RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 SPRED1Q7Z699 444 aa16.23■□□□□ 0.19
PHTF1-205ENST00000393357 CIR1Q86X95 450 aaPredicted RBP16.23■□□□□ 0.19
PHTF1-205ENST00000393357 ZNF540Q8NDQ6 660 aa16.23■□□□□ 0.19
PHTF1-205ENST00000393357 CHDHQ8NE62 594 aaPredicted RBP16.23■□□□□ 0.19
PHTF1-205ENST00000393357 CDC26Q8NHZ8 85 aa16.23■□□□□ 0.19
PHTF1-205ENST00000393357 VRTNQ9H8Y1 702 aa16.23■□□□□ 0.19
PHTF1-205ENST00000393357 WDR6Q9NNW5 1121 aaKnown RBP16.23■□□□□ 0.19
PHTF1-205ENST00000393357 VTA1Q9NP79 307 aa16.23■□□□□ 0.19
PHTF1-205ENST00000393357 TLR9Q9NR96 1032 aa16.23■□□□□ 0.19
PHTF1-205ENST00000393357 INTS10Q9NVR2 710 aaKnown RBP16.23■□□□□ 0.19
PHTF1-205ENST00000393357 FAM118AQ9NWS6 357 aa16.23■□□□□ 0.19
PHTF1-205ENST00000393357 AAR2Q9Y312 384 aaKnown RBP16.23■□□□□ 0.19
PHTF1-205ENST00000393357 RGPD3A6NKT7 1758 aaPredicted RBP16.22■□□□□ 0.19
PHTF1-205ENST00000393357 RGPD4Q7Z3J3 1758 aa16.22■□□□□ 0.19
PHTF1-205ENST00000393357 ASPDHA6ND91 283 aa16.22■□□□□ 0.19
PHTF1-205ENST00000393357 MOXD2PA6NHM9 499 aa16.22■□□□□ 0.19
PHTF1-205ENST00000393357 DFNA5O60443 496 aa16.22■□□□□ 0.19
PHTF1-205ENST00000393357 USP2O75604 605 aaPredicted RBP16.22■□□□□ 0.19
PHTF1-205ENST00000393357 B3GALT4O96024 378 aa16.22■□□□□ 0.19
PHTF1-205ENST00000393357 LCKP06239 509 aa16.22■□□□□ 0.19
PHTF1-205ENST00000393357 CNPP09543 421 aaKnown RBP16.22■□□□□ 0.19
PHTF1-205ENST00000393357 IDO1P14902 403 aa16.22■□□□□ 0.19
PHTF1-205ENST00000393357 POLR2JP52435 117 aaKnown RBP16.22■□□□□ 0.19
PHTF1-205ENST00000393357 ADARB1P78563 741 aaKnown RBP16.22■□□□□ 0.19
PHTF1-205ENST00000393357 BNIP2Q12982 314 aa16.22■□□□□ 0.19
PHTF1-205ENST00000393357 KCTD2Q14681 263 aa16.22■□□□□ 0.19
PHTF1-205ENST00000393357 SULT1C3Q6IMI6 304 aa16.22■□□□□ 0.19
PHTF1-205ENST00000393357 DENND5AQ6IQ26 1287 aa16.22■□□□□ 0.19
PHTF1-205ENST00000393357 AHSA2Q719I0 299 aa16.22■□□□□ 0.19
PHTF1-205ENST00000393357 DUSP16Q9BY84 665 aa16.22■□□□□ 0.19
PHTF1-205ENST00000393357 GPSM3Q9Y4H4 160 aa16.22■□□□□ 0.19
PHTF1-205ENST00000393357 ACTL7AQ9Y615 435 aa16.22■□□□□ 0.19
PHTF1-205ENST00000393357 USP34Q70CQ2 3546 aa16.22■□□□□ 0.19
PHTF1-205ENST00000393357 J3KR12 359 aa16.22■□□□□ 0.19
PHTF1-205ENST00000393357 BTN3A1O00481 513 aa16.22■□□□□ 0.19
PHTF1-205ENST00000393357 ASNA1O43681 348 aa16.22■□□□□ 0.19
PHTF1-205ENST00000393357 LGALS2P05162 132 aa16.22■□□□□ 0.19
PHTF1-205ENST00000393357 IL12AP29459 219 aa16.22■□□□□ 0.19
PHTF1-205ENST00000393357 ICAM3P32942 547 aa16.22■□□□□ 0.19
PHTF1-205ENST00000393357 ACADVLP49748 655 aa16.22■□□□□ 0.19
PHTF1-205ENST00000393357 RAPSNQ13702 412 aa16.22■□□□□ 0.19
PHTF1-205ENST00000393357 KIAA0319Q5VV43 1072 aa16.22■□□□□ 0.19
PHTF1-205ENST00000393357 SLC16A12Q6ZSM3 486 aa16.22■□□□□ 0.19
PHTF1-205ENST00000393357 TAC4Q86UU9 113 aa16.22■□□□□ 0.19
PHTF1-205ENST00000393357 FBXO39Q8N4B4 442 aa16.22■□□□□ 0.19
PHTF1-205ENST00000393357 PAF1Q8N7H5 531 aa16.22■□□□□ 0.19
PHTF1-205ENST00000393357 MCFD2Q8NI22 146 aa16.22■□□□□ 0.19
PHTF1-205ENST00000393357 ZUFSPQ96AP4 578 aa16.22■□□□□ 0.19
PHTF1-205ENST00000393357 HSFY1Q96LI6 401 aa16.22■□□□□ 0.19
PHTF1-205ENST00000393357 BARD1Q99728 777 aaKnown RBP16.22■□□□□ 0.19
PHTF1-205ENST00000393357 SLX1AQ9BQ83 275 aa16.22■□□□□ 0.19
PHTF1-205ENST00000393357 MROQ9BYG7 248 aa16.22■□□□□ 0.19
PHTF1-205ENST00000393357 NACA2Q9H009 215 aa16.22■□□□□ 0.19
PHTF1-205ENST00000393357 ZBTB20Q9HC78 741 aaPredicted RBP16.22■□□□□ 0.19
PHTF1-205ENST00000393357 NSMCE4AQ9NXX6 385 aa16.22■□□□□ 0.19
PHTF1-205ENST00000393357 IL37Q9NZH6 218 aa16.22■□□□□ 0.19
PHTF1-205ENST00000393357 TRHDEQ9UKU6 1024 aa16.22■□□□□ 0.19
PHTF1-205ENST00000393357 ASB1Q9Y576 335 aa16.22■□□□□ 0.19
PHTF1-205ENST00000393357 SMIM28A0A1B0GU29 152 aa16.21■□□□□ 0.19
PHTF1-205ENST00000393357 NPEPPSL1A6NEC2 478 aa16.21■□□□□ 0.19
PHTF1-205ENST00000393357 DAB1O75553 588 aa16.21■□□□□ 0.19
PHTF1-205ENST00000393357 RHOBTB1O94844 696 aa16.21■□□□□ 0.19
PHTF1-205ENST00000393357 ANGPTL1O95841 491 aa16.21■□□□□ 0.19
PHTF1-205ENST00000393357 GPIP06744 558 aa16.21■□□□□ 0.19
PHTF1-205ENST00000393357 ADCYAP1R1P41586 468 aa16.21■□□□□ 0.19
PHTF1-205ENST00000393357 PTGR1Q14914 329 aa16.21■□□□□ 0.19
PHTF1-205ENST00000393357 NR6A1Q15406 480 aa16.21■□□□□ 0.19
PHTF1-205ENST00000393357 NKG7Q16617 165 aa16.21■□□□□ 0.19
PHTF1-205ENST00000393357 FAM98BQ52LJ0 330 aaKnown RBP16.21■□□□□ 0.19
PHTF1-205ENST00000393357 DEPDC1Q5TB30 811 aa16.21■□□□□ 0.19
PHTF1-205ENST00000393357 PLEKHG7Q6ZR37 379 aa16.21■□□□□ 0.19
PHTF1-205ENST00000393357 ARMCX2Q7L311 632 aa16.21■□□□□ 0.19
PHTF1-205ENST00000393357 C2CD4AQ8NCU7 369 aaPredicted RBP16.21■□□□□ 0.19
PHTF1-205ENST00000393357 CLIP3Q96DZ5 547 aa16.21■□□□□ 0.19
PHTF1-205ENST00000393357 TNIP3Q96KP6 325 aa16.21■□□□□ 0.19
PHTF1-205ENST00000393357 IGKV6-21A0A0C4DH24 114 aa16.21■□□□□ 0.19
PHTF1-205ENST00000393357 UPK3BL1B0FP48 263 aa16.21■□□□□ 0.19
PHTF1-205ENST00000393357 UPK3BL2E5RIL1 263 aa16.21■□□□□ 0.19
PHTF1-205ENST00000393357 FCGR1AP12314 374 aa16.21■□□□□ 0.19
PHTF1-205ENST00000393357 PFKLP17858 780 aa16.21■□□□□ 0.19
PHTF1-205ENST00000393357 AZGP1P25311 298 aaKnown RBP16.21■□□□□ 0.19
PHTF1-205ENST00000393357 EPHA2P29317 976 aa16.21■□□□□ 0.19
PHTF1-205ENST00000393357 PAQR3Q6TCH7 311 aa16.21■□□□□ 0.19
PHTF1-205ENST00000393357 TMEM179BQ7Z7N9 219 aa16.21■□□□□ 0.19
PHTF1-205ENST00000393357 CELF2-AS1Q8N7Q2 184 aa16.21■□□□□ 0.19
PHTF1-205ENST00000393357 DOK1Q99704 481 aa16.21■□□□□ 0.19
PHTF1-205ENST00000393357 HGH1Q9BTY7 390 aa16.21■□□□□ 0.19
PHTF1-205ENST00000393357 TRIT1Q9H3H1 467 aaKnown RBP16.21■□□□□ 0.19
PHTF1-205ENST00000393357 TXNRD2Q9NNW7 524 aa16.21■□□□□ 0.19
PHTF1-205ENST00000393357 SCHIP1Q9P0W5 487 aaPredicted RBP16.21■□□□□ 0.19
PHTF1-205ENST00000393357 DNMT3BQ9UBC3 853 aaKnown RBP16.21■□□□□ 0.19
PHTF1-205ENST00000393357 TMEM98Q9Y2Y6 226 aa16.21■□□□□ 0.19
PHTF1-205ENST00000393357 PCDHA9Q9Y5H5 950 aa16.21■□□□□ 0.19
PHTF1-205ENST00000393357 NRXN2Q9P2S2 1712 aa16.21■□□□□ 0.18
PHTF1-205ENST00000393357 CASTOR2A6NHX0 329 aa16.21■□□□□ 0.18
PHTF1-205ENST00000393357 ZNF701M0R085 212 aaPredicted RBP16.21■□□□□ 0.18
PHTF1-205ENST00000393357 ALDH3A2P51648 485 aa16.21■□□□□ 0.18
PHTF1-205ENST00000393357 HERVK_113P63132 956 aa16.21■□□□□ 0.18
PHTF1-205ENST00000393357 NPTX1Q15818 432 aa16.21■□□□□ 0.18
PHTF1-205ENST00000393357 BLOC1S3Q6QNY0 202 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms