AP1S3-202ENST00000396653 NEPROQ6NW34 567 aa16.22■□□□□ 0.19
AP1S3-202ENST00000396653 ZNF449Q6P9G9 518 aa16.22■□□□□ 0.19
AP1S3-202ENST00000396653 KANSL1Q7Z3B3 1105 aa16.22■□□□□ 0.19
AP1S3-202ENST00000396653 SDCCAG8Q86SQ7 713 aaPredicted RBP16.22■□□□□ 0.19
AP1S3-202ENST00000396653 LRRTM4Q86VH4 590 aa16.22■□□□□ 0.19
AP1S3-202ENST00000396653 KCNMB4Q86W47 210 aa16.22■□□□□ 0.19
AP1S3-202ENST00000396653 CCDC25Q86WR0 208 aa16.22■□□□□ 0.19
AP1S3-202ENST00000396653 ANKMY2Q8IV38 441 aa16.22■□□□□ 0.19
AP1S3-202ENST00000396653 RBFAQ8N0V3 343 aa16.22■□□□□ 0.19
AP1S3-202ENST00000396653 SAP25Q8TEE9 199 aa16.22■□□□□ 0.19
AP1S3-202ENST00000396653 CERS2Q96G23 380 aa16.22■□□□□ 0.19
AP1S3-202ENST00000396653 CFAP36Q96G28 342 aa16.22■□□□□ 0.19
AP1S3-202ENST00000396653 TCF12Q99081 682 aa16.22■□□□□ 0.19
AP1S3-202ENST00000396653 FAM167BQ9BTA0 163 aa16.22■□□□□ 0.19
AP1S3-202ENST00000396653 LRRC61Q9BV99 259 aa16.22■□□□□ 0.19
AP1S3-202ENST00000396653 IL21RQ9HBE5 538 aa16.22■□□□□ 0.19
AP1S3-202ENST00000396653 ARFGAP3Q9NP61 516 aa16.22■□□□□ 0.19
AP1S3-202ENST00000396653 RXFP3Q9NSD7 469 aa16.22■□□□□ 0.19
AP1S3-202ENST00000396653 C20orf96Q9NUD7 363 aaPredicted RBP16.22■□□□□ 0.19
AP1S3-202ENST00000396653 MARCH4Q9P2E8 410 aaPredicted RBP16.22■□□□□ 0.19
AP1S3-202ENST00000396653 MOSPD1Q9UJG1 213 aa16.22■□□□□ 0.19
AP1S3-202ENST00000396653 GPR34Q9UPC5 381 aa16.22■□□□□ 0.19
AP1S3-202ENST00000396653 COL5A1P20908 1838 aaPredicted RBP16.22■□□□□ 0.19
AP1S3-202ENST00000396653 F8W8V4 182 aa16.21■□□□□ 0.19
AP1S3-202ENST00000396653 GRID2O43424 1007 aa16.21■□□□□ 0.19
AP1S3-202ENST00000396653 SPAG6O75602 509 aa16.21■□□□□ 0.19
AP1S3-202ENST00000396653 AP2A2O94973 939 aa16.21■□□□□ 0.19
AP1S3-202ENST00000396653 CTSEP14091 401 aa16.21■□□□□ 0.19
AP1S3-202ENST00000396653 ZNF7P17097 686 aaPredicted RBP16.21■□□□□ 0.19
AP1S3-202ENST00000396653 MAGEA4P43358 317 aa16.21■□□□□ 0.19
AP1S3-202ENST00000396653 GNPDA1P46926 289 aa16.21■□□□□ 0.19
AP1S3-202ENST00000396653 B4GALNT1Q00973 533 aa16.21■□□□□ 0.19
AP1S3-202ENST00000396653 SEMA3AQ14563 771 aa16.21■□□□□ 0.19
AP1S3-202ENST00000396653 SUZ12Q15022 739 aaKnown RBP16.21■□□□□ 0.19
AP1S3-202ENST00000396653 ELOCQ15369 112 aa16.21■□□□□ 0.19
AP1S3-202ENST00000396653 ZNF542PQ5EBM4 170 aa16.21■□□□□ 0.19
AP1S3-202ENST00000396653 HP1BP3Q5SSJ5 553 aaPredicted RBP16.21■□□□□ 0.19
AP1S3-202ENST00000396653 PRAMEF14Q5SWL7 426 aa16.21■□□□□ 0.19
AP1S3-202ENST00000396653 ZNF648Q5T619 568 aaPredicted RBP16.21■□□□□ 0.19
AP1S3-202ENST00000396653 MICALCLQ6ZW33 695 aa16.21■□□□□ 0.19
AP1S3-202ENST00000396653 RD3Q7Z3Z2 195 aa16.21■□□□□ 0.19
AP1S3-202ENST00000396653 CNTN4Q8IWV2 1026 aa16.21■□□□□ 0.19
AP1S3-202ENST00000396653 OTUD6BQ8N6M0 293 aa16.21■□□□□ 0.19
AP1S3-202ENST00000396653 RASGEF1AQ8N9B8 481 aa16.21■□□□□ 0.19
AP1S3-202ENST00000396653 ZNF548Q8NEK5 533 aaPredicted RBP16.21■□□□□ 0.19
AP1S3-202ENST00000396653 OR2I1PQ8NGU4 316 aa16.21■□□□□ 0.19
AP1S3-202ENST00000396653 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.21■□□□□ 0.19
AP1S3-202ENST00000396653 TIMM29Q9BSF4 260 aa16.21■□□□□ 0.19
AP1S3-202ENST00000396653 TCEAL2Q9H3H9 227 aaPredicted RBP16.21■□□□□ 0.19
AP1S3-202ENST00000396653 ANKZF1Q9H8Y5 726 aa16.21■□□□□ 0.19
AP1S3-202ENST00000396653 VPS9D1Q9Y2B5 631 aa16.21■□□□□ 0.19
AP1S3-202ENST00000396653 DNMT3AQ9Y6K1 912 aaPredicted RBP16.21■□□□□ 0.19
AP1S3-202ENST00000396653 ASCC3Q8N3C0 2202 aaKnown RBP16.21■□□□□ 0.18
AP1S3-202ENST00000396653 KLHL33A6NCF5 533 aa16.2■□□□□ 0.18
AP1S3-202ENST00000396653 NEMP2A6NFY4 417 aa16.2■□□□□ 0.18
AP1S3-202ENST00000396653 KMOO15229 486 aa16.2■□□□□ 0.18
AP1S3-202ENST00000396653 AQP9O43315 295 aa16.2■□□□□ 0.18
AP1S3-202ENST00000396653 KCNJ13O60928 360 aa16.2■□□□□ 0.18
AP1S3-202ENST00000396653 GSTM1P09488 218 aa16.2■□□□□ 0.18
AP1S3-202ENST00000396653 ATP1B2P14415 290 aaPredicted RBP16.2■□□□□ 0.18
AP1S3-202ENST00000396653 RPS3P23396 243 aaKnown RBP eCLIP16.2■□□□□ 0.18
AP1S3-202ENST00000396653 DGKAP23743 735 aa16.2■□□□□ 0.18
AP1S3-202ENST00000396653 PRLHRP49683 370 aa16.2■□□□□ 0.18
AP1S3-202ENST00000396653 CLCNKAP51800 687 aa16.2■□□□□ 0.18
AP1S3-202ENST00000396653 ARHGAP8P85298 464 aa16.2■□□□□ 0.18
AP1S3-202ENST00000396653 GSTM4Q03013 218 aa16.2■□□□□ 0.18
AP1S3-202ENST00000396653 INAVAQ3KP66 663 aa16.2■□□□□ 0.18
AP1S3-202ENST00000396653 DBX2Q6ZNG2 339 aa16.2■□□□□ 0.18
AP1S3-202ENST00000396653 CYS1Q717R9 158 aa16.2■□□□□ 0.18
AP1S3-202ENST00000396653 MARK2Q7KZI7 788 aaKnown RBP16.2■□□□□ 0.18
AP1S3-202ENST00000396653 LRRC6Q86X45 466 aa16.2■□□□□ 0.18
AP1S3-202ENST00000396653 CILP2Q8IUL8 1156 aa16.2■□□□□ 0.18
AP1S3-202ENST00000396653 PALM2Q8IXS6 379 aa16.2■□□□□ 0.18
AP1S3-202ENST00000396653 NETO1Q8TDF5 533 aa16.2■□□□□ 0.18
AP1S3-202ENST00000396653 GPBAR1Q8TDU6 330 aa16.2■□□□□ 0.18
AP1S3-202ENST00000396653 UBXN4Q92575 508 aa16.2■□□□□ 0.18
AP1S3-202ENST00000396653 LINC00615Q96LM1 132 aaPredicted RBP16.2■□□□□ 0.18
AP1S3-202ENST00000396653 BOCQ9BWV1 1114 aa16.2■□□□□ 0.18
AP1S3-202ENST00000396653 GSDMCQ9BYG8 508 aa16.2■□□□□ 0.18
AP1S3-202ENST00000396653 INTS10Q9NVR2 710 aaKnown RBP16.2■□□□□ 0.18
AP1S3-202ENST00000396653 NFU1Q9UMS0 254 aa16.2■□□□□ 0.18
AP1S3-202ENST00000396653 ZFHX2Q9C0A1 2572 aaPredicted RBP16.19■□□□□ 0.18
AP1S3-202ENST00000396653 ARHGEF17Q96PE2 2063 aaPredicted RBP16.19■□□□□ 0.18
AP1S3-202ENST00000396653 GOLGA8KD6RF30 607 aa16.19■□□□□ 0.18
AP1S3-202ENST00000396653 LMO7DNF2Z398 122 aa16.19■□□□□ 0.18
AP1S3-202ENST00000396653 GOLGA8TH3BQL2 631 aa16.19■□□□□ 0.18
AP1S3-202ENST00000396653 PRMT5O14744 637 aaPredicted RBP16.19■□□□□ 0.18
AP1S3-202ENST00000396653 TPP1O14773 563 aa16.19■□□□□ 0.18
AP1S3-202ENST00000396653 FLRT2O43155 660 aa16.19■□□□□ 0.18
AP1S3-202ENST00000396653 SGTAO43765 313 aa16.19■□□□□ 0.18
AP1S3-202ENST00000396653 SDC3O75056 442 aa16.19■□□□□ 0.18
AP1S3-202ENST00000396653 NDUFS3O75489 264 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms