RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 RBM4BQ9BQ04 359 aaKnown RBP11.56□□□□□ -0.56
UBE2D3-209ENST00000394804 RBM4Q9BWF3 364 aaKnown RBP11.56□□□□□ -0.56
UBE2D3-209ENST00000394804 ANKRD60Q9BZ19 345 aa11.56□□□□□ -0.56
UBE2D3-209ENST00000394804 POPDC3Q9HBV1 291 aa11.56□□□□□ -0.56
UBE2D3-209ENST00000394804 MARCH4Q9P2E8 410 aaPredicted RBP11.56□□□□□ -0.56
UBE2D3-209ENST00000394804 SLC45A1Q9Y2W3 748 aa11.56□□□□□ -0.56
UBE2D3-209ENST00000394804 NME7Q9Y5B8 376 aa11.56□□□□□ -0.56
UBE2D3-209ENST00000394804 PCDHB9Q9Y5E1 797 aa11.56□□□□□ -0.56
UBE2D3-209ENST00000394804 RAI2Q9Y5P3 530 aa11.56□□□□□ -0.56
UBE2D3-209ENST00000394804 LCHNA4D1U4 455 aa11.56□□□□□ -0.56
UBE2D3-209ENST00000394804 SOCS2O14508 198 aa11.56□□□□□ -0.56
UBE2D3-209ENST00000394804 DUSP11O75319 330 aaKnown RBP11.56□□□□□ -0.56
UBE2D3-209ENST00000394804 CNTN5O94779 1100 aa11.56□□□□□ -0.56
UBE2D3-209ENST00000394804 ZBTB11O95625 1053 aaPredicted RBP11.56□□□□□ -0.56
UBE2D3-209ENST00000394804 CLIC3O95833 236 aa11.56□□□□□ -0.56
UBE2D3-209ENST00000394804 ANXA5P08758 320 aa11.56□□□□□ -0.56
UBE2D3-209ENST00000394804 DIO3P55073 304 aa11.56□□□□□ -0.56
UBE2D3-209ENST00000394804 SEMA3BQ13214 749 aa11.56□□□□□ -0.56
UBE2D3-209ENST00000394804 DGCR6Q14129 220 aa11.56□□□□□ -0.56
UBE2D3-209ENST00000394804 GK3PQ14409 553 aa11.56□□□□□ -0.56
UBE2D3-209ENST00000394804 ISCA2Q86U28 154 aa11.56□□□□□ -0.56
UBE2D3-209ENST00000394804 RAB2BQ8WUD1 216 aa11.56□□□□□ -0.56
UBE2D3-209ENST00000394804 ANKRD49Q8WVL7 239 aa11.56□□□□□ -0.56
UBE2D3-209ENST00000394804 L3HYPDHQ96EM0 354 aa11.56□□□□□ -0.56
UBE2D3-209ENST00000394804 DERL2Q9GZP9 239 aa11.56□□□□□ -0.56
UBE2D3-209ENST00000394804 KLHL25Q9H0H3 589 aa11.56□□□□□ -0.56
UBE2D3-209ENST00000394804 GSTO2Q9H4Y5 243 aa11.56□□□□□ -0.56
UBE2D3-209ENST00000394804 TMEM248Q9NWD8 314 aa11.56□□□□□ -0.56
UBE2D3-209ENST00000394804 IMPAD1Q9NX62 359 aa11.56□□□□□ -0.56
UBE2D3-209ENST00000394804 SMPD4Q9NXE4 827 aa11.56□□□□□ -0.56
UBE2D3-209ENST00000394804 FKBPLQ9UIM3 349 aa11.56□□□□□ -0.56
UBE2D3-209ENST00000394804 PCDHB1Q9Y5F3 818 aa11.56□□□□□ -0.56
UBE2D3-209ENST00000394804 DNAJC15Q9Y5T4 150 aa11.56□□□□□ -0.56
UBE2D3-209ENST00000394804 NUP205Q92621 2012 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 ELOVL7A1L3X0 281 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 MEIS3P2A8K0S8 358 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 INSIG1O15503 277 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 MAN1A2O60476 641 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 FYNP06241 537 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 CDH3P22223 829 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 KCNA5P22460 613 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 YAP1P46937 504 aaKnown RBP11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 RPL34P49207 117 aaKnown RBP11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 ARSDP51689 593 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 RAB15P59190 212 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 UFM1P61960 85 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 TAF1AQ15573 450 aaPredicted RBP11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 SYTL3Q4VX76 610 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 ARHGAP12Q8IWW6 846 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 SIDT2Q8NBJ9 832 aaKnown RBP11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 RHEBL1Q8TAI7 183 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 STON2Q8WXE9 905 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 TMEM74Q96NL1 305 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 IPPKQ9H8X2 491 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 TREX1Q9NSU2 369 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 DNAAF2Q9NVR5 837 aaKnown RBP11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 SMOXQ9NWM0 555 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 ARL15Q9NXU5 204 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 TMEM181Q9P2C4 612 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 CDC7O00311 574 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 NME4O00746 187 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 CLDN11O75508 207 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 TBX18O95935 607 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 CNPP09543 421 aaKnown RBP11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 C7P10643 843 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 HSD17B1P14061 328 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 ZNF12P17014 697 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 JAK1P23458 1154 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 GNPDA1P46926 289 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 EIF2B2P49770 351 aaKnown RBP11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 ENTPD1P49961 510 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 ECT2LQ008S8 904 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 BCL2L1Q07817 233 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 ZNF846Q147U1 533 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 MS4A13Q5J8X5 152 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 HECTD3Q5T447 861 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 GALNT18Q6P9A2 607 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 CRTC3Q6UUV7 619 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 MTFMTQ96DP5 389 aaKnown RBP11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 C1orf74Q96LT6 269 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 NSUN5Q96P11 429 aaKnown RBP11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 ARMC1Q9NVT9 282 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 GALPQ9UBC7 116 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 GTF2IRD1Q9UHL9 959 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 PCDHGC4Q9Y5F7 938 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 SSC5DA1L4H1 1573 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 TCRBV3S1A0A5B6 114 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 NIPSNAP2O75323 286 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 ESR1P03372 595 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 HOXB6P17509 224 aaKnown RBP11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 ACVRL1P37023 503 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 PTPRCAPQ14761 206 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 UPP1Q16831 310 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 LCN8Q6JVE9 175 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 OR9Q1Q8NGQ5 310 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 ZNF420Q8TAQ5 688 aaPredicted RBP11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 PEX13Q92968 403 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 BIRC8Q96P09 236 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 TMEM9Q9P0T7 183 aa11.55□□□□□ -0.56
UBE2D3-209ENST00000394804 PHF24Q9UPV7 400 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms