RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 ABCD2Q9UBJ2 740 aa11.06□□□□□ -0.64
CUX1-204ENST00000393824 ZNF639Q9UID6 485 aa11.06□□□□□ -0.64
CUX1-204ENST00000393824 ZCWPW2A0A1B0GU75 182 aa11.05□□□□□ -0.64
CUX1-204ENST00000393824 AP3B1O00203 1094 aa11.05□□□□□ -0.64
CUX1-204ENST00000393824 UBDO15205 165 aa11.05□□□□□ -0.64
CUX1-204ENST00000393824 SLC22A1O15245 554 aa11.05□□□□□ -0.64
CUX1-204ENST00000393824 DLX3O60479 287 aa11.05□□□□□ -0.64
CUX1-204ENST00000393824 SYNCRIPO60506 623 aaKnown RBP11.05□□□□□ -0.64
CUX1-204ENST00000393824 CNPP09543 421 aaKnown RBP11.05□□□□□ -0.64
CUX1-204ENST00000393824 HSD17B1P14061 328 aa11.05□□□□□ -0.64
CUX1-204ENST00000393824 CTNNB1P35222 781 aa11.05□□□□□ -0.64
CUX1-204ENST00000393824 CDC20Q12834 499 aa11.05□□□□□ -0.64
CUX1-204ENST00000393824 BNIP2Q12982 314 aa11.05□□□□□ -0.64
CUX1-204ENST00000393824 SMAD1Q15797 465 aaKnown RBP11.05□□□□□ -0.64
CUX1-204ENST00000393824 LDLRAP1Q5SW96 308 aa11.05□□□□□ -0.64
CUX1-204ENST00000393824 KIAA0408Q6ZU52 694 aa11.05□□□□□ -0.64
CUX1-204ENST00000393824 LINC00523Q86TU6 105 aa11.05□□□□□ -0.64
CUX1-204ENST00000393824 ADGRG5Q8IZF4 528 aa11.05□□□□□ -0.64
CUX1-204ENST00000393824 PHOSPHO2Q8TCD6 241 aa11.05□□□□□ -0.64
CUX1-204ENST00000393824 KCTD13Q8WZ19 329 aa11.05□□□□□ -0.64
CUX1-204ENST00000393824 EDEM1Q92611 657 aa11.05□□□□□ -0.64
CUX1-204ENST00000393824 HDAC10Q969S8 669 aa11.05□□□□□ -0.64
CUX1-204ENST00000393824 TXNDC15Q96J42 360 aa11.05□□□□□ -0.64
CUX1-204ENST00000393824 VPS39Q96JC1 886 aa11.05□□□□□ -0.64
CUX1-204ENST00000393824 FAR2Q96K12 515 aa11.05□□□□□ -0.64
CUX1-204ENST00000393824 GDF15Q99988 308 aa11.05□□□□□ -0.64
CUX1-204ENST00000393824 ZBP1Q9H171 429 aa11.05□□□□□ -0.64
CUX1-204ENST00000393824 ACTR3BQ9P1U1 418 aa11.05□□□□□ -0.64
CUX1-204ENST00000393824 TLK1Q9UKI8 766 aa11.05□□□□□ -0.64
CUX1-204ENST00000393824 NUDT5Q9UKK9 219 aa11.05□□□□□ -0.64
CUX1-204ENST00000393824 MTF2Q9Y483 593 aaPredicted RBP11.05□□□□□ -0.64
CUX1-204ENST00000393824 CCDC78A2IDD5 438 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 OR6C75A6NL08 312 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 TMEM233B4DJY2 109 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 GRM6O15303 877 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 NUAK1O60285 661 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 DNAJB5O75953 348 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 GPIP06744 558 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 BMPR1AP36894 532 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 NPY2RP49146 381 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 DAOAP59103 153 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 PLCL1Q15111 1095 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 ANO4Q32M45 955 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 PGS1Q32NB8 556 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 BSPRYQ5W0U4 402 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 CRTC3Q6UUV7 619 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 SLC16A12Q6ZSM3 486 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 PIWIL4Q7Z3Z4 852 aaKnown RBP11.04□□□□□ -0.64
CUX1-204ENST00000393824 FSTL5Q8N475 847 aaPredicted RBP11.04□□□□□ -0.64
CUX1-204ENST00000393824 PIK3C3Q8NEB9 887 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 ACVR1CQ8NER5 493 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 LILRB4Q8NHJ6 448 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 GIPC2Q8TF65 315 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 FAM149B1Q96BN6 582 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 CEP295NLQ96MC4 621 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 GPR22Q99680 433 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 HOPXQ9BPY8 73 aaPredicted RBP11.04□□□□□ -0.64
CUX1-204ENST00000393824 PBX4Q9BYU1 374 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 MEAF6Q9HAF1 191 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 NMUR1Q9HB89 426 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 CPNE5Q9HCH3 593 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 CASS4Q9NQ75 786 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 FBXO8Q9NRD0 319 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 TMPRSS4Q9NRS4 437 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 GBF1Q92538 1859 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 TTC34A8MYJ7 566 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 CENPBD1B2RD01 187 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 I6L893 689 aaPredicted RBP11.04□□□□□ -0.64
CUX1-204ENST00000393824 NRG2O14511 850 aaPredicted RBP11.04□□□□□ -0.64
CUX1-204ENST00000393824 KRT75O95678 551 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 SNAP29O95721 258 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 AP2A1O95782 977 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 CHEK2O96017 543 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 EEF1B2P24534 225 aaKnown RBP11.04□□□□□ -0.64
CUX1-204ENST00000393824 PSMB4P28070 264 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 ACADSBP45954 432 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 DNASE1L3Q13609 305 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 PAFAH1B3Q15102 231 aaKnown RBP11.04□□□□□ -0.64
CUX1-204ENST00000393824 RBM48Q5RL73 367 aaKnown RBP11.04□□□□□ -0.64
CUX1-204ENST00000393824 SLX4IPQ5VYV7 408 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 PPP2R2DQ66LE6 453 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 UGT3A1Q6NUS8 523 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 SPPL2CQ8IUH8 684 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 DCP1BQ8IZD4 617 aaKnown RBP11.04□□□□□ -0.64
CUX1-204ENST00000393824 MFSD4AQ8N468 514 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 PAPD5Q8NDF8 572 aaKnown RBP11.04□□□□□ -0.64
CUX1-204ENST00000393824 ZNF669Q96BR6 464 aaPredicted RBP11.04□□□□□ -0.64
CUX1-204ENST00000393824 MFSD3Q96ES6 412 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 LGMNQ99538 433 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 SLC39A3Q9BRY0 314 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 FUNDC2Q9BWH2 189 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 INTS10Q9NVR2 710 aaKnown RBP11.04□□□□□ -0.64
CUX1-204ENST00000393824 GMPR2Q9P2T1 348 aaKnown RBP11.04□□□□□ -0.64
CUX1-204ENST00000393824 ENPP5Q9UJA9 477 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 FZD10Q9ULW2 581 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 RUVBL2Q9Y230 463 aaKnown RBP11.04□□□□□ -0.64
CUX1-204ENST00000393824 TMA7Q9Y2S6 64 aaKnown RBP11.04□□□□□ -0.64
CUX1-204ENST00000393824 PCDHB5Q9Y5E4 795 aa11.04□□□□□ -0.64
CUX1-204ENST00000393824 EPOPA6NHQ4 379 aa11.03□□□□□ -0.64
CUX1-204ENST00000393824 NME4O00746 187 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms