RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 TRBV5-4A0A0C4DH59 114 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 TSPAN11A1L157 253 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 GOLGA8CPA6NN73 597 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 NPHS1O60500 1241 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 VPS26AO75436 327 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 DNAJC8O75937 253 aaPredicted RBP19.1■□□□□ 0.65
LMNB1-202ENST00000395354 CLDN7O95471 211 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 UGT2B4P06133 528 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 ITGALP20701 1170 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 NFKBIAP25963 317 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 SPAM1P38567 509 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 CXCL12P48061 93 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 CDKN1CP49918 316 aaPredicted RBP19.1■□□□□ 0.65
LMNB1-202ENST00000395354 RPS14P62263 151 aaKnown RBP19.1■□□□□ 0.65
LMNB1-202ENST00000395354 RCN2Q14257 317 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 FAM46CQ5VWP2 391 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 FAM91A1Q658Y4 838 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 ZNF776Q68DI1 518 aaPredicted RBP19.1■□□□□ 0.65
LMNB1-202ENST00000395354 CRTC1Q6UUV9 634 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 MAMSTRQ6ZN01 415 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 TAS2R42Q7RTR8 314 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 PIWIL4Q7Z3Z4 852 aaKnown RBP19.1■□□□□ 0.65
LMNB1-202ENST00000395354 PIM3Q86V86 326 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 SPATA6LQ8N4H0 392 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 RHEBL1Q8TAI7 183 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 SKA1Q96BD8 255 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 KLHL32Q96NJ5 620 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 ZFP69BQ9UJL9 534 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.1■□□□□ 0.65
LMNB1-202ENST00000395354 NPIPB15A6NHN6 443 aaPredicted RBP19.1■□□□□ 0.65
LMNB1-202ENST00000395354 KPNA3O00505 521 aaPredicted RBP19.1■□□□□ 0.65
LMNB1-202ENST00000395354 GAPDHSO14556 408 aaPredicted RBP19.1■□□□□ 0.65
LMNB1-202ENST00000395354 CD1DP15813 335 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 BPIP17213 487 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 TFEBP19484 476 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 RPS3P23396 243 aaKnown RBP eCLIP19.1■□□□□ 0.658e-7■■■□□ 17.9
LMNB1-202ENST00000395354 PSMD8P48556 350 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 AQP5P55064 265 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 ATP6V0D1P61421 351 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 CST6Q15828 149 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 POM121L1PQ3SYA9 428 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 UGT3A1Q6NUS8 523 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 ISCA2Q86U28 154 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 MTDHQ86UE4 582 aaKnown RBP19.1■□□□□ 0.65
LMNB1-202ENST00000395354 FBXL6Q8N531 539 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 NKAPQ8N5F7 415 aaKnown RBP19.1■□□□□ 0.65
LMNB1-202ENST00000395354 TSTD1Q8NFU3 115 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 KCNJ9Q92806 393 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 MRGPRX1Q96LB2 322 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 TUBB6Q9BUF5 446 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 DERL2Q9GZP9 239 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 ILKAPQ9H0C8 392 aaPredicted RBP19.1■□□□□ 0.65
LMNB1-202ENST00000395354 SLC6A17Q9H1V8 727 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 P2RY12Q9H244 342 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 TFB2MQ9H5Q4 396 aaKnown RBP19.1■□□□□ 0.65
LMNB1-202ENST00000395354 IL26Q9NPH9 171 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 SAR1AQ9NR31 198 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 TXLNGQ9NUQ3 528 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 DNAJC28Q9NX36 388 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 MED16Q9Y2X0 877 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 RAP2CQ9Y3L5 183 aa19.1■□□□□ 0.65
LMNB1-202ENST00000395354 ZNF106Q9H2Y7 1883 aaKnown RBP19.09■□□□□ 0.65
LMNB1-202ENST00000395354 CACNA1IQ9P0X4 2223 aa19.09■□□□□ 0.65
LMNB1-202ENST00000395354 GLYATL1P3A0A0U1RQE8 302 aa19.09■□□□□ 0.65
LMNB1-202ENST00000395354 C1QTNF3-AMACRE9PGA6 284 aa19.09■□□□□ 0.65
LMNB1-202ENST00000395354 SLC34A2O95436 690 aa19.09■□□□□ 0.65
LMNB1-202ENST00000395354 PRAMEF1O95521 474 aa19.09■□□□□ 0.65
LMNB1-202ENST00000395354 KITP10721 976 aa19.09■□□□□ 0.65
LMNB1-202ENST00000395354 ZNF7P17097 686 aaPredicted RBP19.09■□□□□ 0.65
LMNB1-202ENST00000395354 GABRG2P18507 467 aa19.09■□□□□ 0.65
LMNB1-202ENST00000395354 ARRB2P32121 409 aa19.09■□□□□ 0.65
LMNB1-202ENST00000395354 NAGLUP54802 743 aa19.09■□□□□ 0.65
LMNB1-202ENST00000395354 ZBTB16Q05516 673 aa19.09■□□□□ 0.65
LMNB1-202ENST00000395354 NFATC2Q13469 925 aa19.09■□□□□ 0.65
LMNB1-202ENST00000395354 ZNF805Q5CZA5 627 aa19.09■□□□□ 0.65
LMNB1-202ENST00000395354 CLNKQ7Z7G1 428 aa19.09■□□□□ 0.65
LMNB1-202ENST00000395354 CACUL1Q86Y37 369 aa19.09■□□□□ 0.65
LMNB1-202ENST00000395354 HMGB4Q8WW32 186 aa19.09■□□□□ 0.65
LMNB1-202ENST00000395354 STON2Q8WXE9 905 aa19.09■□□□□ 0.65
LMNB1-202ENST00000395354 SIPA1Q96FS4 1042 aa19.09■□□□□ 0.65
LMNB1-202ENST00000395354 CNDP1Q96KN2 507 aa19.09■□□□□ 0.65
LMNB1-202ENST00000395354 HHIPQ96QV1 700 aa19.09■□□□□ 0.65
LMNB1-202ENST00000395354 SPATA6Q9NWH7 488 aaPredicted RBP19.09■□□□□ 0.65
LMNB1-202ENST00000395354 NCKIPSDQ9NZQ3 722 aa19.09■□□□□ 0.65
LMNB1-202ENST00000395354 DKK3Q9UBP4 350 aa19.09■□□□□ 0.65
LMNB1-202ENST00000395354 MARCOQ9UEW3 520 aaPredicted RBP19.09■□□□□ 0.65
LMNB1-202ENST00000395354 A0A0U1RQS6 177 aa19.08■□□□□ 0.65
LMNB1-202ENST00000395354 H3BMM5 538 aa19.08■□□□□ 0.65
LMNB1-202ENST00000395354 PRMT5O14744 637 aaPredicted RBP19.08■□□□□ 0.65
LMNB1-202ENST00000395354 CCDC22O60826 627 aa19.08■□□□□ 0.65
LMNB1-202ENST00000395354 IPO13O94829 963 aaKnown RBP19.08■□□□□ 0.65
LMNB1-202ENST00000395354 ADH1BP00325 375 aa19.08■□□□□ 0.65
LMNB1-202ENST00000395354 CYP2A6P11509 494 aaPredicted RBP19.08■□□□□ 0.65
LMNB1-202ENST00000395354 ZNF30P17039 623 aa19.08■□□□□ 0.65
LMNB1-202ENST00000395354 CCR3P51677 355 aa19.08■□□□□ 0.65
LMNB1-202ENST00000395354 NFKB2Q00653 900 aa19.08■□□□□ 0.65
LMNB1-202ENST00000395354 PRKAA1Q13131 559 aa19.08■□□□□ 0.65
LMNB1-202ENST00000395354 SETMARQ53H47 684 aaPredicted RBP19.08■□□□□ 0.65
LMNB1-202ENST00000395354 CTSL3PQ5NE16 218 aa19.08■□□□□ 0.65
LMNB1-202ENST00000395354 FAM151BQ6UXP7 276 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms