RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 GALNT1Q10472 559 aaPredicted RBP14.54□□□□□ -0.08
VPS9D1-201ENST00000389386 DUSP7Q16829 419 aa14.54□□□□□ -0.08
VPS9D1-201ENST00000389386 SMU1Q2TAY7 513 aa14.54□□□□□ -0.08
VPS9D1-201ENST00000389386 ATF7IP2Q5U623 682 aa14.54□□□□□ -0.08
VPS9D1-201ENST00000389386 LYPD8Q6UX82 237 aa14.54□□□□□ -0.08
VPS9D1-201ENST00000389386 PJA1Q8NG27 643 aa14.54□□□□□ -0.08
VPS9D1-201ENST00000389386 TRIM63Q969Q1 353 aa14.54□□□□□ -0.08
VPS9D1-201ENST00000389386 C11orf84Q9BUA3 381 aaPredicted RBP14.54□□□□□ -0.08
VPS9D1-201ENST00000389386 FAM49AQ9H0Q0 323 aaPredicted RBP14.54□□□□□ -0.08
VPS9D1-201ENST00000389386 MMP27Q9H306 513 aa14.54□□□□□ -0.08
VPS9D1-201ENST00000389386 RNF19AQ9NV58 838 aa14.54□□□□□ -0.08
VPS9D1-201ENST00000389386 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.54□□□□□ -0.08
VPS9D1-201ENST00000389386 PNMA8BQ9ULN7 279 aaPredicted RBP14.54□□□□□ -0.08
VPS9D1-201ENST00000389386 CAB39Q9Y376 341 aaPredicted RBP14.54□□□□□ -0.08
VPS9D1-201ENST00000389386 DNAJC25-GNG10A0A024R161 153 aa14.54□□□□□ -0.08
VPS9D1-201ENST00000389386 KCNK1O00180 336 aa14.54□□□□□ -0.08
VPS9D1-201ENST00000389386 MTSS1O43312 755 aa14.54□□□□□ -0.08
VPS9D1-201ENST00000389386 CCDC159P0C7I6 412 aa14.54□□□□□ -0.08
VPS9D1-201ENST00000389386 NPY2RP49146 381 aa14.54□□□□□ -0.08
VPS9D1-201ENST00000389386 KCNAB2Q13303 367 aa14.54□□□□□ -0.08
VPS9D1-201ENST00000389386 COQ5Q5HYK3 327 aa14.54□□□□□ -0.08
VPS9D1-201ENST00000389386 VARS2Q5ST30 1063 aaKnown RBP14.54□□□□□ -0.08
VPS9D1-201ENST00000389386 SYT6Q5T7P8 510 aaPredicted RBP14.54□□□□□ -0.08
VPS9D1-201ENST00000389386 KCTD11Q693B1 232 aa14.54□□□□□ -0.08
VPS9D1-201ENST00000389386 ARMCX2Q7L311 632 aa14.54□□□□□ -0.08
VPS9D1-201ENST00000389386 PLD3Q8IV08 490 aa14.54□□□□□ -0.08
VPS9D1-201ENST00000389386 DCP1BQ8IZD4 617 aaKnown RBP14.54□□□□□ -0.08
VPS9D1-201ENST00000389386 LSMEM1Q8N8F7 131 aa14.54□□□□□ -0.08
VPS9D1-201ENST00000389386 CENPIQ92674 756 aaPredicted RBP14.54□□□□□ -0.08
VPS9D1-201ENST00000389386 RPL3LQ92901 407 aaKnown RBP14.54□□□□□ -0.08
VPS9D1-201ENST00000389386 ERVK-18Q9QC07 812 aa14.54□□□□□ -0.08
VPS9D1-201ENST00000389386 GIMAP2Q9UG22 337 aa14.54□□□□□ -0.08
VPS9D1-201ENST00000389386 GINS2Q9Y248 185 aa14.54□□□□□ -0.08
VPS9D1-201ENST00000389386 TRIP11Q15643 1979 aa14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 A0A087WZ62 844 aa14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 FAM95CA0A1B0GW59 222 aa14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 XPNPEP2O43895 674 aa14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 B4GALT4O60513 344 aa14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 SLC25A27O95847 323 aa14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 INSRRP14616 1297 aa14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 EFNA5P52803 228 aa14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 PLK1P53350 603 aa14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 OR2B6P58173 313 aa14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 TAS2R39P59534 338 aa14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 KRR1Q13601 381 aaKnown RBP14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 PNCKQ6P2M8 343 aa14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 ZDHHC13Q8IUH4 622 aa14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 UBQLNLQ8IYU4 475 aa14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 MCOLN3Q8TDD5 553 aa14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 CCDC126Q96EE4 140 aa14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 ST6GAL2Q96JF0 529 aa14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 FAM167AQ96KS9 214 aa14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 APOL2Q9BQE5 337 aa14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 FDXACB1Q9BRP7 624 aaPredicted RBP14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 GSTO2Q9H4Y5 243 aa14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 SLA2Q9H6Q3 261 aa14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 PLSCR3Q9NRY6 295 aa14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 IGSF5Q9NSI5 407 aa14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 FBXL12Q9NXK8 326 aa14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 KLHL8Q9P2G9 620 aaPredicted RBP14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 PCDHGA10Q9Y5H3 936 aa14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 G3V2T6 193 aa14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 HAT1O14929 419 aa14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 KPNA6O60684 536 aa14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 NFICP08651 508 aa14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 ARL4AP40617 200 aa14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 ZNF135P52742 658 aaPredicted RBP14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 EEFSECP57772 596 aaKnown RBP14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 EPS8Q12929 822 aa14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 MXD4Q14582 209 aaPredicted RBP14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 ZNF404Q494X3 552 aa14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 FUT11Q495W5 492 aa14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 ZNF470Q6ECI4 717 aa14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 BLOC1S3Q6QNY0 202 aa14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 SPNS2Q8IVW8 549 aa14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 TP53INP2Q8IXH6 220 aa14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 GAD1Q99259 594 aa14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 GDF15Q99988 308 aa14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 GPBP1L1Q9HC44 474 aaPredicted RBP14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 TRIM39Q9HCM9 518 aa14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 EXD2Q9NVH0 621 aa14.53□□□□□ -0.08
VPS9D1-201ENST00000389386 A0A0G2JMZ2 1700 aa14.52□□□□□ -0.08
VPS9D1-201ENST00000389386 ZW10O43264 779 aa14.52□□□□□ -0.08
VPS9D1-201ENST00000389386 NOBOXO60393 691 aa14.52□□□□□ -0.08
VPS9D1-201ENST00000389386 MATN4O95460 622 aa14.52□□□□□ -0.08
VPS9D1-201ENST00000389386 HTR1EP28566 365 aa14.52□□□□□ -0.08
VPS9D1-201ENST00000389386 RRM2P31350 389 aa14.52□□□□□ -0.08
VPS9D1-201ENST00000389386 GGT5P36269 586 aa14.52□□□□□ -0.08
VPS9D1-201ENST00000389386 ADCYAP1R1P41586 468 aa14.52□□□□□ -0.08
VPS9D1-201ENST00000389386 FKBP1BP68106 108 aa14.52□□□□□ -0.08
VPS9D1-201ENST00000389386 CTBP1Q13363 440 aa14.52□□□□□ -0.08
VPS9D1-201ENST00000389386 NFYCQ13952 458 aa14.52□□□□□ -0.08
VPS9D1-201ENST00000389386 GRB7Q14451 532 aa14.52□□□□□ -0.08
VPS9D1-201ENST00000389386 POU6F1Q14863 301 aa14.52□□□□□ -0.08
VPS9D1-201ENST00000389386 TECRLQ5HYJ1 363 aa14.52□□□□□ -0.08
VPS9D1-201ENST00000389386 ANKRD34AQ69YU3 496 aa14.52□□□□□ -0.08
VPS9D1-201ENST00000389386 TXNDC11Q6PKC3 985 aa14.52□□□□□ -0.08
VPS9D1-201ENST00000389386 PROSER1Q86XN7 944 aa14.52□□□□□ -0.08
VPS9D1-201ENST00000389386 DENND6AQ8IWF6 608 aa14.52□□□□□ -0.08
VPS9D1-201ENST00000389386 NLGN4XQ8N0W4 816 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms