RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 USP3Q9Y6I4 520 aa13.12□□□□□ -0.31
NFKB1-202ENST00000394820 A0A087X1B8 175 aa13.11□□□□□ -0.31
NFKB1-202ENST00000394820 G3V2T6 193 aa13.11□□□□□ -0.31
NFKB1-202ENST00000394820 KPNA4O00629 521 aaPredicted RBP13.11□□□□□ -0.31
NFKB1-202ENST00000394820 PSMD3O43242 534 aa13.11□□□□□ -0.31
NFKB1-202ENST00000394820 C1QAP02745 245 aa13.11□□□□□ -0.31
NFKB1-202ENST00000394820 PRDX3P30048 256 aaKnown RBP13.11□□□□□ -0.31
NFKB1-202ENST00000394820 GLUD2P49448 558 aa13.11□□□□□ -0.31
NFKB1-202ENST00000394820 CLCQ05315 142 aa13.11□□□□□ -0.31
NFKB1-202ENST00000394820 R3HCC1LQ7Z5L2 792 aaKnown RBP13.11□□□□□ -0.31
NFKB1-202ENST00000394820 RETREG3Q86VR2 466 aa13.11□□□□□ -0.31
NFKB1-202ENST00000394820 GPSM1Q86YR5 675 aa13.11□□□□□ -0.31
NFKB1-202ENST00000394820 HS6ST3Q8IZP7 471 aa13.11□□□□□ -0.31
NFKB1-202ENST00000394820 TMBIM1Q969X1 311 aa13.11□□□□□ -0.31
NFKB1-202ENST00000394820 DMRTB1Q96MA1 342 aa13.11□□□□□ -0.31
NFKB1-202ENST00000394820 COMMD8Q9NX08 183 aa13.11□□□□□ -0.31
NFKB1-202ENST00000394820 HSFX1Q9UBD0 423 aa13.11□□□□□ -0.31
NFKB1-202ENST00000394820 GPR39O43194 453 aa13.11□□□□□ -0.31
NFKB1-202ENST00000394820 ZNF26P17031 533 aaPredicted RBP13.11□□□□□ -0.31
NFKB1-202ENST00000394820 POLR2IP36954 125 aaKnown RBP13.11□□□□□ -0.31
NFKB1-202ENST00000394820 CRHR2Q13324 411 aa13.11□□□□□ -0.31
NFKB1-202ENST00000394820 ZNF621Q6ZSS3 439 aa13.11□□□□□ -0.31
NFKB1-202ENST00000394820 AHSA2Q719I0 299 aa13.11□□□□□ -0.31
NFKB1-202ENST00000394820 GLT6D1Q7Z4J2 308 aa13.11□□□□□ -0.31
NFKB1-202ENST00000394820 C14orf80Q86SX3 495 aa13.11□□□□□ -0.31
NFKB1-202ENST00000394820 LSMEM2Q8N112 164 aa13.11□□□□□ -0.31
NFKB1-202ENST00000394820 ZIC5Q96T25 663 aa13.11□□□□□ -0.31
NFKB1-202ENST00000394820 ATAD3AQ9NVI7 634 aa13.11□□□□□ -0.31
NFKB1-202ENST00000394820 ZDHHC7Q9NXF8 308 aa13.11□□□□□ -0.31
NFKB1-202ENST00000394820 SEPT3Q9UH03 358 aa13.11□□□□□ -0.31
NFKB1-202ENST00000394820 PSMD11O00231 422 aa13.11□□□□□ -0.31
NFKB1-202ENST00000394820 NIPSNAP2O75323 286 aa13.11□□□□□ -0.31
NFKB1-202ENST00000394820 GOT2P00505 430 aaKnown RBP13.11□□□□□ -0.31
NFKB1-202ENST00000394820 MYCLP1P12525 358 aaPredicted RBP13.11□□□□□ -0.31
NFKB1-202ENST00000394820 S100A5P33763 92 aa13.11□□□□□ -0.31
NFKB1-202ENST00000394820 CAPGP40121 348 aa13.11□□□□□ -0.31
NFKB1-202ENST00000394820 SERPINB10P48595 397 aa13.11□□□□□ -0.31
NFKB1-202ENST00000394820 SH3BP2P78314 561 aa13.11□□□□□ -0.31
NFKB1-202ENST00000394820 PRKG2Q13237 762 aa13.11□□□□□ -0.31
NFKB1-202ENST00000394820 KCNA10Q16322 511 aa13.11□□□□□ -0.31
NFKB1-202ENST00000394820 MAPKAPK3Q16644 382 aa13.11□□□□□ -0.31
NFKB1-202ENST00000394820 ANKRD34AQ69YU3 496 aa13.11□□□□□ -0.31
NFKB1-202ENST00000394820 DET1Q7L5Y6 550 aa13.11□□□□□ -0.31
NFKB1-202ENST00000394820 RASAL3Q86YV0 1011 aa13.11□□□□□ -0.31
NFKB1-202ENST00000394820 OR52J3Q8NH60 311 aa13.11□□□□□ -0.31
NFKB1-202ENST00000394820 HMCESQ96FZ2 354 aa13.11□□□□□ -0.31
NFKB1-202ENST00000394820 C11orf84Q9BUA3 381 aaPredicted RBP13.11□□□□□ -0.31
NFKB1-202ENST00000394820 ACTR8Q9H981 624 aa13.11□□□□□ -0.31
NFKB1-202ENST00000394820 CATSPERZQ9NTU4 200 aa13.11□□□□□ -0.31
NFKB1-202ENST00000394820 OLAHQ9NV23 265 aa13.11□□□□□ -0.31
NFKB1-202ENST00000394820 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.1□□□□□ -0.31
NFKB1-202ENST00000394820 TSC22D2O75157 780 aa13.1□□□□□ -0.31
NFKB1-202ENST00000394820 VPS26AO75436 327 aa13.1□□□□□ -0.31
NFKB1-202ENST00000394820 CNTN5O94779 1100 aa13.1□□□□□ -0.31
NFKB1-202ENST00000394820 THRBP10828 461 aa13.1□□□□□ -0.31
NFKB1-202ENST00000394820 POU2F1P14859 743 aa13.1□□□□□ -0.31
NFKB1-202ENST00000394820 KCNC1P48547 511 aa13.1□□□□□ -0.31
NFKB1-202ENST00000394820 PRKAA2P54646 552 aa13.1□□□□□ -0.31
NFKB1-202ENST00000394820 ARMC12Q5T9G4 340 aa13.1□□□□□ -0.31
NFKB1-202ENST00000394820 ERMP1Q7Z2K6 904 aa13.1□□□□□ -0.31
NFKB1-202ENST00000394820 CLIP4Q8N3C7 705 aa13.1□□□□□ -0.31
NFKB1-202ENST00000394820 ZBTB8BQ8NAP8 495 aaPredicted RBP13.1□□□□□ -0.31
NFKB1-202ENST00000394820 SPPL2AQ8TCT8 520 aa13.1□□□□□ -0.31
NFKB1-202ENST00000394820 ZNF696Q9H7X3 374 aa13.1□□□□□ -0.31
NFKB1-202ENST00000394820 PARVBQ9HBI1 364 aa13.1□□□□□ -0.31
NFKB1-202ENST00000394820 ZNF195O14628 629 aa13.1□□□□□ -0.31
NFKB1-202ENST00000394820 AKT1P31749 480 aa13.1□□□□□ -0.31
NFKB1-202ENST00000394820 POLR2JP52435 117 aaKnown RBP13.1□□□□□ -0.31
NFKB1-202ENST00000394820 CDKN2DP55273 166 aa13.1□□□□□ -0.31
NFKB1-202ENST00000394820 TBX4P57082 545 aa13.1□□□□□ -0.31
NFKB1-202ENST00000394820 OR4D2P58180 307 aa13.1□□□□□ -0.31
NFKB1-202ENST00000394820 PTPRRQ15256 657 aa13.1□□□□□ -0.31
NFKB1-202ENST00000394820 FAM117BQ6P1L5 589 aa13.1□□□□□ -0.31
NFKB1-202ENST00000394820 ZNF280BQ86YH2 543 aa13.1□□□□□ -0.31
NFKB1-202ENST00000394820 FBXO32Q969P5 355 aa13.1□□□□□ -0.31
NFKB1-202ENST00000394820 LINGO1Q96FE5 620 aa13.1□□□□□ -0.31
NFKB1-202ENST00000394820 ASIC4Q96FT7 647 aa13.1□□□□□ -0.31
NFKB1-202ENST00000394820 HMG20AQ9NP66 347 aa13.1□□□□□ -0.31
NFKB1-202ENST00000394820 SMIM30A4D0T7 59 aa13.1□□□□□ -0.31
NFKB1-202ENST00000394820 TAF4O00268 1085 aa13.1□□□□□ -0.31
NFKB1-202ENST00000394820 SNAP91O60641 907 aa13.1□□□□□ -0.31
NFKB1-202ENST00000394820 CAPN1P07384 714 aa13.1□□□□□ -0.31
NFKB1-202ENST00000394820 MAP2K4P45985 399 aa13.1□□□□□ -0.31
NFKB1-202ENST00000394820 NEK2P51955 445 aa13.1□□□□□ -0.31
NFKB1-202ENST00000394820 FAM189BP81408 668 aa13.1□□□□□ -0.31
NFKB1-202ENST00000394820 PAFAH1B3Q15102 231 aaKnown RBP13.1□□□□□ -0.31
NFKB1-202ENST00000394820 CST9Q5W186 159 aa13.1□□□□□ -0.31
NFKB1-202ENST00000394820 GLB1LQ6UWU2 654 aa13.1□□□□□ -0.31
NFKB1-202ENST00000394820 NECAB2Q7Z6G3 386 aa13.1□□□□□ -0.31
NFKB1-202ENST00000394820 TMEM86AQ8N2M4 240 aa13.1□□□□□ -0.31
NFKB1-202ENST00000394820 SIDT2Q8NBJ9 832 aaKnown RBP13.1□□□□□ -0.31
NFKB1-202ENST00000394820 OR2T12Q8NG77 320 aa13.1□□□□□ -0.31
NFKB1-202ENST00000394820 CNIH3Q8TBE1 160 aa13.1□□□□□ -0.31
NFKB1-202ENST00000394820 BIRC7Q96CA5 298 aa13.1□□□□□ -0.31
NFKB1-202ENST00000394820 PRRG3Q9BZD7 231 aa13.1□□□□□ -0.31
NFKB1-202ENST00000394820 OSBPL2Q9H1P3 480 aa13.1□□□□□ -0.31
NFKB1-202ENST00000394820 HIPK3Q9H422 1215 aa13.1□□□□□ -0.31
NFKB1-202ENST00000394820 TOR3AQ9H497 397 aa13.1□□□□□ -0.31
NFKB1-202ENST00000394820 PCDH10Q9P2E7 1040 aa13.1□□□□□ -0.31
NFKB1-202ENST00000394820 PRKAB1Q9Y478 270 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms