RNA–Protein interactions for RNA: ENST00000382515.6

CD9-202, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-202ENST00000382515 CYS1Q717R9 158 aa17.45■□□□□ 0.38
CD9-202ENST00000382515 LRRTM4Q86VH4 590 aa17.45■□□□□ 0.38
CD9-202ENST00000382515 IFT20Q8IY31 132 aa17.45■□□□□ 0.38
CD9-202ENST00000382515 FAM181AQ8N9Y4 354 aa17.45■□□□□ 0.38
CD9-202ENST00000382515 OR2I1PQ8NGU4 316 aa17.45■□□□□ 0.38
CD9-202ENST00000382515 RHBDD1Q8TEB9 315 aa17.45■□□□□ 0.38
CD9-202ENST00000382515 PDXPQ96GD0 296 aa17.45■□□□□ 0.38
CD9-202ENST00000382515 LINC00615Q96LM1 132 aaPredicted RBP17.45■□□□□ 0.38
CD9-202ENST00000382515 TIMM29Q9BSF4 260 aa17.45■□□□□ 0.38
CD9-202ENST00000382515 LRRC61Q9BV99 259 aa17.45■□□□□ 0.38
CD9-202ENST00000382515 VPS37BQ9H9H4 285 aa17.45■□□□□ 0.38
CD9-202ENST00000382515 EPB41L5Q9HCM4 733 aa17.45■□□□□ 0.38
CD9-202ENST00000382515 MRPL40Q9NQ50 206 aaKnown RBP17.45■□□□□ 0.38
CD9-202ENST00000382515 CATSPERZQ9NTU4 200 aa17.45■□□□□ 0.38
CD9-202ENST00000382515 MTRF1LQ9UGC7 380 aaKnown RBP17.45■□□□□ 0.38
CD9-202ENST00000382515 PNMA8BQ9ULN7 279 aaPredicted RBP17.45■□□□□ 0.38
CD9-202ENST00000382515 GPSM3Q9Y4H4 160 aa17.45■□□□□ 0.38
CD9-202ENST00000382515 CABIN1Q9Y6J0 2220 aa17.45■□□□□ 0.38
CD9-202ENST00000382515 ZCWPW2A0A1B0GU75 182 aa17.44■□□□□ 0.38
CD9-202ENST00000382515 C17orf113A0A1B0GUU1 675 aa17.44■□□□□ 0.38
CD9-202ENST00000382515 PMLP29590 882 aa17.44■□□□□ 0.38
CD9-202ENST00000382515 ILF2Q12905 390 aaKnown RBP17.44■□□□□ 0.38
CD9-202ENST00000382515 CUL1Q13616 776 aa17.44■□□□□ 0.38
CD9-202ENST00000382515 THOC5Q13769 683 aaKnown RBP17.44■□□□□ 0.38
CD9-202ENST00000382515 RNF187Q5TA31 235 aaPredicted RBP17.44■□□□□ 0.38
CD9-202ENST00000382515 NEPROQ6NW34 567 aa17.44■□□□□ 0.38
CD9-202ENST00000382515 PACS1Q6VY07 963 aa17.44■□□□□ 0.38
CD9-202ENST00000382515 PIP4P1Q86T03 277 aa17.44■□□□□ 0.38
CD9-202ENST00000382515 TRIM74Q86UV6 250 aa17.44■□□□□ 0.38
CD9-202ENST00000382515 LRRC6Q86X45 466 aa17.44■□□□□ 0.38
CD9-202ENST00000382515 PIANPQ8IYJ0 282 aa17.44■□□□□ 0.38
CD9-202ENST00000382515 RBFAQ8N0V3 343 aa17.44■□□□□ 0.38
CD9-202ENST00000382515 EIF1ADQ8N9N8 165 aaKnown RBP17.44■□□□□ 0.38
CD9-202ENST00000382515 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.44■□□□□ 0.38
CD9-202ENST00000382515 OR4C6Q8NH72 309 aa17.44■□□□□ 0.38
CD9-202ENST00000382515 FBXO25Q8TCJ0 367 aa17.44■□□□□ 0.38
CD9-202ENST00000382515 SETD7Q8WTS6 366 aaKnown RBP17.44■□□□□ 0.38
CD9-202ENST00000382515 TMEM168Q9H0V1 697 aa17.44■□□□□ 0.38
CD9-202ENST00000382515 ZC3H7BQ9UGR2 993 aaKnown RBP17.44■□□□□ 0.38
CD9-202ENST00000382515 DMGDHQ9UI17 866 aaKnown RBP17.44■□□□□ 0.38
CD9-202ENST00000382515 DOCK9Q9BZ29 2069 aa17.44■□□□□ 0.38
CD9-202ENST00000382515 PCDH15Q96QU1 1955 aa17.43■□□□□ 0.38
CD9-202ENST00000382515 CCDC78A2IDD5 438 aa17.43■□□□□ 0.38
CD9-202ENST00000382515 CCL22O00626 93 aa17.43■□□□□ 0.38
CD9-202ENST00000382515 YY2O15391 372 aa17.43■□□□□ 0.38
CD9-202ENST00000382515 GSTA2P09210 222 aa17.43■□□□□ 0.38
CD9-202ENST00000382515 CEACAM1P13688 526 aa17.43■□□□□ 0.38
CD9-202ENST00000382515 OGNP20774 298 aaKnown RBP17.43■□□□□ 0.38
CD9-202ENST00000382515 ELK3P41970 407 aa17.43■□□□□ 0.38
CD9-202ENST00000382515 RPIAP49247 311 aa17.43■□□□□ 0.38
CD9-202ENST00000382515 ADARP55265 1226 aaKnown RBP17.43■□□□□ 0.38
CD9-202ENST00000382515 PDIA2Q13087 525 aaKnown RBP17.43■□□□□ 0.38
CD9-202ENST00000382515 BCL7AQ4VC05 210 aa17.43■□□□□ 0.38
CD9-202ENST00000382515 MSS51Q4VC12 460 aa17.43■□□□□ 0.38
CD9-202ENST00000382515 PSAPL1Q6NUJ1 521 aa17.43■□□□□ 0.38
CD9-202ENST00000382515 ZCCHC8Q6NZY4 707 aaKnown RBP17.43■□□□□ 0.38
CD9-202ENST00000382515 ZNF449Q6P9G9 518 aa17.43■□□□□ 0.38
CD9-202ENST00000382515 OGFOD3Q6PK18 319 aa17.43■□□□□ 0.38
CD9-202ENST00000382515 TMEM220Q6QAJ8 160 aa17.43■□□□□ 0.38
CD9-202ENST00000382515 MARK2Q7KZI7 788 aaKnown RBP17.43■□□□□ 0.38
CD9-202ENST00000382515 TAF8Q7Z7C8 310 aa17.43■□□□□ 0.38
CD9-202ENST00000382515 NAXDQ8IW45 347 aa17.43■□□□□ 0.38
CD9-202ENST00000382515 BEND7Q8N7W2 519 aaPredicted RBP17.43■□□□□ 0.38
CD9-202ENST00000382515 RASGEF1AQ8N9B8 481 aa17.43■□□□□ 0.38
CD9-202ENST00000382515 OR6C4Q8NGE1 309 aa17.43■□□□□ 0.38
CD9-202ENST00000382515 PYROXD1Q8WU10 500 aa17.43■□□□□ 0.38
CD9-202ENST00000382515 ZNF669Q96BR6 464 aaPredicted RBP17.43■□□□□ 0.38
CD9-202ENST00000382515 FCRL3Q96P31 734 aaPredicted RBP17.43■□□□□ 0.38
CD9-202ENST00000382515 CLPBQ9H078 707 aa17.43■□□□□ 0.38
CD9-202ENST00000382515 TCEAL2Q9H3H9 227 aaPredicted RBP17.43■□□□□ 0.38
CD9-202ENST00000382515 DLL3Q9NYJ7 618 aa17.43■□□□□ 0.38
CD9-202ENST00000382515 RALGAPA1Q6GYQ0 2036 aa17.42■□□□□ 0.38
CD9-202ENST00000382515 PLXNA2O75051 1894 aa17.42■□□□□ 0.38
CD9-202ENST00000382515 OR5K4A6NMS3 321 aa17.42■□□□□ 0.38
CD9-202ENST00000382515 SH3BP5O60239 455 aa17.42■□□□□ 0.38
CD9-202ENST00000382515 SDC3O75056 442 aa17.42■□□□□ 0.38
CD9-202ENST00000382515 NDUFS3O75489 264 aa17.42■□□□□ 0.38
CD9-202ENST00000382515 OR56A5P0C7T3 313 aa17.42■□□□□ 0.38
CD9-202ENST00000382515 CDK4P11802 303 aa17.42■□□□□ 0.38
CD9-202ENST00000382515 SLC2A4P14672 509 aa17.42■□□□□ 0.38
CD9-202ENST00000382515 ARNTP27540 789 aa17.42■□□□□ 0.38
CD9-202ENST00000382515 DUSP3P51452 185 aaPredicted RBP17.42■□□□□ 0.38
CD9-202ENST00000382515 IL9RQ01113 521 aa17.42■□□□□ 0.38
CD9-202ENST00000382515 CTBSQ01459 385 aa17.42■□□□□ 0.38
CD9-202ENST00000382515 PLOD1Q02809 727 aaPredicted RBP17.42■□□□□ 0.38
CD9-202ENST00000382515 DMPKQ09013 629 aa17.42■□□□□ 0.38
CD9-202ENST00000382515 DBN1Q16643 649 aa17.42■□□□□ 0.38
CD9-202ENST00000382515 RSPO4Q2I0M5 234 aaPredicted RBP17.42■□□□□ 0.38
CD9-202ENST00000382515 CES3Q6UWW8 571 aa17.42■□□□□ 0.38
CD9-202ENST00000382515 CHST15Q7LFX5 561 aaPredicted RBP17.42■□□□□ 0.38
CD9-202ENST00000382515 AMZ2Q86W34 360 aa17.42■□□□□ 0.38
CD9-202ENST00000382515 GATAD2AQ86YP4 633 aa17.42■□□□□ 0.38
CD9-202ENST00000382515 TRAPPC5Q8IUR0 188 aa17.42■□□□□ 0.38
CD9-202ENST00000382515 PALM2Q8IXS6 379 aa17.42■□□□□ 0.38
CD9-202ENST00000382515 AGGF1Q8N302 714 aaeCLIP17.42■□□□□ 0.38
CD9-202ENST00000382515 FAM167BQ9BTA0 163 aa17.42■□□□□ 0.38
CD9-202ENST00000382515 TSSK1BQ9BXA7 367 aa17.42■□□□□ 0.38
CD9-202ENST00000382515 FAM96AQ9H5X1 160 aa17.42■□□□□ 0.38
CD9-202ENST00000382515 INTS10Q9NVR2 710 aaKnown RBP17.42■□□□□ 0.38
CD9-202ENST00000382515 UCKL1Q9NWZ5 548 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms