RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 FBXO5Q9UKT4 447 aa11.35□□□□□ -0.59
RTN1-203ENST00000395090 PKP3Q9Y446 797 aa11.35□□□□□ -0.59
RTN1-203ENST00000395090 SLC22A31A6NKX4 558 aa11.34□□□□□ -0.59
RTN1-203ENST00000395090 UPK3BL1B0FP48 263 aa11.34□□□□□ -0.59
RTN1-203ENST00000395090 C1QTNF9BB2RNN3 333 aa11.34□□□□□ -0.59
RTN1-203ENST00000395090 TRIM49D1C9J1S8 452 aa11.34□□□□□ -0.59
RTN1-203ENST00000395090 UPK3BL2E5RIL1 263 aa11.34□□□□□ -0.59
RTN1-203ENST00000395090 CCL22O00626 93 aa11.34□□□□□ -0.59
RTN1-203ENST00000395090 CD3EAPO15446 510 aaKnown RBP11.34□□□□□ -0.59
RTN1-203ENST00000395090 DNAJA2O60884 412 aa11.34□□□□□ -0.59
RTN1-203ENST00000395090 RFPL1O75677 317 aa11.34□□□□□ -0.59
RTN1-203ENST00000395090 ITGA2BP08514 1039 aa11.34□□□□□ -0.59
RTN1-203ENST00000395090 CREB1P16220 341 aa11.34□□□□□ -0.59
RTN1-203ENST00000395090 ZNF30P17039 623 aa11.34□□□□□ -0.59
RTN1-203ENST00000395090 NR1D1P20393 614 aa11.34□□□□□ -0.59
RTN1-203ENST00000395090 LHCGRP22888 699 aa11.34□□□□□ -0.59
RTN1-203ENST00000395090 ITGB7P26010 798 aa11.34□□□□□ -0.59
RTN1-203ENST00000395090 NTSR1P30989 418 aa11.34□□□□□ -0.59
RTN1-203ENST00000395090 SPRP35270 261 aaPredicted RBP11.34□□□□□ -0.59
RTN1-203ENST00000395090 POLD2P49005 469 aa11.34□□□□□ -0.59
RTN1-203ENST00000395090 LIMK2P53671 638 aa11.34□□□□□ -0.59
RTN1-203ENST00000395090 SLC18A1P54219 525 aa11.34□□□□□ -0.59
RTN1-203ENST00000395090 MRPS21P82921 87 aaKnown RBP11.34□□□□□ -0.59
RTN1-203ENST00000395090 TMPRSS15P98073 1019 aa11.34□□□□□ -0.59
RTN1-203ENST00000395090 XIAPP98170 497 aa11.34□□□□□ -0.59
RTN1-203ENST00000395090 GABPB1Q06547 395 aaPredicted RBP11.34□□□□□ -0.59
RTN1-203ENST00000395090 DMTNQ08495 405 aa11.34□□□□□ -0.59
RTN1-203ENST00000395090 ILF2Q12905 390 aaKnown RBP11.34□□□□□ -0.59
RTN1-203ENST00000395090 CTBP1Q13363 440 aa11.34□□□□□ -0.59
RTN1-203ENST00000395090 PEX6Q13608 980 aa11.34□□□□□ -0.59
RTN1-203ENST00000395090 LRRC66Q68CR7 880 aa11.34□□□□□ -0.59
RTN1-203ENST00000395090 ZNF470Q6ECI4 717 aa11.34□□□□□ -0.59
RTN1-203ENST00000395090 CDPF1Q6NVV7 123 aa11.34□□□□□ -0.59
RTN1-203ENST00000395090 PTAR1Q7Z6K3 402 aaPredicted RBP11.34□□□□□ -0.59
RTN1-203ENST00000395090 TTC7BQ86TV6 843 aa11.34□□□□□ -0.59
RTN1-203ENST00000395090 TSPAN33Q86UF1 283 aa11.34□□□□□ -0.59
RTN1-203ENST00000395090 ZC3HC1Q86WB0 502 aaKnown RBP11.34□□□□□ -0.59
RTN1-203ENST00000395090 DENND6AQ8IWF6 608 aa11.34□□□□□ -0.59
RTN1-203ENST00000395090 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.34□□□□□ -0.59
RTN1-203ENST00000395090 MRPL41Q8IXM3 137 aaKnown RBP11.34□□□□□ -0.59
RTN1-203ENST00000395090 SRRM1Q8IYB3 904 aaKnown RBP11.34□□□□□ -0.59
RTN1-203ENST00000395090 PAF1Q8N7H5 531 aa11.34□□□□□ -0.59
RTN1-203ENST00000395090 FAM169BQ8N8A8 192 aa11.34□□□□□ -0.59
RTN1-203ENST00000395090 IL17RCQ8NAC3 791 aa11.34□□□□□ -0.59
RTN1-203ENST00000395090 PIP4K2CQ8TBX8 421 aa11.34□□□□□ -0.59
RTN1-203ENST00000395090 RSPH9Q9H1X1 276 aaPredicted RBP11.34□□□□□ -0.59
RTN1-203ENST00000395090 RHOJQ9H4E5 214 aa11.34□□□□□ -0.59
RTN1-203ENST00000395090 PCDH12Q9NPG4 1184 aa11.34□□□□□ -0.59
RTN1-203ENST00000395090 POLR3BQ9NW08 1133 aaPredicted RBP11.34□□□□□ -0.59
RTN1-203ENST00000395090 PCOLCE2Q9UKZ9 415 aa11.34□□□□□ -0.59
RTN1-203ENST00000395090 TCF20Q9UGU0 1960 aaKnown RBP11.33□□□□□ -0.6
RTN1-203ENST00000395090 OR51F1A6NGY5 319 aa11.33□□□□□ -0.6
RTN1-203ENST00000395090 MT-ND3P03897 115 aa11.33□□□□□ -0.6
RTN1-203ENST00000395090 CYP2A6P11509 494 aaPredicted RBP11.33□□□□□ -0.6
RTN1-203ENST00000395090 NFKBIAP25963 317 aa11.33□□□□□ -0.6
RTN1-203ENST00000395090 FOXN2P32314 431 aa11.33□□□□□ -0.6
RTN1-203ENST00000395090 SLC1A2P43004 574 aa11.33□□□□□ -0.6
RTN1-203ENST00000395090 CSRP3P50461 194 aa11.33□□□□□ -0.6
RTN1-203ENST00000395090 PPP2R2AP63151 447 aa11.33□□□□□ -0.6
RTN1-203ENST00000395090 SLC18A2Q05940 514 aa11.33□□□□□ -0.6
RTN1-203ENST00000395090 NKG7Q16617 165 aa11.33□□□□□ -0.6
RTN1-203ENST00000395090 TYSND1Q2T9J0 566 aa11.33□□□□□ -0.6
RTN1-203ENST00000395090 FBXO43Q4G163 708 aa11.33□□□□□ -0.6
RTN1-203ENST00000395090 MROH9Q5TGP6 573 aa11.33□□□□□ -0.6
RTN1-203ENST00000395090 FAM46CQ5VWP2 391 aa11.33□□□□□ -0.6
RTN1-203ENST00000395090 SLC6A19Q695T7 634 aa11.33□□□□□ -0.6
RTN1-203ENST00000395090 MRNIPQ6NTE8 343 aa11.33□□□□□ -0.6
RTN1-203ENST00000395090 AFTPHQ6ULP2 937 aa11.33□□□□□ -0.6
RTN1-203ENST00000395090 KDM7AQ6ZMT4 941 aa11.33□□□□□ -0.6
RTN1-203ENST00000395090 DPPA4Q7L190 304 aa11.33□□□□□ -0.6
RTN1-203ENST00000395090 PARS2Q7L3T8 475 aaKnown RBP11.33□□□□□ -0.6
RTN1-203ENST00000395090 UBE3DQ7Z6J8 389 aa11.33□□□□□ -0.6
RTN1-203ENST00000395090 ADHFE1Q8IWW8 467 aa11.33□□□□□ -0.6
RTN1-203ENST00000395090 RAVER1Q8IY67 606 aaKnown RBP11.33□□□□□ -0.6
RTN1-203ENST00000395090 FAM13CQ8NE31 585 aa11.33□□□□□ -0.6
RTN1-203ENST00000395090 FAM76AQ8TAV0 307 aa11.33□□□□□ -0.6
RTN1-203ENST00000395090 DTX3LQ8TDB6 740 aa11.33□□□□□ -0.6
RTN1-203ENST00000395090 FBLIM1Q8WUP2 373 aa11.33□□□□□ -0.6
RTN1-203ENST00000395090 FAM3CQ92520 227 aa11.33□□□□□ -0.6
RTN1-203ENST00000395090 SERAC1Q96JX3 654 aa11.33□□□□□ -0.6
RTN1-203ENST00000395090 TM9SF2Q99805 663 aa11.33□□□□□ -0.6
RTN1-203ENST00000395090 HDAC8Q9BY41 377 aa11.33□□□□□ -0.6
RTN1-203ENST00000395090 CD248Q9HCU0 757 aa11.33□□□□□ -0.6
RTN1-203ENST00000395090 BPIFA1Q9NP55 256 aa11.33□□□□□ -0.6
RTN1-203ENST00000395090 ZDHHC4Q9NPG8 344 aa11.33□□□□□ -0.6
RTN1-203ENST00000395090 IL26Q9NPH9 171 aa11.33□□□□□ -0.6
RTN1-203ENST00000395090 MARCH4Q9P2E8 410 aaPredicted RBP11.33□□□□□ -0.6
RTN1-203ENST00000395090 B4GALT6Q9UBX8 382 aa11.33□□□□□ -0.6
RTN1-203ENST00000395090 DUSP12Q9UNI6 340 aa11.33□□□□□ -0.6
RTN1-203ENST00000395090 RGSL1A5PLK6 1076 aa11.32□□□□□ -0.6
RTN1-203ENST00000395090 AGAP14A8MT82 685 aa11.32□□□□□ -0.6
RTN1-203ENST00000395090 KPNA3O00505 521 aaPredicted RBP11.32□□□□□ -0.6
RTN1-203ENST00000395090 MAN2B1O00754 1011 aa11.32□□□□□ -0.6
RTN1-203ENST00000395090 GAPDHSO14556 408 aaPredicted RBP11.32□□□□□ -0.6
RTN1-203ENST00000395090 AREL1O15033 823 aa11.32□□□□□ -0.6
RTN1-203ENST00000395090 POLR3GO15318 223 aaPredicted RBP11.32□□□□□ -0.6
RTN1-203ENST00000395090 SYNCRIPO60506 623 aaKnown RBP11.32□□□□□ -0.6
RTN1-203ENST00000395090 ADAM23O75077 832 aa11.32□□□□□ -0.6
RTN1-203ENST00000395090 HAUS5O94927 633 aa11.32□□□□□ -0.6
RTN1-203ENST00000395090 ALDOAP04075 364 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms