RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 ZNF106Q9H2Y7 1883 aaKnown RBP16.33■□□□□ 0.21
CXCL1-201ENST00000395761 TRBV5-4A0A0C4DH59 114 aa16.33■□□□□ 0.2
CXCL1-201ENST00000395761 B4DGG1 531 aa16.33■□□□□ 0.2
CXCL1-201ENST00000395761 GPR89AB7ZAQ6 455 aa16.33■□□□□ 0.2
CXCL1-201ENST00000395761 AP3B1O00203 1094 aa16.33■□□□□ 0.2
CXCL1-201ENST00000395761 DNALI1O14645 258 aaPredicted RBP16.33■□□□□ 0.2
CXCL1-201ENST00000395761 NOBOXO60393 691 aa16.33■□□□□ 0.2
CXCL1-201ENST00000395761 TOP3BO95985 862 aaKnown RBP16.33■□□□□ 0.2
CXCL1-201ENST00000395761 GPR89BP0CG08 455 aa16.33■□□□□ 0.2
CXCL1-201ENST00000395761 MSH3P20585 1137 aa16.33■□□□□ 0.2
CXCL1-201ENST00000395761 ACP1P24666 158 aa16.33■□□□□ 0.2
CXCL1-201ENST00000395761 NMBRP28336 390 aa16.33■□□□□ 0.2
CXCL1-201ENST00000395761 DRG2P55039 364 aaKnown RBP16.33■□□□□ 0.2
CXCL1-201ENST00000395761 B4GALNT1Q00973 533 aa16.33■□□□□ 0.2
CXCL1-201ENST00000395761 ACVR1Q04771 509 aa16.33■□□□□ 0.2
CXCL1-201ENST00000395761 CACNG1Q06432 222 aa16.33■□□□□ 0.2
CXCL1-201ENST00000395761 LAMB3Q13751 1172 aa16.33■□□□□ 0.2
CXCL1-201ENST00000395761 LRP8Q14114 963 aa16.33■□□□□ 0.2
CXCL1-201ENST00000395761 NR0B2Q15466 257 aa16.33■□□□□ 0.2
CXCL1-201ENST00000395761 PLA2G4EQ3MJ16 856 aa16.33■□□□□ 0.2
CXCL1-201ENST00000395761 GPR33Q49SQ1 333 aa16.33■□□□□ 0.2
CXCL1-201ENST00000395761 DUPD1Q68J44 220 aa16.33■□□□□ 0.2
CXCL1-201ENST00000395761 GUSBP11Q6P575 273 aa16.33■□□□□ 0.2
CXCL1-201ENST00000395761 OGFOD3Q6PK18 319 aa16.33■□□□□ 0.2
CXCL1-201ENST00000395761 CES3Q6UWW8 571 aa16.33■□□□□ 0.2
CXCL1-201ENST00000395761 NLRP9Q7RTR0 991 aa16.33■□□□□ 0.2
CXCL1-201ENST00000395761 TAS2R42Q7RTR8 314 aa16.33■□□□□ 0.2
CXCL1-201ENST00000395761 PPIL6Q8IXY8 311 aa16.33■□□□□ 0.2
CXCL1-201ENST00000395761 SEC14L1Q92503 715 aa16.33■□□□□ 0.2
CXCL1-201ENST00000395761 ULK4Q96C45 1275 aa16.33■□□□□ 0.2
CXCL1-201ENST00000395761 SGF29Q96ES7 293 aa16.33■□□□□ 0.2
CXCL1-201ENST00000395761 TTC25Q96NG3 672 aa16.33■□□□□ 0.2
CXCL1-201ENST00000395761 SERPINB12Q96P63 405 aa16.33■□□□□ 0.2
CXCL1-201ENST00000395761 KIFC1Q9BW19 673 aa16.33■□□□□ 0.2
CXCL1-201ENST00000395761 APOBEC2Q9Y235 224 aaKnown RBP16.33■□□□□ 0.2
CXCL1-201ENST00000395761 BPTFQ12830 3046 aa16.33■□□□□ 0.2
CXCL1-201ENST00000395761 PLXNB3Q9ULL4 1909 aa16.33■□□□□ 0.2
CXCL1-201ENST00000395761 CPED1A4D0V7 1026 aa16.32■□□□□ 0.2
CXCL1-201ENST00000395761 OR2AG2A6NM03 316 aa16.32■□□□□ 0.2
CXCL1-201ENST00000395761 EML2O95834 649 aa16.32■□□□□ 0.2
CXCL1-201ENST00000395761 GOT2P00505 430 aaKnown RBP16.32■□□□□ 0.2
CXCL1-201ENST00000395761 MLNP12872 115 aa16.32■□□□□ 0.2
CXCL1-201ENST00000395761 ZNF7P17097 686 aaPredicted RBP16.32■□□□□ 0.2
CXCL1-201ENST00000395761 AKT1P31749 480 aa16.32■□□□□ 0.2
CXCL1-201ENST00000395761 FOXN2P32314 431 aa16.32■□□□□ 0.2
CXCL1-201ENST00000395761 GTF2H3Q13889 308 aa16.32■□□□□ 0.2
CXCL1-201ENST00000395761 IZUMO3Q5VZ72 239 aa16.32■□□□□ 0.2
CXCL1-201ENST00000395761 TMEM220Q6QAJ8 160 aa16.32■□□□□ 0.2
CXCL1-201ENST00000395761 DET1Q7L5Y6 550 aa16.32■□□□□ 0.2
CXCL1-201ENST00000395761 C11orf96Q7Z7L8 435 aa16.32■□□□□ 0.2
CXCL1-201ENST00000395761 LRRTM4Q86VH4 590 aa16.32■□□□□ 0.2
CXCL1-201ENST00000395761 SERPINA9Q86WD7 417 aa16.32■□□□□ 0.2
CXCL1-201ENST00000395761 TRAPPC5Q8IUR0 188 aa16.32■□□□□ 0.2
CXCL1-201ENST00000395761 AGGF1Q8N302 714 aaeCLIP16.32■□□□□ 0.2
CXCL1-201ENST00000395761 BEND7Q8N7W2 519 aaPredicted RBP16.32■□□□□ 0.2
CXCL1-201ENST00000395761 ARL10Q8N8L6 244 aa16.32■□□□□ 0.2
CXCL1-201ENST00000395761 GPR156Q8NFN8 814 aa16.32■□□□□ 0.2
CXCL1-201ENST00000395761 OR6P1Q8NGX9 317 aa16.32■□□□□ 0.2
CXCL1-201ENST00000395761 ZDHHC1Q8WTX9 485 aa16.32■□□□□ 0.2
CXCL1-201ENST00000395761 PATE1Q8WXA2 126 aa16.32■□□□□ 0.2
CXCL1-201ENST00000395761 TRIM56Q9BRZ2 755 aaKnown RBP16.32■□□□□ 0.2
CXCL1-201ENST00000395761 TRIM31Q9BZY9 425 aa16.32■□□□□ 0.2
CXCL1-201ENST00000395761 RAB17Q9H0T7 212 aa16.32■□□□□ 0.2
CXCL1-201ENST00000395761 XAB2Q9HCS7 855 aaKnown RBP16.32■□□□□ 0.2
CXCL1-201ENST00000395761 KLC4Q9NSK0 619 aa16.32■□□□□ 0.2
CXCL1-201ENST00000395761 TREX1Q9NSU2 369 aa16.32■□□□□ 0.2
CXCL1-201ENST00000395761 PADI4Q9UM07 663 aa16.32■□□□□ 0.2
CXCL1-201ENST00000395761 UTP11Q9Y3A2 253 aaKnown RBP16.32■□□□□ 0.2
CXCL1-201ENST00000395761 EME2A4GXA9 379 aaPredicted RBP16.31■□□□□ 0.2
CXCL1-201ENST00000395761 KMOO15229 486 aa16.31■□□□□ 0.2
CXCL1-201ENST00000395761 SGTAO43765 313 aa16.31■□□□□ 0.2
CXCL1-201ENST00000395761 RFPL3O75679 317 aa16.31■□□□□ 0.2
CXCL1-201ENST00000395761 ADRB1P08588 477 aa16.31■□□□□ 0.2
CXCL1-201ENST00000395761 ACRV1P26436 265 aa16.31■□□□□ 0.2
CXCL1-201ENST00000395761 MAGEA3P43357 314 aa16.31■□□□□ 0.2
CXCL1-201ENST00000395761 DUSP3P51452 185 aaPredicted RBP16.31■□□□□ 0.2
CXCL1-201ENST00000395761 FOXC1Q12948 553 aa16.31■□□□□ 0.2
CXCL1-201ENST00000395761 DBN1Q16643 649 aa16.31■□□□□ 0.2
CXCL1-201ENST00000395761 PERM1Q5SV97 790 aa16.31■□□□□ 0.2
CXCL1-201ENST00000395761 FNBP1LQ5T0N5 605 aa16.31■□□□□ 0.2
CXCL1-201ENST00000395761 DHRS13Q6UX07 377 aa16.31■□□□□ 0.2
CXCL1-201ENST00000395761 EFL1Q7Z2Z2 1120 aaKnown RBP16.31■□□□□ 0.2
CXCL1-201ENST00000395761 CHCHD4Q8N4Q1 142 aa16.31■□□□□ 0.2
CXCL1-201ENST00000395761 IFI44Q8TCB0 444 aa16.31■□□□□ 0.2
CXCL1-201ENST00000395761 ADAMTS14Q8WXS8 1223 aa16.31■□□□□ 0.2
CXCL1-201ENST00000395761 PEX13Q92968 403 aa16.31■□□□□ 0.2
CXCL1-201ENST00000395761 GLMNQ92990 594 aa16.31■□□□□ 0.2
CXCL1-201ENST00000395761 MFSD3Q96ES6 412 aa16.31■□□□□ 0.2
CXCL1-201ENST00000395761 COPS8Q99627 209 aa16.31■□□□□ 0.2
CXCL1-201ENST00000395761 ZCCHC2Q9C0B9 1178 aaKnown RBP16.31■□□□□ 0.2
CXCL1-201ENST00000395761 ZDHHC3Q9NYG2 299 aa16.31■□□□□ 0.2
CXCL1-201ENST00000395761 NCKIPSDQ9NZQ3 722 aa16.31■□□□□ 0.2
CXCL1-201ENST00000395761 TBC1D29Q9UFV1 150 aa16.31■□□□□ 0.2
CXCL1-201ENST00000395761 SOX13Q9UN79 622 aa16.31■□□□□ 0.2
CXCL1-201ENST00000395761 DNAJC16Q9Y2G8 782 aa16.31■□□□□ 0.2
CXCL1-201ENST00000395761 PCDHGA1Q9Y5H4 931 aa16.31■□□□□ 0.2
CXCL1-201ENST00000395761 TRBV23OR9-2A0A075B6M9 112 aa16.3■□□□□ 0.2
CXCL1-201ENST00000395761 SDR42E2A6NKP2 422 aa16.3■□□□□ 0.2
CXCL1-201ENST00000395761 CASC3O15234 703 aaKnown RBP16.3■□□□□ 0.2
CXCL1-201ENST00000395761 SNX2O60749 519 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms