RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 PAGE2BQ5JRK9 111 aa15.99■□□□□ 0.15
PCDH1-203ENST00000394536 FAM110BQ8TC76 370 aa15.99■□□□□ 0.15
PCDH1-203ENST00000394536 RERGLQ9H628 205 aa15.99■□□□□ 0.15
PCDH1-203ENST00000394536 GREB1LQ9C091 1923 aaPredicted RBP15.99■□□□□ 0.15
PCDH1-203ENST00000394536 SIPA1L1O43166 1804 aa15.99■□□□□ 0.15
PCDH1-203ENST00000394536 KPNA6O60684 536 aa15.99■□□□□ 0.15
PCDH1-203ENST00000394536 ITGB1P05556 798 aa15.99■□□□□ 0.15
PCDH1-203ENST00000394536 ALDOCP09972 364 aaKnown RBP15.99■□□□□ 0.15
PCDH1-203ENST00000394536 UROSP10746 265 aa15.99■□□□□ 0.15
PCDH1-203ENST00000394536 PRDX3P30048 256 aaKnown RBP15.99■□□□□ 0.15
PCDH1-203ENST00000394536 HALP42357 657 aa15.99■□□□□ 0.15
PCDH1-203ENST00000394536 GDF5P43026 501 aa15.99■□□□□ 0.15
PCDH1-203ENST00000394536 TRPC1P48995 793 aa15.99■□□□□ 0.15
PCDH1-203ENST00000394536 MYBPC3Q14896 1274 aa15.99■□□□□ 0.15
PCDH1-203ENST00000394536 SPATA19Q7Z5L4 167 aa15.99■□□□□ 0.15
PCDH1-203ENST00000394536 EEF1AKMT1Q8WVE0 214 aa15.99■□□□□ 0.15
PCDH1-203ENST00000394536 TMBIM1Q969X1 311 aa15.99■□□□□ 0.15
PCDH1-203ENST00000394536 ZNF597Q96LX8 424 aa15.99■□□□□ 0.15
PCDH1-203ENST00000394536 SH3GL1Q99961 368 aa15.99■□□□□ 0.15
PCDH1-203ENST00000394536 CMTM6Q9NX76 183 aa15.99■□□□□ 0.15
PCDH1-203ENST00000394536 PHF24Q9UPV7 400 aa15.99■□□□□ 0.15
PCDH1-203ENST00000394536 ATP11BQ9Y2G3 1177 aa15.99■□□□□ 0.15
PCDH1-203ENST00000394536 ZNF7P17097 686 aaPredicted RBP15.98■□□□□ 0.15
PCDH1-203ENST00000394536 MSH3P20585 1137 aa15.98■□□□□ 0.15
PCDH1-203ENST00000394536 SLC6A2P23975 617 aa15.98■□□□□ 0.15
PCDH1-203ENST00000394536 KCNQ1P51787 676 aa15.98■□□□□ 0.15
PCDH1-203ENST00000394536 NANOGP8Q6NSW7 305 aa15.98■□□□□ 0.15
PCDH1-203ENST00000394536 MSANTD2Q6P1R3 559 aa15.98■□□□□ 0.15
PCDH1-203ENST00000394536 GAB3Q8WWW8 586 aa15.98■□□□□ 0.15
PCDH1-203ENST00000394536 NT5C3BQ969T7 300 aa15.98■□□□□ 0.15
PCDH1-203ENST00000394536 SMIM14Q96QK8 99 aa15.98■□□□□ 0.15
PCDH1-203ENST00000394536 RANBP9Q96S59 729 aa15.98■□□□□ 0.15
PCDH1-203ENST00000394536 NANOGQ9H9S0 305 aa15.98■□□□□ 0.15
PCDH1-203ENST00000394536 SLAMF8Q9P0V8 285 aa15.98■□□□□ 0.15
PCDH1-203ENST00000394536 C3orf18Q9UK00 162 aa15.98■□□□□ 0.15
PCDH1-203ENST00000394536 SH3GLB1Q9Y371 365 aa15.98■□□□□ 0.15
PCDH1-203ENST00000394536 MAGED1Q9Y5V3 778 aaPredicted RBP15.98■□□□□ 0.15
PCDH1-203ENST00000394536 A0A0D9SEW6 157 aa15.98■□□□□ 0.15
PCDH1-203ENST00000394536 GABRDO14764 452 aa15.98■□□□□ 0.15
PCDH1-203ENST00000394536 OR1I1O60431 355 aa15.98■□□□□ 0.15
PCDH1-203ENST00000394536 DLGAP3O95886 979 aa15.98■□□□□ 0.15
PCDH1-203ENST00000394536 ABCB1P08183 1280 aaPredicted RBP15.98■□□□□ 0.15
PCDH1-203ENST00000394536 CD1DP15813 335 aa15.98■□□□□ 0.15
PCDH1-203ENST00000394536 EFNA1P20827 205 aaPredicted RBP15.98■□□□□ 0.15
PCDH1-203ENST00000394536 CDH3P22223 829 aa15.98■□□□□ 0.15
PCDH1-203ENST00000394536 SERPINB1P30740 379 aa15.98■□□□□ 0.15
PCDH1-203ENST00000394536 ACADVLP49748 655 aa15.98■□□□□ 0.15
PCDH1-203ENST00000394536 LRRC74AQ0VAA2 488 aa15.98■□□□□ 0.15
PCDH1-203ENST00000394536 PMS2P3Q13401 168 aa15.98■□□□□ 0.15
PCDH1-203ENST00000394536 RAB39AQ14964 217 aa15.98■□□□□ 0.15
PCDH1-203ENST00000394536 ADHFE1Q8IWW8 467 aa15.98■□□□□ 0.15
PCDH1-203ENST00000394536 SELENOMQ8WWX9 145 aa15.98■□□□□ 0.15
PCDH1-203ENST00000394536 HIPK3Q9H422 1215 aa15.98■□□□□ 0.15
PCDH1-203ENST00000394536 PRDM5Q9NQX1 630 aaPredicted RBP15.98■□□□□ 0.15
PCDH1-203ENST00000394536 RGS14O43566 566 aa15.98■□□□□ 0.15
PCDH1-203ENST00000394536 NADKO95544 446 aaPredicted RBP15.98■□□□□ 0.15
PCDH1-203ENST00000394536 ITGALP20701 1170 aa15.98■□□□□ 0.15
PCDH1-203ENST00000394536 FAM110CQ1W6H9 321 aa15.98■□□□□ 0.15
PCDH1-203ENST00000394536 CHERPQ8IWX8 916 aaKnown RBP15.98■□□□□ 0.15
PCDH1-203ENST00000394536 PNPT1Q8TCS8 783 aaKnown RBP15.98■□□□□ 0.15
PCDH1-203ENST00000394536 COX4I2Q96KJ9 171 aa15.98■□□□□ 0.15
PCDH1-203ENST00000394536 C6orf62Q9GZU0 229 aaPredicted RBP15.98■□□□□ 0.15
PCDH1-203ENST00000394536 ARL15Q9NXU5 204 aa15.98■□□□□ 0.15
PCDH1-203ENST00000394536 MAGEL2Q9UJ55 1249 aa15.98■□□□□ 0.15
PCDH1-203ENST00000394536 USP22Q9UPT9 525 aa15.98■□□□□ 0.15
PCDH1-203ENST00000394536 COQ6Q9Y2Z9 468 aa15.98■□□□□ 0.15
PCDH1-203ENST00000394536 RAI2Q9Y5P3 530 aa15.98■□□□□ 0.15
PCDH1-203ENST00000394536 FAM20BO75063 409 aa15.97■□□□□ 0.15
PCDH1-203ENST00000394536 CBFA2T3O75081 653 aa15.97■□□□□ 0.15
PCDH1-203ENST00000394536 G6PDP11413 515 aa15.97■□□□□ 0.15
PCDH1-203ENST00000394536 ARNTP27540 789 aa15.97■□□□□ 0.15
PCDH1-203ENST00000394536 ATP5C1P36542 298 aaKnown RBP15.97■□□□□ 0.15
PCDH1-203ENST00000394536 CBX3Q13185 183 aa15.97■□□□□ 0.15
PCDH1-203ENST00000394536 BOP1Q14137 746 aaKnown RBP15.97■□□□□ 0.15
PCDH1-203ENST00000394536 MS4A13Q5J8X5 152 aa15.97■□□□□ 0.15
PCDH1-203ENST00000394536 DENND5AQ6IQ26 1287 aa15.97■□□□□ 0.15
PCDH1-203ENST00000394536 IGSF8Q969P0 613 aa15.97■□□□□ 0.15
PCDH1-203ENST00000394536 IMP4Q96G21 291 aaKnown RBP15.97■□□□□ 0.15
PCDH1-203ENST00000394536 MAGED4Q96JG8 741 aa15.97■□□□□ 0.15
PCDH1-203ENST00000394536 OLAHQ9NV23 265 aa15.97■□□□□ 0.15
PCDH1-203ENST00000394536 RBMX2Q9Y388 322 aaKnown RBP15.97■□□□□ 0.15
PCDH1-203ENST00000394536 FOCADQ5VW36 1801 aa15.97■□□□□ 0.15
PCDH1-203ENST00000394536 ALDH2P05091 517 aa15.97■□□□□ 0.15
PCDH1-203ENST00000394536 MAGEA12P43365 314 aa15.97■□□□□ 0.15
PCDH1-203ENST00000394536 OR4D2P58180 307 aa15.97■□□□□ 0.15
PCDH1-203ENST00000394536 PAGE3Q5JUK9 113 aa15.97■□□□□ 0.15
PCDH1-203ENST00000394536 PIK3R6Q5UE93 754 aa15.97■□□□□ 0.15
PCDH1-203ENST00000394536 RNF219Q5W0B1 726 aaPredicted RBP15.97■□□□□ 0.15
PCDH1-203ENST00000394536 ZC3H7AQ8IWR0 971 aaKnown RBP15.97■□□□□ 0.15
PCDH1-203ENST00000394536 CLDN19Q8N6F1 224 aa15.97■□□□□ 0.15
PCDH1-203ENST00000394536 LRRC3Q9BY71 257 aa15.97■□□□□ 0.15
PCDH1-203ENST00000394536 SMOC2Q9H3U7 446 aa15.97■□□□□ 0.15
PCDH1-203ENST00000394536 EVLQ9UI08 416 aaPredicted RBP15.97■□□□□ 0.15
PCDH1-203ENST00000394536 ANKRD31Q8N7Z5 1873 aa15.97■□□□□ 0.15
PCDH1-203ENST00000394536 UBFD1O14562 309 aaKnown RBP15.97■□□□□ 0.15
PCDH1-203ENST00000394536 C1RP00736 705 aa15.97■□□□□ 0.15
PCDH1-203ENST00000394536 POU1F1P28069 291 aa15.97■□□□□ 0.15
PCDH1-203ENST00000394536 TUBA4AP68366 448 aa15.97■□□□□ 0.15
PCDH1-203ENST00000394536 MEP1AQ16819 746 aa15.97■□□□□ 0.15
PCDH1-203ENST00000394536 ALKAL1Q6UXT8 129 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms