RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 MINDY1Q8N5J2 469 aa16.61■□□□□ 0.25
NUP50-202ENST00000396096 FIBINQ8TAL6 211 aa16.61■□□□□ 0.25
NUP50-202ENST00000396096 MRPS31Q92665 395 aaKnown RBP16.61■□□□□ 0.25
NUP50-202ENST00000396096 PLEKHG4BQ96PX9 1271 aa16.61■□□□□ 0.25
NUP50-202ENST00000396096 PKP2Q99959 881 aa16.61■□□□□ 0.25
NUP50-202ENST00000396096 TM6SF2Q9BZW4 377 aa16.61■□□□□ 0.25
NUP50-202ENST00000396096 CRISPLD2Q9H0B8 497 aa16.61■□□□□ 0.25
NUP50-202ENST00000396096 COPS7BQ9H9Q2 264 aaPredicted RBP16.61■□□□□ 0.25
NUP50-202ENST00000396096 ZFYVE1Q9HBF4 777 aa16.61■□□□□ 0.25
NUP50-202ENST00000396096 AIG1Q9NVV5 245 aa16.61■□□□□ 0.25
NUP50-202ENST00000396096 CD274Q9NZQ7 290 aa16.61■□□□□ 0.25
NUP50-202ENST00000396096 CNOT11Q9UKZ1 510 aaKnown RBP16.61■□□□□ 0.25
NUP50-202ENST00000396096 ST14Q9Y5Y6 855 aa16.61■□□□□ 0.25
NUP50-202ENST00000396096 CAPN8A6NHC0 703 aa16.61■□□□□ 0.25
NUP50-202ENST00000396096 NCF1BA6NI72 391 aaPredicted RBP16.61■□□□□ 0.25
NUP50-202ENST00000396096 NCF1CA8MVU1 366 aaPredicted RBP16.61■□□□□ 0.25
NUP50-202ENST00000396096 KIF1CO43896 1103 aaKnown RBP16.61■□□□□ 0.25
NUP50-202ENST00000396096 NCF1P14598 390 aaPredicted RBP16.61■□□□□ 0.25
NUP50-202ENST00000396096 CAPN3P20807 821 aa16.61■□□□□ 0.25
NUP50-202ENST00000396096 PRDX3P30048 256 aaKnown RBP16.61■□□□□ 0.25
NUP50-202ENST00000396096 FOXM1Q08050 763 aa16.61■□□□□ 0.25
NUP50-202ENST00000396096 LYPLAL1Q5VWZ2 237 aa16.61■□□□□ 0.25
NUP50-202ENST00000396096 GPRIN3Q6ZVF9 776 aa16.61■□□□□ 0.25
NUP50-202ENST00000396096 TMCO2Q7Z6W1 182 aaPredicted RBP16.61■□□□□ 0.25
NUP50-202ENST00000396096 SERPINA9Q86WD7 417 aa16.61■□□□□ 0.25
NUP50-202ENST00000396096 RBFAQ8N0V3 343 aa16.61■□□□□ 0.25
NUP50-202ENST00000396096 CBARPQ8N350 705 aaPredicted RBP16.61■□□□□ 0.25
NUP50-202ENST00000396096 PIP4K2CQ8TBX8 421 aa16.61■□□□□ 0.25
NUP50-202ENST00000396096 DDI1Q8WTU0 396 aa16.61■□□□□ 0.25
NUP50-202ENST00000396096 TUBGCP5Q96RT8 1024 aa16.61■□□□□ 0.25
NUP50-202ENST00000396096 PCDHAC1Q9H158 963 aa16.61■□□□□ 0.25
NUP50-202ENST00000396096 ABCB8Q9NUT2 735 aa16.61■□□□□ 0.25
NUP50-202ENST00000396096 TMEM39AQ9NV64 488 aa16.61■□□□□ 0.25
NUP50-202ENST00000396096 KIAA1522Q9P206 1035 aaPredicted RBP16.61■□□□□ 0.25
NUP50-202ENST00000396096 EVLQ9UI08 416 aaPredicted RBP16.61■□□□□ 0.25
NUP50-202ENST00000396096 APPL1Q9UKG1 709 aa16.61■□□□□ 0.25
NUP50-202ENST00000396096 FNDC3AQ9Y2H6 1198 aaKnown RBP16.61■□□□□ 0.25
NUP50-202ENST00000396096 PRAMEF1O95521 474 aa16.6■□□□□ 0.25
NUP50-202ENST00000396096 CYBBP04839 570 aa16.6■□□□□ 0.25
NUP50-202ENST00000396096 SLC7A2P52569 658 aa16.6■□□□□ 0.25
NUP50-202ENST00000396096 CYP4F8P98187 520 aa16.6■□□□□ 0.25
NUP50-202ENST00000396096 ECT2LQ008S8 904 aa16.6■□□□□ 0.25
NUP50-202ENST00000396096 LMAN2Q12907 356 aa16.6■□□□□ 0.25
NUP50-202ENST00000396096 RALGDSQ12967 914 aa16.6■□□□□ 0.25
NUP50-202ENST00000396096 GRM2Q14416 872 aa16.6■□□□□ 0.25
NUP50-202ENST00000396096 RBBP7Q16576 425 aa16.6■□□□□ 0.25
NUP50-202ENST00000396096 FAM117BQ6P1L5 589 aa16.6■□□□□ 0.25
NUP50-202ENST00000396096 CHCHD4Q8N4Q1 142 aa16.6■□□□□ 0.25
NUP50-202ENST00000396096 UHRF1Q96T88 793 aaPredicted RBP16.6■□□□□ 0.25
NUP50-202ENST00000396096 BRINP2Q9C0B6 783 aa16.6■□□□□ 0.25
NUP50-202ENST00000396096 CLPBQ9H078 707 aa16.6■□□□□ 0.25
NUP50-202ENST00000396096 ZBP1Q9H171 429 aa16.6■□□□□ 0.25
NUP50-202ENST00000396096 CFAP97Q9P2B7 532 aa16.6■□□□□ 0.25
NUP50-202ENST00000396096 EIF2B4Q9UI10 523 aaKnown RBP16.6■□□□□ 0.25
NUP50-202ENST00000396096 GNPTGQ9UJJ9 305 aa16.6■□□□□ 0.25
NUP50-202ENST00000396096 RAB26Q9ULW5 256 aa16.6■□□□□ 0.25
NUP50-202ENST00000396096 SH3BP1Q9Y3L3 701 aa16.6■□□□□ 0.25
NUP50-202ENST00000396096 TIMM22Q9Y584 194 aa16.6■□□□□ 0.25
NUP50-202ENST00000396096 TNPO3Q9Y5L0 923 aaKnown RBP16.6■□□□□ 0.25
NUP50-202ENST00000396096 HELZP42694 1942 aaKnown RBP16.6■□□□□ 0.25
NUP50-202ENST00000396096 IQCF5A8MTL0 148 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 FXYD1O00168 92 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 ANGPT2O15123 496 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 GPR39O43194 453 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 AP1G1O43747 822 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 EFCAB14O75071 495 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 ZNF821O75541 412 aaPredicted RBP16.59■□□□□ 0.25
NUP50-202ENST00000396096 RNASEH2AO75792 299 aaKnown RBP16.59■□□□□ 0.25
NUP50-202ENST00000396096 IGSF6O95976 241 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 PFKLP17858 780 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 ITGALP20701 1170 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 PTPN5P54829 565 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 WDR5P61964 334 aaKnown RBP16.59■□□□□ 0.25
NUP50-202ENST00000396096 FOLH1Q04609 750 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 NFATC2Q13469 925 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 PLEKHG6Q3KR16 790 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 FBXO48Q5FWF7 155 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 IL23RQ5VWK5 629 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 SBSNQ6UWP8 590 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 LAYNQ6UX15 382 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 FAM151BQ6UXP7 276 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 BBS7Q8IWZ6 715 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 MARVELD2Q8N4S9 558 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 ZUFSPQ96AP4 578 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 LMLNQ96KR4 655 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 LYSMD1Q96S90 227 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 ATP13A3Q9H7F0 1226 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 SARS2Q9NP81 518 aaKnown RBP16.59■□□□□ 0.25
NUP50-202ENST00000396096 GID8Q9NWU2 228 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 ASB1Q9Y576 335 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 AP4S1Q9Y587 144 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 C1orf232A0A0U1RR37 186 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 GIPC1O14908 333 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 TGM5O43548 720 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 CKMP06732 381 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 CLTBP09497 229 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 HSPA8P11142 646 aaKnown RBP16.59■□□□□ 0.25
NUP50-202ENST00000396096 HSD17B1P14061 328 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 SLC7A1P30825 629 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 HNF1BP35680 557 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms