RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 MMP13P45452 471 aa9.47□□□□□ -0.89
IFT88-203ENST00000389373 CAPZBP47756 277 aa9.47□□□□□ -0.89
IFT88-203ENST00000389373 RRADP55042 308 aa9.47□□□□□ -0.89
IFT88-203ENST00000389373 ATP1A4Q13733 1029 aa9.47□□□□□ -0.89
IFT88-203ENST00000389373 LAMB3Q13751 1172 aa9.47□□□□□ -0.89
IFT88-203ENST00000389373 GPR18Q14330 331 aa9.47□□□□□ -0.89
IFT88-203ENST00000389373 LLGL1Q15334 1064 aa9.47□□□□□ -0.89
IFT88-203ENST00000389373 SYCP1Q15431 976 aa9.47□□□□□ -0.89
IFT88-203ENST00000389373 GPR19Q15760 415 aa9.47□□□□□ -0.89
IFT88-203ENST00000389373 VWA5B1Q5TIE3 1220 aa9.47□□□□□ -0.89
IFT88-203ENST00000389373 MARC1Q5VT66 337 aa9.47□□□□□ -0.89
IFT88-203ENST00000389373 PRAMEF17Q5VTA0 474 aa9.47□□□□□ -0.89
IFT88-203ENST00000389373 FJX1Q86VR8 437 aa9.47□□□□□ -0.89
IFT88-203ENST00000389373 ZBTB2Q8N680 514 aa9.47□□□□□ -0.89
IFT88-203ENST00000389373 AOPEPQ8N6M6 819 aa9.47□□□□□ -0.89
IFT88-203ENST00000389373 ADAMTS17Q8TE56 1095 aa9.47□□□□□ -0.89
IFT88-203ENST00000389373 SPOCK2Q92563 424 aa9.47□□□□□ -0.89
IFT88-203ENST00000389373 UBXN4Q92575 508 aa9.47□□□□□ -0.89
IFT88-203ENST00000389373 CLIP3Q96DZ5 547 aa9.47□□□□□ -0.89
IFT88-203ENST00000389373 ZNF514Q96K75 400 aaPredicted RBP9.47□□□□□ -0.89
IFT88-203ENST00000389373 WDR24Q96S15 920 aa9.47□□□□□ -0.89
IFT88-203ENST00000389373 MAP3K3Q99759 626 aa9.47□□□□□ -0.89
IFT88-203ENST00000389373 MGME1Q9BQP7 344 aa9.47□□□□□ -0.89
IFT88-203ENST00000389373 SNRNP25Q9BV90 132 aaKnown RBP9.47□□□□□ -0.89
IFT88-203ENST00000389373 FAM83DQ9H4H8 585 aa9.47□□□□□ -0.89
IFT88-203ENST00000389373 NLRC4Q9NPP4 1024 aa9.47□□□□□ -0.89
IFT88-203ENST00000389373 AGPAT4Q9NRZ5 378 aa9.47□□□□□ -0.89
IFT88-203ENST00000389373 KCND1Q9NSA2 647 aa9.47□□□□□ -0.89
IFT88-203ENST00000389373 C5AR2Q9P296 337 aa9.47□□□□□ -0.89
IFT88-203ENST00000389373 COPG2Q9UBF2 871 aa9.47□□□□□ -0.89
IFT88-203ENST00000389373 SLC23A2Q9UGH3 650 aa9.47□□□□□ -0.89
IFT88-203ENST00000389373 TCFL5Q9UL49 500 aa9.47□□□□□ -0.89
IFT88-203ENST00000389373 CHKBQ9Y259 395 aa9.47□□□□□ -0.89
IFT88-203ENST00000389373 NTNG1Q9Y2I2 539 aa9.47□□□□□ -0.89
IFT88-203ENST00000389373 CROCCQ5TZA2 2017 aa9.47□□□□□ -0.89
IFT88-203ENST00000389373 A0A0J9YYE9 177 aa9.46□□□□□ -0.9
IFT88-203ENST00000389373 SLC25A14O95258 325 aaPredicted RBP9.46□□□□□ -0.9
IFT88-203ENST00000389373 TRBC1P01850 177 aa9.46□□□□□ -0.9
IFT88-203ENST00000389373 ZNF7P17097 686 aaPredicted RBP9.46□□□□□ -0.9
IFT88-203ENST00000389373 PSMA2P25787 234 aa9.46□□□□□ -0.9
IFT88-203ENST00000389373 OTX2P32243 289 aa9.46□□□□□ -0.9
IFT88-203ENST00000389373 CA5AP35218 305 aa9.46□□□□□ -0.9
IFT88-203ENST00000389373 CLCNKAP51800 687 aa9.46□□□□□ -0.9
IFT88-203ENST00000389373 DRG2P55039 364 aaKnown RBP9.46□□□□□ -0.9
IFT88-203ENST00000389373 GSCP56915 257 aaPredicted RBP9.46□□□□□ -0.9
IFT88-203ENST00000389373 OGDHQ02218 1023 aa9.46□□□□□ -0.9
IFT88-203ENST00000389373 CLEC16AQ2KHT3 1053 aa9.46□□□□□ -0.9
IFT88-203ENST00000389373 MIIPQ5JXC2 388 aa9.46□□□□□ -0.9
IFT88-203ENST00000389373 IZUMO3Q5VZ72 239 aa9.46□□□□□ -0.9
IFT88-203ENST00000389373 BPHLQ86WA6 291 aaPredicted RBP9.46□□□□□ -0.9
IFT88-203ENST00000389373 ZADH2Q8N4Q0 377 aa9.46□□□□□ -0.9
IFT88-203ENST00000389373 SLC38A9Q8NBW4 561 aa9.46□□□□□ -0.9
IFT88-203ENST00000389373 ST6GALNAC3Q8NDV1 305 aa9.46□□□□□ -0.9
IFT88-203ENST00000389373 UBE2Q2Q8WVN8 375 aa9.46□□□□□ -0.9
IFT88-203ENST00000389373 INPP5DQ92835 1189 aa9.46□□□□□ -0.9
IFT88-203ENST00000389373 SLC41A2Q96JW4 573 aa9.46□□□□□ -0.9
IFT88-203ENST00000389373 LURAP1Q96LR2 239 aa9.46□□□□□ -0.9
IFT88-203ENST00000389373 SPATA16Q9BXB7 569 aa9.46□□□□□ -0.9
IFT88-203ENST00000389373 POT1Q9NUX5 634 aa9.46□□□□□ -0.9
IFT88-203ENST00000389373 PKD2L2Q9NZM6 624 aa9.46□□□□□ -0.9
IFT88-203ENST00000389373 CWC15Q9P013 229 aaKnown RBP9.46□□□□□ -0.9
IFT88-203ENST00000389373 EPHA6Q9UF33 1036 aa9.46□□□□□ -0.9
IFT88-203ENST00000389373 TTLL3Q9Y4R7 772 aa9.46□□□□□ -0.9
IFT88-203ENST00000389373 LRBAP50851 2863 aa9.46□□□□□ -0.9
IFT88-203ENST00000389373 C2CD3Q4AC94 2353 aa9.46□□□□□ -0.9
IFT88-203ENST00000389373 RP1L1Q8IWN7 2480 aaPredicted RBP9.46□□□□□ -0.9
IFT88-203ENST00000389373 C1orf232A0A0U1RR37 186 aa9.45□□□□□ -0.9
IFT88-203ENST00000389373 HEATR9A2RTY3 570 aa9.45□□□□□ -0.9
IFT88-203ENST00000389373 MEN1O00255 615 aa9.45□□□□□ -0.9
IFT88-203ENST00000389373 KMOO15229 486 aa9.45□□□□□ -0.9
IFT88-203ENST00000389373 MAFKO60675 156 aa9.45□□□□□ -0.9
IFT88-203ENST00000389373 PEX11BO96011 259 aa9.45□□□□□ -0.9
IFT88-203ENST00000389373 JCHAINP01591 159 aa9.45□□□□□ -0.9
IFT88-203ENST00000389373 ALPPP05187 535 aa9.45□□□□□ -0.9
IFT88-203ENST00000389373 RAB40ALP0C0E4 278 aa9.45□□□□□ -0.9
IFT88-203ENST00000389373 BRAFP15056 766 aa9.45□□□□□ -0.9
IFT88-203ENST00000389373 AMPD1P23109 780 aa9.45□□□□□ -0.9
IFT88-203ENST00000389373 IL4RP24394 825 aa9.45□□□□□ -0.9
IFT88-203ENST00000389373 SOX5P35711 763 aa9.45□□□□□ -0.9
IFT88-203ENST00000389373 SPINT3P49223 89 aa9.45□□□□□ -0.9
IFT88-203ENST00000389373 KLK7P49862 253 aa9.45□□□□□ -0.9
IFT88-203ENST00000389373 GSDMDP57764 484 aa9.45□□□□□ -0.9
IFT88-203ENST00000389373 POLR2FP61218 127 aaKnown RBP9.45□□□□□ -0.9
IFT88-203ENST00000389373 PLCL1Q15111 1095 aa9.45□□□□□ -0.9
IFT88-203ENST00000389373 ANO6Q4KMQ2 910 aa9.45□□□□□ -0.9
IFT88-203ENST00000389373 DNTTIP2Q5QJE6 756 aaKnown RBP9.45□□□□□ -0.9
IFT88-203ENST00000389373 PLEKHS1Q5SXH7 462 aa9.45□□□□□ -0.9
IFT88-203ENST00000389373 ALS2CLQ60I27 953 aa9.45□□□□□ -0.9
IFT88-203ENST00000389373 FBXO38Q6PIJ6 1188 aa9.45□□□□□ -0.9
IFT88-203ENST00000389373 MON1BQ7L1V2 547 aa9.45□□□□□ -0.9
IFT88-203ENST00000389373 GDF7Q7Z4P5 450 aa9.45□□□□□ -0.9
IFT88-203ENST00000389373 ADGRG6Q86SQ4 1221 aa9.45□□□□□ -0.9
IFT88-203ENST00000389373 LRRTM4Q86VH4 590 aa9.45□□□□□ -0.9
IFT88-203ENST00000389373 KCNMB4Q86W47 210 aa9.45□□□□□ -0.9
IFT88-203ENST00000389373 PHF13Q86YI8 300 aaPredicted RBP9.45□□□□□ -0.9
IFT88-203ENST00000389373 ATPAF2Q8N5M1 289 aa9.45□□□□□ -0.9
IFT88-203ENST00000389373 LPCAT1Q8NF37 534 aa9.45□□□□□ -0.9
IFT88-203ENST00000389373 CCHCR1Q8TD31 782 aa9.45□□□□□ -0.9
IFT88-203ENST00000389373 ZNF653Q96CK0 615 aa9.45□□□□□ -0.9
IFT88-203ENST00000389373 PEBP4Q96S96 227 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms