RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 MRGPRX2Q96LB1 330 aa18.85■□□□□ 0.61
CCDC50-202ENST00000392456 FCRL3Q96P31 734 aaPredicted RBP18.85■□□□□ 0.61
CCDC50-202ENST00000392456 PAFAH2Q99487 392 aa18.85■□□□□ 0.61
CCDC50-202ENST00000392456 DOK1Q99704 481 aa18.85■□□□□ 0.61
CCDC50-202ENST00000392456 TRIT1Q9H3H1 467 aaKnown RBP18.85■□□□□ 0.61
CCDC50-202ENST00000392456 BCAP29Q9UHQ4 241 aa18.85■□□□□ 0.61
CCDC50-202ENST00000392456 CDC14AQ9UNH5 594 aa18.85■□□□□ 0.61
CCDC50-202ENST00000392456 CFL2Q9Y281 166 aa18.85■□□□□ 0.61
CCDC50-202ENST00000392456 A0A1W2PPM1 405 aa18.85■□□□□ 0.61
CCDC50-202ENST00000392456 SNAP91O60641 907 aa18.85■□□□□ 0.61
CCDC50-202ENST00000392456 H6PDO95479 791 aa18.85■□□□□ 0.61
CCDC50-202ENST00000392456 NKX2-5P52952 324 aaPredicted RBP18.85■□□□□ 0.61
CCDC50-202ENST00000392456 SLX4IPQ5VYV7 408 aa18.85■□□□□ 0.61
CCDC50-202ENST00000392456 LINGO4Q6UY18 593 aa18.85■□□□□ 0.61
CCDC50-202ENST00000392456 SETD3Q86TU7 594 aaPredicted RBP18.85■□□□□ 0.61
CCDC50-202ENST00000392456 GLMNQ92990 594 aa18.85■□□□□ 0.61
CCDC50-202ENST00000392456 ZNF778Q96MU6 729 aa18.85■□□□□ 0.61
CCDC50-202ENST00000392456 GDF15Q99988 308 aa18.85■□□□□ 0.61
CCDC50-202ENST00000392456 TSSK1BQ9BXA7 367 aa18.85■□□□□ 0.61
CCDC50-202ENST00000392456 PRKD2Q9BZL6 878 aa18.85■□□□□ 0.61
CCDC50-202ENST00000392456 RNF11Q9Y3C5 154 aa18.85■□□□□ 0.61
CCDC50-202ENST00000392456 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.84■□□□□ 0.61
CCDC50-202ENST00000392456 A0A1W2PPW3 197 aa18.84■□□□□ 0.61
CCDC50-202ENST00000392456 CCDC78A2IDD5 438 aa18.84■□□□□ 0.61
CCDC50-202ENST00000392456 TRIM64BA6NI03 449 aa18.84■□□□□ 0.61
CCDC50-202ENST00000392456 CBX4O00257 560 aa18.84■□□□□ 0.61
CCDC50-202ENST00000392456 JRKO75564 520 aa18.84■□□□□ 0.61
CCDC50-202ENST00000392456 AVPR1AP37288 418 aa18.84■□□□□ 0.61
CCDC50-202ENST00000392456 CD86P42081 329 aa18.84■□□□□ 0.61
CCDC50-202ENST00000392456 HSPA13P48723 471 aa18.84■□□□□ 0.61
CCDC50-202ENST00000392456 PRPSAP1Q14558 356 aa18.84■□□□□ 0.61
CCDC50-202ENST00000392456 PRSS36Q5K4E3 855 aa18.84■□□□□ 0.61
CCDC50-202ENST00000392456 CHST9Q7L1S5 443 aa18.84■□□□□ 0.61
CCDC50-202ENST00000392456 KBTBD6Q86V97 674 aa18.84■□□□□ 0.61
CCDC50-202ENST00000392456 FAM217AQ8IXS0 508 aa18.84■□□□□ 0.61
CCDC50-202ENST00000392456 DTX3Q8N9I9 347 aa18.84■□□□□ 0.61
CCDC50-202ENST00000392456 ST13P5Q8NFI4 369 aaPredicted RBP18.84■□□□□ 0.61
CCDC50-202ENST00000392456 ITFG1Q8TB96 612 aa18.84■□□□□ 0.61
CCDC50-202ENST00000392456 ARRDC2Q8TBH0 407 aa18.84■□□□□ 0.61
CCDC50-202ENST00000392456 GRIN3AQ8TCU5 1115 aa18.84■□□□□ 0.61
CCDC50-202ENST00000392456 SGCDQ92629 289 aa18.84■□□□□ 0.61
CCDC50-202ENST00000392456 ZUFSPQ96AP4 578 aa18.84■□□□□ 0.61
CCDC50-202ENST00000392456 GIMAP5Q96F15 307 aa18.84■□□□□ 0.61
CCDC50-202ENST00000392456 FICDQ9BVA6 458 aa18.84■□□□□ 0.61
CCDC50-202ENST00000392456 LRRC40Q9H9A6 602 aa18.84■□□□□ 0.61
CCDC50-202ENST00000392456 ATP13A1Q9HD20 1204 aa18.84■□□□□ 0.61
CCDC50-202ENST00000392456 SOX13Q9UN79 622 aa18.84■□□□□ 0.61
CCDC50-202ENST00000392456 NOSIPQ9Y314 301 aaKnown RBP18.84■□□□□ 0.61
CCDC50-202ENST00000392456 ATG2AQ2TAZ0 1938 aa18.84■□□□□ 0.61
CCDC50-202ENST00000392456 H0Y626 953 aa18.84■□□□□ 0.61
CCDC50-202ENST00000392456 H3BMQ9 156 aa18.84■□□□□ 0.61
CCDC50-202ENST00000392456 NUAK1O60285 661 aa18.84■□□□□ 0.61
CCDC50-202ENST00000392456 ADRA1AP35348 466 aa18.84■□□□□ 0.61
CCDC50-202ENST00000392456 RGRP47804 291 aa18.84■□□□□ 0.61
CCDC50-202ENST00000392456 NDUFAF5Q5TEU4 345 aa18.84■□□□□ 0.61
CCDC50-202ENST00000392456 PGM2L1Q6PCE3 622 aa18.84■□□□□ 0.61
CCDC50-202ENST00000392456 RNF135Q8IUD6 432 aa18.84■□□□□ 0.61
CCDC50-202ENST00000392456 TDRD5Q8NAT2 981 aaKnown RBP18.84■□□□□ 0.61
CCDC50-202ENST00000392456 DCAKDQ8WVC6 231 aa18.84■□□□□ 0.61
CCDC50-202ENST00000392456 FATE1Q969F0 183 aa18.84■□□□□ 0.61
CCDC50-202ENST00000392456 IMP4Q96G21 291 aaKnown RBP18.84■□□□□ 0.61
CCDC50-202ENST00000392456 COG8Q96MW5 612 aa18.84■□□□□ 0.61
CCDC50-202ENST00000392456 DHRS4Q9BTZ2 278 aa18.84■□□□□ 0.61
CCDC50-202ENST00000392456 SLC25A51Q9H1U9 297 aa18.84■□□□□ 0.61
CCDC50-202ENST00000392456 SSU72Q9NP77 194 aaKnown RBP18.84■□□□□ 0.61
CCDC50-202ENST00000392456 CHRAC1Q9NRG0 131 aa18.84■□□□□ 0.61
CCDC50-202ENST00000392456 ARHGAP26Q9UNA1 814 aa18.84■□□□□ 0.61
CCDC50-202ENST00000392456 PSMD13Q9UNM6 376 aa18.84■□□□□ 0.61
CCDC50-202ENST00000392456 AAR2Q9Y312 384 aaKnown RBP18.84■□□□□ 0.61
CCDC50-202ENST00000392456 ERI2A8K979 691 aaKnown RBP18.83■□□□□ 0.61
CCDC50-202ENST00000392456 H3BNH8 94 aa18.83■□□□□ 0.61
CCDC50-202ENST00000392456 LATS1O95835 1130 aa18.83■□□□□ 0.61
CCDC50-202ENST00000392456 CD160O95971 181 aa18.83■□□□□ 0.61
CCDC50-202ENST00000392456 CEBPBP17676 345 aa18.83■□□□□ 0.61
CCDC50-202ENST00000392456 ADRA1DP25100 572 aa18.83■□□□□ 0.61
CCDC50-202ENST00000392456 HOXA9P31269 272 aa18.83■□□□□ 0.61
CCDC50-202ENST00000392456 CHERPQ8IWX8 916 aaKnown RBP18.83■□□□□ 0.61
CCDC50-202ENST00000392456 CATSPER1Q8NEC5 780 aa18.83■□□□□ 0.61
CCDC50-202ENST00000392456 EXOC2Q96KP1 924 aa18.83■□□□□ 0.61
CCDC50-202ENST00000392456 SAMD11Q96NU1 681 aa18.83■□□□□ 0.61
CCDC50-202ENST00000392456 ACE2Q9BYF1 805 aaPredicted RBP18.83■□□□□ 0.61
CCDC50-202ENST00000392456 MUC3BQ9H195 1237 aa18.83■□□□□ 0.61
CCDC50-202ENST00000392456 LINC00597Q9H2U6 94 aa18.83■□□□□ 0.61
CCDC50-202ENST00000392456 TASP1Q9H6P5 420 aa18.83■□□□□ 0.61
CCDC50-202ENST00000392456 MANSC1Q9H8J5 431 aa18.83■□□□□ 0.61
CCDC50-202ENST00000392456 MOCS1Q9NZB8 636 aa18.83■□□□□ 0.61
CCDC50-202ENST00000392456 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.83■□□□□ 0.6
CCDC50-202ENST00000392456 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.83■□□□□ 0.6
CCDC50-202ENST00000392456 FADS2P1A8MWK0 482 aa18.83■□□□□ 0.6
CCDC50-202ENST00000392456 F7P08709 466 aaPredicted RBP18.83■□□□□ 0.6
CCDC50-202ENST00000392456 TSHRP16473 764 aa18.83■□□□□ 0.6
CCDC50-202ENST00000392456 CFL1P23528 166 aaKnown RBP18.83■□□□□ 0.6
CCDC50-202ENST00000392456 ARL1P40616 181 aaPredicted RBP18.83■□□□□ 0.6
CCDC50-202ENST00000392456 WNT3AP56704 352 aa18.83■□□□□ 0.6
CCDC50-202ENST00000392456 FGD3Q5JSP0 725 aa18.83■□□□□ 0.6
CCDC50-202ENST00000392456 KDELC1Q6UW63 502 aa18.83■□□□□ 0.6
CCDC50-202ENST00000392456 PPM1NQ8N819 430 aa18.83■□□□□ 0.6
CCDC50-202ENST00000392456 MFSD3Q96ES6 412 aa18.83■□□□□ 0.6
CCDC50-202ENST00000392456 TBL1YQ9BQ87 522 aa18.83■□□□□ 0.6
CCDC50-202ENST00000392456 APOL5Q9BWW9 433 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms