RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 TLR8Q9NR97 1041 aaKnown RBP18.66■□□□□ 0.58
CBX1-202ENST00000393408 SUN2Q9UH99 717 aa18.66■□□□□ 0.58
CBX1-202ENST00000393408 ZNHIT2Q9UHR6 403 aa18.66■□□□□ 0.58
CBX1-202ENST00000393408 VWA8A3KMH1 1905 aa18.66■□□□□ 0.58
CBX1-202ENST00000393408 ANKRD12Q6UB98 2062 aa18.66■□□□□ 0.58
CBX1-202ENST00000393408 TMEM189-UBE2V1I3L0A0 370 aa18.66■□□□□ 0.58
CBX1-202ENST00000393408 SNAP29O95721 258 aa18.66■□□□□ 0.58
CBX1-202ENST00000393408 MT-ND1P03886 318 aa18.66■□□□□ 0.58
CBX1-202ENST00000393408 RGRP47804 291 aa18.66■□□□□ 0.58
CBX1-202ENST00000393408 C6orf136Q5SQH8 315 aa18.66■□□□□ 0.58
CBX1-202ENST00000393408 VARS2Q5ST30 1063 aaKnown RBP18.66■□□□□ 0.58
CBX1-202ENST00000393408 C17orf99Q6UX52 265 aa18.66■□□□□ 0.58
CBX1-202ENST00000393408 GPRIN3Q6ZVF9 776 aa18.66■□□□□ 0.58
CBX1-202ENST00000393408 GLT6D1Q7Z4J2 308 aa18.66■□□□□ 0.58
CBX1-202ENST00000393408 PROSER1Q86XN7 944 aa18.66■□□□□ 0.58
CBX1-202ENST00000393408 CFAP52Q8N1V2 620 aa18.66■□□□□ 0.58
CBX1-202ENST00000393408 LRRC43Q8N309 656 aa18.66■□□□□ 0.58
CBX1-202ENST00000393408 ZNF420Q8TAQ5 688 aaPredicted RBP18.66■□□□□ 0.58
CBX1-202ENST00000393408 PROKR1Q8TCW9 393 aa18.66■□□□□ 0.58
CBX1-202ENST00000393408 DOK1Q99704 481 aa18.66■□□□□ 0.58
CBX1-202ENST00000393408 SOX17Q9H6I2 414 aaPredicted RBP18.66■□□□□ 0.58
CBX1-202ENST00000393408 PLGRKTQ9HBL7 147 aa18.66■□□□□ 0.58
CBX1-202ENST00000393408 PFDN4Q9NQP4 134 aa18.66■□□□□ 0.58
CBX1-202ENST00000393408 RIC8BQ9NVN3 520 aa18.66■□□□□ 0.58
CBX1-202ENST00000393408 TMEM45AQ9NWC5 275 aa18.66■□□□□ 0.58
CBX1-202ENST00000393408 ASB1Q9Y576 335 aa18.66■□□□□ 0.58
CBX1-202ENST00000393408 FRMPD3Q5JV73 1810 aa18.66■□□□□ 0.58
CBX1-202ENST00000393408 NPPAP01160 153 aa18.65■□□□□ 0.58
CBX1-202ENST00000393408 DCKP27707 260 aa18.65■□□□□ 0.58
CBX1-202ENST00000393408 TTKP33981 857 aa18.65■□□□□ 0.58
CBX1-202ENST00000393408 ENTPD1P49961 510 aa18.65■□□□□ 0.58
CBX1-202ENST00000393408 OR4D2P58180 307 aa18.65■□□□□ 0.58
CBX1-202ENST00000393408 RAB39AQ14964 217 aa18.65■□□□□ 0.58
CBX1-202ENST00000393408 PYCR3Q53H96 274 aa18.65■□□□□ 0.58
CBX1-202ENST00000393408 GLB1LQ6UWU2 654 aa18.65■□□□□ 0.58
CBX1-202ENST00000393408 ZFAND4Q86XD8 727 aa18.65■□□□□ 0.58
CBX1-202ENST00000393408 CROCCP3Q8IVE0 287 aa18.65■□□□□ 0.58
CBX1-202ENST00000393408 BBS5Q8N3I7 341 aa18.65■□□□□ 0.58
CBX1-202ENST00000393408 BPIFB1Q8TDL5 484 aa18.65■□□□□ 0.58
CBX1-202ENST00000393408 ESAMQ96AP7 390 aa18.65■□□□□ 0.58
CBX1-202ENST00000393408 SEPHS2Q99611 448 aa18.65■□□□□ 0.58
CBX1-202ENST00000393408 SEPT3Q9UH03 358 aa18.65■□□□□ 0.58
CBX1-202ENST00000393408 CENPFP49454 3210 aa18.65■□□□□ 0.58
CBX1-202ENST00000393408 E2F3O00716 465 aa18.65■□□□□ 0.58
CBX1-202ENST00000393408 VPS26AO75436 327 aa18.65■□□□□ 0.58
CBX1-202ENST00000393408 OR4F21O95013 312 aa18.65■□□□□ 0.58
CBX1-202ENST00000393408 ATE1O95260 518 aa18.65■□□□□ 0.58
CBX1-202ENST00000393408 CELF2O95319 508 aaKnown RBP18.65■□□□□ 0.58
CBX1-202ENST00000393408 PKMP14618 531 aaKnown RBP18.65■□□□□ 0.58
CBX1-202ENST00000393408 TBPL2Q6SJ96 375 aa18.65■□□□□ 0.58
CBX1-202ENST00000393408 LGI2Q8N0V4 545 aa18.65■□□□□ 0.58
CBX1-202ENST00000393408 DPP10Q8N608 796 aa18.65■□□□□ 0.58
CBX1-202ENST00000393408 SIDT2Q8NBJ9 832 aaKnown RBP18.65■□□□□ 0.58
CBX1-202ENST00000393408 OR7D4Q8NG98 312 aa18.65■□□□□ 0.58
CBX1-202ENST00000393408 FNDC8Q8TC99 324 aa18.65■□□□□ 0.58
CBX1-202ENST00000393408 RMDN1Q96DB5 314 aa18.65■□□□□ 0.58
CBX1-202ENST00000393408 VPS50Q96JG6 964 aa18.65■□□□□ 0.58
CBX1-202ENST00000393408 SMIM14Q96QK8 99 aa18.65■□□□□ 0.58
CBX1-202ENST00000393408 PSKH2Q96QS6 385 aa18.65■□□□□ 0.58
CBX1-202ENST00000393408 DCUN1D5Q9BTE7 237 aa18.65■□□□□ 0.58
CBX1-202ENST00000393408 ZBED2Q9BTP6 218 aa18.65■□□□□ 0.58
CBX1-202ENST00000393408 CHID1Q9BWS9 393 aa18.65■□□□□ 0.58
CBX1-202ENST00000393408 LRRC3Q9BY71 257 aa18.65■□□□□ 0.58
CBX1-202ENST00000393408 YTHDF1Q9BYJ9 559 aaKnown RBP18.65■□□□□ 0.58
CBX1-202ENST00000393408 POLR1BQ9H9Y6 1135 aa18.65■□□□□ 0.58
CBX1-202ENST00000393408 IRAK4Q9NWZ3 460 aa18.65■□□□□ 0.58
CBX1-202ENST00000393408 EIF2B4Q9UI10 523 aaKnown RBP18.65■□□□□ 0.58
CBX1-202ENST00000393408 FAF1Q9UNN5 650 aaPredicted RBP18.65■□□□□ 0.58
CBX1-202ENST00000393408 PRG3Q9Y2Y8 225 aaPredicted RBP18.65■□□□□ 0.58
CBX1-202ENST00000393408 H3BMQ9 156 aa18.64■□□□□ 0.58
CBX1-202ENST00000393408 SYNCRIPO60506 623 aaKnown RBP18.64■□□□□ 0.58
CBX1-202ENST00000393408 NIPSNAP2O75323 286 aa18.64■□□□□ 0.58
CBX1-202ENST00000393408 CYBAP13498 195 aa18.64■□□□□ 0.58
CBX1-202ENST00000393408 OR1G1P47890 313 aa18.64■□□□□ 0.58
CBX1-202ENST00000393408 GNA12Q03113 381 aa18.64■□□□□ 0.58
CBX1-202ENST00000393408 SLC2A7Q6PXP3 512 aa18.64■□□□□ 0.58
CBX1-202ENST00000393408 HID1Q8IV36 788 aa18.64■□□□□ 0.58
CBX1-202ENST00000393408 RIMKLAQ8IXN7 391 aa18.64■□□□□ 0.58
CBX1-202ENST00000393408 PIANPQ8IYJ0 282 aa18.64■□□□□ 0.58
CBX1-202ENST00000393408 FNDC5Q8NAU1 212 aa18.64■□□□□ 0.58
CBX1-202ENST00000393408 HSPBAP1Q96EW2 488 aa18.64■□□□□ 0.58
CBX1-202ENST00000393408 COG8Q96MW5 612 aa18.64■□□□□ 0.58
CBX1-202ENST00000393408 ZNF382Q96SR6 550 aa18.64■□□□□ 0.58
CBX1-202ENST00000393408 PIF1Q9H611 641 aa18.64■□□□□ 0.58
CBX1-202ENST00000393408 V9GYQ6 96 aa18.64■□□□□ 0.58
CBX1-202ENST00000393408 GRXCR2A6NFK2 248 aa18.64■□□□□ 0.57
CBX1-202ENST00000393408 F5H5T6 163 aa18.64■□□□□ 0.57
CBX1-202ENST00000393408 GIPC1O14908 333 aa18.64■□□□□ 0.57
CBX1-202ENST00000393408 PRLP01236 227 aa18.64■□□□□ 0.57
CBX1-202ENST00000393408 TMED1Q13445 227 aa18.64■□□□□ 0.57
CBX1-202ENST00000393408 C5orf22Q49AR2 442 aa18.64■□□□□ 0.57
CBX1-202ENST00000393408 CLLU1OSQ5K130 101 aa18.64■□□□□ 0.57
CBX1-202ENST00000393408 CTSL3PQ5NE16 218 aa18.64■□□□□ 0.57
CBX1-202ENST00000393408 PSAPL1Q6NUJ1 521 aa18.64■□□□□ 0.57
CBX1-202ENST00000393408 Q6ZSR9 355 aa18.64■□□□□ 0.57
CBX1-202ENST00000393408 GPSM1Q86YR5 675 aa18.64■□□□□ 0.57
CBX1-202ENST00000393408 CDYL2Q8N8U2 506 aa18.64■□□□□ 0.57
CBX1-202ENST00000393408 EEF1AKMT1Q8WVE0 214 aa18.64■□□□□ 0.57
CBX1-202ENST00000393408 LINGO1Q96FE5 620 aa18.64■□□□□ 0.57
CBX1-202ENST00000393408 MAGEH1Q9H213 219 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms