RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 FAM96AQ9H5X1 160 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 EBF2Q9HAK2 575 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 PREBQ9HCU5 417 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 TLK1Q9UKI8 766 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 CRYL1Q9Y2S2 319 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 PIKFYVEQ9Y2I7 2098 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 GON4LQ3T8J9 2241 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 CEP192Q8TEP8 1941 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 UBA6A0AVT1 1052 aaPredicted RBP13.45□□□□□ -0.26
PTN-202ENST00000393083 WDR91A4D1P6 747 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 TCP11X1B4DZS4 312 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 LATO43561 262 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 NDUFS3O75489 264 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 FSBPO95073 299 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 PRAMEF1O95521 474 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 GSTA1P08263 222 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 VIMP08670 466 aaKnown RBP13.45□□□□□ -0.26
PTN-202ENST00000393083 C1SP09871 688 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 SLC35E2BP0CK96 405 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 BPIP17213 487 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 MAOBP27338 520 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 CRABP2P29373 138 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 VIPR1P32241 457 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 SPAM1P38567 509 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 MPLP40238 635 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 CDKN1CP49918 316 aaPredicted RBP13.45□□□□□ -0.26
PTN-202ENST00000393083 PGGT1BP53609 377 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 CACNG1Q06432 222 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 ARHGEF7Q14155 803 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 ZNF460Q14592 562 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 PDK4Q16654 411 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 WDR45BQ5MNZ6 344 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 RNF187Q5TA31 235 aaPredicted RBP13.45□□□□□ -0.26
PTN-202ENST00000393083 C16orf46Q6P387 395 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 KYAT3Q6YP21 454 aaKnown RBP13.45□□□□□ -0.26
PTN-202ENST00000393083 CLEC14AQ86T13 490 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 TRIM69Q86WT6 500 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 SYT12Q8IV01 421 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 CEP97Q8IW35 865 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 LRRC34Q8IZ02 419 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 CCDC63Q8NA47 563 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 BCAS4Q8TDM0 211 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 PIGKQ92643 395 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 TSPAN17Q96FV3 270 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 TSNARE1Q96NA8 513 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 ZNF317Q96PQ6 595 aaPredicted RBP13.45□□□□□ -0.26
PTN-202ENST00000393083 OLFM1Q99784 485 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 NCDNQ9UBB6 729 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 EMCNQ9ULC0 261 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 ZFR2Q9UPR6 939 aaKnown RBP13.45□□□□□ -0.26
PTN-202ENST00000393083 SLCO1B1Q9Y6L6 691 aa13.45□□□□□ -0.26
PTN-202ENST00000393083 MEI4A8MW99 385 aa13.44□□□□□ -0.26
PTN-202ENST00000393083 PFDN6O15212 129 aa13.44□□□□□ -0.26
PTN-202ENST00000393083 RNGTTO60942 597 aaKnown RBP13.44□□□□□ -0.26
PTN-202ENST00000393083 SRP72O76094 671 aaKnown RBP13.44□□□□□ -0.26
PTN-202ENST00000393083 ITGALP20701 1170 aa13.44□□□□□ -0.26
PTN-202ENST00000393083 HOXD12P35452 270 aa13.44□□□□□ -0.26
PTN-202ENST00000393083 SERPINB4P48594 390 aa13.44□□□□□ -0.26
PTN-202ENST00000393083 TTPAP49638 278 aa13.44□□□□□ -0.26
PTN-202ENST00000393083 SUOXP51687 545 aa13.44□□□□□ -0.26
PTN-202ENST00000393083 IRX4P78413 519 aa13.44□□□□□ -0.26
PTN-202ENST00000393083 TAS2R42Q7RTR8 314 aa13.44□□□□□ -0.26
PTN-202ENST00000393083 PIANPQ8IYJ0 282 aa13.44□□□□□ -0.26
PTN-202ENST00000393083 PLD6Q8N2A8 252 aaKnown RBP13.44□□□□□ -0.26
PTN-202ENST00000393083 LRRC8CQ8TDW0 803 aa13.44□□□□□ -0.26
PTN-202ENST00000393083 LPGAT1Q92604 370 aa13.44□□□□□ -0.26
PTN-202ENST00000393083 TCF12Q99081 682 aa13.44□□□□□ -0.26
PTN-202ENST00000393083 NSRP1Q9H0G5 558 aaKnown RBP13.44□□□□□ -0.26
PTN-202ENST00000393083 PARD6AQ9NPB6 346 aa13.44□□□□□ -0.26
PTN-202ENST00000393083 PCDH12Q9NPG4 1184 aa13.44□□□□□ -0.26
PTN-202ENST00000393083 ZNF358Q9NW07 568 aa13.44□□□□□ -0.26
PTN-202ENST00000393083 TMEM216Q9P0N5 145 aa13.44□□□□□ -0.26
PTN-202ENST00000393083 EIF2B4Q9UI10 523 aaKnown RBP13.44□□□□□ -0.26
PTN-202ENST00000393083 APPL1Q9UKG1 709 aa13.44□□□□□ -0.26
PTN-202ENST00000393083 ITM2BQ9Y287 266 aa13.44□□□□□ -0.26
PTN-202ENST00000393083 VPS9D1Q9Y2B5 631 aa13.44□□□□□ -0.26
PTN-202ENST00000393083 ATXN2Q99700 1313 aaKnown RBP13.44□□□□□ -0.26
PTN-202ENST00000393083 EP300Q09472 2414 aaPredicted RBP13.43□□□□□ -0.26
PTN-202ENST00000393083 A0A087X1B8 175 aa13.43□□□□□ -0.26
PTN-202ENST00000393083 GLYATL1P3A0A0U1RQE8 302 aa13.43□□□□□ -0.26
PTN-202ENST00000393083 A0A1W2PPC4 97 aa13.43□□□□□ -0.26
PTN-202ENST00000393083 A0A1W2PQU0 124 aa13.43□□□□□ -0.26
PTN-202ENST00000393083 GAPDHSO14556 408 aaPredicted RBP13.43□□□□□ -0.26
PTN-202ENST00000393083 NDUFAB1O14561 156 aa13.43□□□□□ -0.26
PTN-202ENST00000393083 GPR39O43194 453 aa13.43□□□□□ -0.26
PTN-202ENST00000393083 TSPAN6O43657 245 aa13.43□□□□□ -0.26
PTN-202ENST00000393083 PLIN3O60664 434 aa13.43□□□□□ -0.26
PTN-202ENST00000393083 LRP3O75074 770 aa13.43□□□□□ -0.26
PTN-202ENST00000393083 FAM107AO95990 144 aa13.43□□□□□ -0.26
PTN-202ENST00000393083 PROCP04070 461 aa13.43□□□□□ -0.26
PTN-202ENST00000393083 NEFHP12036 1026 aa13.43□□□□□ -0.26
PTN-202ENST00000393083 ZNF30P17039 623 aa13.43□□□□□ -0.26
PTN-202ENST00000393083 TAC1P20366 129 aa13.43□□□□□ -0.26
PTN-202ENST00000393083 DRD4P21917 467 aa13.43□□□□□ -0.26
PTN-202ENST00000393083 CD27P26842 260 aa13.43□□□□□ -0.26
PTN-202ENST00000393083 DPP6P42658 865 aa13.43□□□□□ -0.26
PTN-202ENST00000393083 SPEM2Q0P670 501 aa13.43□□□□□ -0.26
PTN-202ENST00000393083 CCDC6Q16204 474 aa13.43□□□□□ -0.26
PTN-202ENST00000393083 ZNF284Q2VY69 593 aa13.43□□□□□ -0.26
PTN-202ENST00000393083 TMEM259Q4ZIN3 620 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms