RNA–Protein interactions for RNA: ENST00000380746.8

DNMT3A-203, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-203ENST00000380746 CFAP97Q9P2B7 532 aa10.85□□□□□ -0.67
DNMT3A-203ENST00000380746 LIMD1Q9UGP4 676 aa10.85□□□□□ -0.67
DNMT3A-203ENST00000380746 PCDHGA7Q9Y5G6 932 aa10.85□□□□□ -0.67
DNMT3A-203ENST00000380746 CROCCQ5TZA2 2017 aa10.85□□□□□ -0.67
DNMT3A-203ENST00000380746 A0A1W2PRU2 124 aa10.85□□□□□ -0.67
DNMT3A-203ENST00000380746 TUFMP49411 452 aaKnown RBP10.85□□□□□ -0.67
DNMT3A-203ENST00000380746 PTGR1Q14914 329 aa10.85□□□□□ -0.67
DNMT3A-203ENST00000380746 NADK2Q4G0N4 442 aa10.85□□□□□ -0.67
DNMT3A-203ENST00000380746 AFTPHQ6ULP2 937 aa10.85□□□□□ -0.67
DNMT3A-203ENST00000380746 DNAJB7Q7Z6W7 309 aaPredicted RBP10.85□□□□□ -0.67
DNMT3A-203ENST00000380746 SERPINA9Q86WD7 417 aa10.85□□□□□ -0.67
DNMT3A-203ENST00000380746 CMTM8Q8IZV2 173 aa10.85□□□□□ -0.67
DNMT3A-203ENST00000380746 APCDD1Q8J025 514 aa10.85□□□□□ -0.67
DNMT3A-203ENST00000380746 LMNTD1Q8N9Z9 388 aa10.85□□□□□ -0.67
DNMT3A-203ENST00000380746 OR56A4Q8NGH8 313 aa10.85□□□□□ -0.67
DNMT3A-203ENST00000380746 FUBP3Q96I24 572 aaKnown RBP eCLIP10.85□□□□□ -0.67
DNMT3A-203ENST00000380746 PPP1R2P1Q96PQ5 205 aa10.85□□□□□ -0.67
DNMT3A-203ENST00000380746 MTG2Q9H4K7 406 aa10.85□□□□□ -0.67
DNMT3A-203ENST00000380746 ARL15Q9NXU5 204 aa10.85□□□□□ -0.67
DNMT3A-203ENST00000380746 C6orf203Q9P0P8 240 aaPredicted RBP10.85□□□□□ -0.67
DNMT3A-203ENST00000380746 RANBP2P49792 3224 aaKnown RBP10.84□□□□□ -0.67
DNMT3A-203ENST00000380746 PRR23AA6NEV1 266 aa10.84□□□□□ -0.67
DNMT3A-203ENST00000380746 H3BSA7 217 aa10.84□□□□□ -0.67
DNMT3A-203ENST00000380746 AGRPO00253 132 aa10.84□□□□□ -0.67
DNMT3A-203ENST00000380746 URODP06132 367 aa10.84□□□□□ -0.67
DNMT3A-203ENST00000380746 ABCB1P08183 1280 aaPredicted RBP10.84□□□□□ -0.67
DNMT3A-203ENST00000380746 LIPEQ05469 1076 aa10.84□□□□□ -0.67
DNMT3A-203ENST00000380746 LCP2Q13094 533 aa10.84□□□□□ -0.67
DNMT3A-203ENST00000380746 ZNF648Q5T619 568 aaPredicted RBP10.84□□□□□ -0.67
DNMT3A-203ENST00000380746 SYVN1Q86TM6 617 aa10.84□□□□□ -0.67
DNMT3A-203ENST00000380746 SLC39A13Q96H72 371 aa10.84□□□□□ -0.67
DNMT3A-203ENST00000380746 ZBTB18Q99592 522 aa10.84□□□□□ -0.67
DNMT3A-203ENST00000380746 SRRDQ9UH36 339 aa10.84□□□□□ -0.67
DNMT3A-203ENST00000380746 CNOT6Q9ULM6 557 aaKnown RBP10.84□□□□□ -0.67
DNMT3A-203ENST00000380746 FAF1Q9UNN5 650 aaPredicted RBP10.84□□□□□ -0.67
DNMT3A-203ENST00000380746 OR2AG2A6NM03 316 aa10.84□□□□□ -0.67
DNMT3A-203ENST00000380746 SYCE1LA8MT33 242 aa10.84□□□□□ -0.67
DNMT3A-203ENST00000380746 PTGES3LE9PB15 166 aa10.84□□□□□ -0.67
DNMT3A-203ENST00000380746 STC2O76061 302 aa10.84□□□□□ -0.67
DNMT3A-203ENST00000380746 NTRK1P04629 796 aa10.84□□□□□ -0.67
DNMT3A-203ENST00000380746 ATP5BP06576 529 aaKnown RBP10.84□□□□□ -0.67
DNMT3A-203ENST00000380746 NAT2P11245 290 aa10.84□□□□□ -0.67
DNMT3A-203ENST00000380746 FASP25445 335 aa10.84□□□□□ -0.67
DNMT3A-203ENST00000380746 IST1P53990 364 aa10.84□□□□□ -0.67
DNMT3A-203ENST00000380746 YBEYP58557 167 aaPredicted RBP10.84□□□□□ -0.67
DNMT3A-203ENST00000380746 CBX2Q14781 532 aaPredicted RBP10.84□□□□□ -0.67
DNMT3A-203ENST00000380746 NUMA1Q14980 2115 aa10.84□□□□□ -0.67
DNMT3A-203ENST00000380746 RFLNAQ6ZTI6 216 aa10.84□□□□□ -0.67
DNMT3A-203ENST00000380746 TSPAN33Q86UF1 283 aa10.84□□□□□ -0.67
DNMT3A-203ENST00000380746 CLVS1Q8IUQ0 354 aaPredicted RBP10.84□□□□□ -0.67
DNMT3A-203ENST00000380746 PTCD2Q8WV60 388 aaKnown RBP10.84□□□□□ -0.67
DNMT3A-203ENST00000380746 TMIGD2Q96BF3 282 aa10.84□□□□□ -0.67
DNMT3A-203ENST00000380746 MED8Q96G25 268 aa10.84□□□□□ -0.67
DNMT3A-203ENST00000380746 NR1H4Q96RI1 486 aaPredicted RBP10.84□□□□□ -0.67
DNMT3A-203ENST00000380746 CENPOQ9BU64 300 aa10.84□□□□□ -0.67
DNMT3A-203ENST00000380746 FARSBQ9NSD9 589 aaKnown RBP10.84□□□□□ -0.67
DNMT3A-203ENST00000380746 OAZ3Q9UMX2 235 aa10.84□□□□□ -0.67
DNMT3A-203ENST00000380746 MAGED1Q9Y5V3 778 aaPredicted RBP10.84□□□□□ -0.67
DNMT3A-203ENST00000380746 CLOCKO15516 846 aa10.83□□□□□ -0.67
DNMT3A-203ENST00000380746 SLC22A3O75751 556 aa10.83□□□□□ -0.67
DNMT3A-203ENST00000380746 ZBTB11O95625 1053 aaPredicted RBP10.83□□□□□ -0.67
DNMT3A-203ENST00000380746 CPSF4O95639 269 aaKnown RBP10.83□□□□□ -0.67
DNMT3A-203ENST00000380746 ZNF682O95780 498 aa10.83□□□□□ -0.67
DNMT3A-203ENST00000380746 CYBBP04839 570 aa10.83□□□□□ -0.67
DNMT3A-203ENST00000380746 GNAO1P09471 354 aa10.83□□□□□ -0.67
DNMT3A-203ENST00000380746 HALP42357 657 aa10.83□□□□□ -0.67
DNMT3A-203ENST00000380746 DEFB115Q30KQ5 88 aa10.83□□□□□ -0.67
DNMT3A-203ENST00000380746 LRRC23Q53EV4 343 aaPredicted RBP10.83□□□□□ -0.67
DNMT3A-203ENST00000380746 BNIPLQ7Z465 357 aa10.83□□□□□ -0.67
DNMT3A-203ENST00000380746 DDX53Q86TM3 631 aaKnown RBP10.83□□□□□ -0.67
DNMT3A-203ENST00000380746 TSPAN14Q8NG11 270 aa10.83□□□□□ -0.67
DNMT3A-203ENST00000380746 FAM162AQ96A26 154 aa10.83□□□□□ -0.67
DNMT3A-203ENST00000380746 FBXL20Q96IG2 436 aa10.83□□□□□ -0.67
DNMT3A-203ENST00000380746 CCDC138Q96M89 665 aa10.83□□□□□ -0.67
DNMT3A-203ENST00000380746 ZFYVE1Q9HBF4 777 aa10.83□□□□□ -0.67
DNMT3A-203ENST00000380746 HPS4Q9NQG7 708 aa10.83□□□□□ -0.67
DNMT3A-203ENST00000380746 RHBDL2Q9NX52 303 aa10.83□□□□□ -0.67
DNMT3A-203ENST00000380746 SYN3O14994 580 aa10.83□□□□□ -0.68
DNMT3A-203ENST00000380746 CLDN11O75508 207 aa10.83□□□□□ -0.68
DNMT3A-203ENST00000380746 OXTRP30559 389 aa10.83□□□□□ -0.68
DNMT3A-203ENST00000380746 MAGEA12P43365 314 aa10.83□□□□□ -0.68
DNMT3A-203ENST00000380746 RECQLP46063 649 aaPredicted RBP10.83□□□□□ -0.68
DNMT3A-203ENST00000380746 MANEALQ5VSG8 457 aa10.83□□□□□ -0.68
DNMT3A-203ENST00000380746 SZRD1Q7Z422 152 aa10.83□□□□□ -0.68
DNMT3A-203ENST00000380746 GALNT10Q86SR1 603 aa10.83□□□□□ -0.68
DNMT3A-203ENST00000380746 LRRC49Q8IUZ0 686 aa10.83□□□□□ -0.68
DNMT3A-203ENST00000380746 WFDC5Q8TCV5 224 aa10.83□□□□□ -0.68
DNMT3A-203ENST00000380746 SORCS1Q8WY21 1168 aa10.83□□□□□ -0.68
DNMT3A-203ENST00000380746 SDCCAG3Q96C92 435 aa10.83□□□□□ -0.68
DNMT3A-203ENST00000380746 FEM1CQ96JP0 617 aa10.83□□□□□ -0.68
DNMT3A-203ENST00000380746 RIC8BQ9NVN3 520 aa10.83□□□□□ -0.68
DNMT3A-203ENST00000380746 A0A1B0GVM2 712 aa10.83□□□□□ -0.68
DNMT3A-203ENST00000380746 DYTNA2CJ06 578 aa10.83□□□□□ -0.68
DNMT3A-203ENST00000380746 ZNF840PA6NDX5 716 aa10.83□□□□□ -0.68
DNMT3A-203ENST00000380746 PLOD2O00469 737 aa10.83□□□□□ -0.68
DNMT3A-203ENST00000380746 NME4O00746 187 aa10.83□□□□□ -0.68
DNMT3A-203ENST00000380746 CCL16O15467 120 aa10.83□□□□□ -0.68
DNMT3A-203ENST00000380746 BCAS2O75934 225 aaPredicted RBP10.83□□□□□ -0.68
DNMT3A-203ENST00000380746 PEX11BO96011 259 aa10.83□□□□□ -0.68
DNMT3A-203ENST00000380746 IGLV3-25P01717 112 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms