RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 C19orf57Q0VDD7 668 aa9.14□□□□□ -0.95
HMGN1-202ENST00000380747 ILF3Q12906 894 aaKnown RBP eCLIP9.14□□□□□ -0.95
HMGN1-202ENST00000380747 POU6F1Q14863 301 aa9.14□□□□□ -0.95
HMGN1-202ENST00000380747 CHRNA6Q15825 494 aa9.14□□□□□ -0.95
HMGN1-202ENST00000380747 KCTD19Q17RG1 926 aaPredicted RBP9.14□□□□□ -0.95
HMGN1-202ENST00000380747 PDPK2PQ6A1A2 396 aa9.14□□□□□ -0.95
HMGN1-202ENST00000380747 LVRNQ6Q4G3 990 aa9.14□□□□□ -0.95
HMGN1-202ENST00000380747 EFL1Q7Z2Z2 1120 aaKnown RBP9.14□□□□□ -0.95
HMGN1-202ENST00000380747 LINC00523Q86TU6 105 aa9.14□□□□□ -0.95
HMGN1-202ENST00000380747 SLC35F3Q8IY50 421 aa9.14□□□□□ -0.95
HMGN1-202ENST00000380747 CCDC116Q8IYX3 515 aa9.14□□□□□ -0.95
HMGN1-202ENST00000380747 C17orf53Q8N3J3 647 aaPredicted RBP9.14□□□□□ -0.95
HMGN1-202ENST00000380747 DNAAF3Q8N9W5 541 aa9.14□□□□□ -0.95
HMGN1-202ENST00000380747 KYQ8NBH2 561 aa9.14□□□□□ -0.95
HMGN1-202ENST00000380747 FAM46DQ8NEK8 389 aa9.14□□□□□ -0.95
HMGN1-202ENST00000380747 OR4K2Q8NGD2 314 aa9.14□□□□□ -0.95
HMGN1-202ENST00000380747 OR52K1Q8NGK4 314 aa9.14□□□□□ -0.95
HMGN1-202ENST00000380747 IFI44Q8TCB0 444 aa9.14□□□□□ -0.95
HMGN1-202ENST00000380747 BRSK1Q8TDC3 778 aa9.14□□□□□ -0.95
HMGN1-202ENST00000380747 MAGOHBQ96A72 148 aaKnown RBP9.14□□□□□ -0.95
HMGN1-202ENST00000380747 GSDMCQ9BYG8 508 aa9.14□□□□□ -0.95
HMGN1-202ENST00000380747 OR2AG1Q9H205 316 aa9.14□□□□□ -0.95
HMGN1-202ENST00000380747 DPEP2Q9H4A9 486 aa9.14□□□□□ -0.95
HMGN1-202ENST00000380747 TRIM39Q9HCM9 518 aa9.14□□□□□ -0.95
HMGN1-202ENST00000380747 TRNAU1APQ9NX07 287 aaKnown RBP9.14□□□□□ -0.95
HMGN1-202ENST00000380747 NCKIPSDQ9NZQ3 722 aa9.14□□□□□ -0.95
HMGN1-202ENST00000380747 VPS18Q9P253 973 aa9.14□□□□□ -0.95
HMGN1-202ENST00000380747 ATXN10Q9UBB4 475 aa9.14□□□□□ -0.95
HMGN1-202ENST00000380747 TTC7AQ9ULT0 858 aaPredicted RBP9.14□□□□□ -0.95
HMGN1-202ENST00000380747 PLEKHM1Q9Y4G2 1056 aa9.14□□□□□ -0.95
HMGN1-202ENST00000380747 PCDHGA1Q9Y5H4 931 aa9.14□□□□□ -0.95
HMGN1-202ENST00000380747 MYO18BQ8IUG5 2567 aa9.14□□□□□ -0.95
HMGN1-202ENST00000380747 COL5A1P20908 1838 aaPredicted RBP9.13□□□□□ -0.95
HMGN1-202ENST00000380747 LY6G6EA0A0G2JKS1 128 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 GOLGA6L10A0A0M3HER8 536 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 CCDC78A2IDD5 438 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 CTAGE9A4FU28 777 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 B4DGG1 531 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 CCL22O00626 93 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 CES2O00748 559 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 GRID2O43424 1007 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 UGT1A9O60656 530 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 DNAJC6O75061 913 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 PPFIA2O75334 1257 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 PRAMEF1O95521 474 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 KRT14P02533 472 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 APRTP07741 180 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 ACP5P13686 325 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 ZNF8P17098 575 aaPredicted RBP9.13□□□□□ -0.95
HMGN1-202ENST00000380747 UGT1A6P19224 532 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 UGT1A1P22309 533 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 UGT1A4P22310 534 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 AK4P27144 223 aaPredicted RBP9.13□□□□□ -0.95
HMGN1-202ENST00000380747 UGT1A3P35503 534 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 UGT1A5P35504 534 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 ACTR1BP42025 376 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 CLDN6P56747 220 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 ACTR1AP61163 376 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 PDE1BQ01064 536 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 CDH17Q12864 832 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 ILKQ13418 452 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 SEMA5AQ13591 1074 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 GTF2H3Q13889 308 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 TRIP13Q15645 432 aaPredicted RBP9.13□□□□□ -0.95
HMGN1-202ENST00000380747 ATP13A5Q4VNC0 1218 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 PYCR3Q53H96 274 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 TTC27Q6P3X3 843 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 GUSBP11Q6P575 273 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 SLC30A9Q6PML9 568 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 CRTC3Q6UUV7 619 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 C4orf22Q6V702 233 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 CHST15Q7LFX5 561 aaPredicted RBP9.13□□□□□ -0.95
HMGN1-202ENST00000380747 ADGRG6Q86SQ4 1221 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 NRROSQ86YC3 692 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 SDR16C5Q8N3Y7 309 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 ARL10Q8N8L6 244 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 OR13C4Q8NGS5 318 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 MAPK15Q8TD08 544 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 ZNF398Q8TD17 642 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 ACTRT1Q8TDG2 376 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 GPBAR1Q8TDU6 330 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 SCARF2Q96GP6 870 aaPredicted RBP9.13□□□□□ -0.95
HMGN1-202ENST00000380747 CAPZA3Q96KX2 299 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 VPS35Q96QK1 796 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 NAPGQ99747 312 aaPredicted RBP9.13□□□□□ -0.95
HMGN1-202ENST00000380747 BOCQ9BWV1 1114 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 SYNDIG1Q9H7V2 258 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 RMI1Q9H9A7 625 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 UGT1A7Q9HAW7 530 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 UGT1A10Q9HAW8 530 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 UGT1A8Q9HAW9 530 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 TAAR2Q9P1P5 351 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 TMPRSS11EQ9UL52 423 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 PADI4Q9UM07 663 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 U3KQA8 63 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 PTPRBP23467 1997 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 HECTD1Q9ULT8 2610 aa9.13□□□□□ -0.95
HMGN1-202ENST00000380747 TRABD2BA6NFA1 517 aa9.12□□□□□ -0.95
HMGN1-202ENST00000380747 GPR39O43194 453 aa9.12□□□□□ -0.95
HMGN1-202ENST00000380747 LDB2O43679 373 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms