RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 RHOT2Q8IXI1 618 aa16.61■□□□□ 0.25
SMN2-201ENST00000380741 UNC5BQ8IZJ1 945 aa16.61■□□□□ 0.25
SMN2-201ENST00000380741 KIAA1143Q96AT1 154 aaPredicted RBP16.61■□□□□ 0.25
SMN2-201ENST00000380741 TIMM29Q9BSF4 260 aa16.61■□□□□ 0.25
SMN2-201ENST00000380741 NHEJ1Q9H9Q4 299 aaPredicted RBP16.61■□□□□ 0.25
SMN2-201ENST00000380741 UCK1Q9HA47 277 aa16.61■□□□□ 0.25
SMN2-201ENST00000380741 SIDT1Q9NXL6 827 aaKnown RBP16.61■□□□□ 0.25
SMN2-201ENST00000380741 ZNF624Q9P2J8 865 aaPredicted RBP16.61■□□□□ 0.25
SMN2-201ENST00000380741 IL17BQ9UHF5 180 aa16.61■□□□□ 0.25
SMN2-201ENST00000380741 HYOU1Q9Y4L1 999 aa16.61■□□□□ 0.25
SMN2-201ENST00000380741 TMEM184BQ9Y519 407 aaPredicted RBP16.61■□□□□ 0.25
SMN2-201ENST00000380741 SLC30A1Q9Y6M5 507 aa16.61■□□□□ 0.25
SMN2-201ENST00000380741 A0A0A6YYK5 440 aaPredicted RBP16.6■□□□□ 0.25
SMN2-201ENST00000380741 PRR19A6NJB7 356 aa16.6■□□□□ 0.25
SMN2-201ENST00000380741 PDZK1P1A8MUH7 402 aa16.6■□□□□ 0.25
SMN2-201ENST00000380741 CBFA2T2O43439 604 aa16.6■□□□□ 0.25
SMN2-201ENST00000380741 UBXN7O94888 489 aa16.6■□□□□ 0.25
SMN2-201ENST00000380741 NDST3O95803 873 aa16.6■□□□□ 0.25
SMN2-201ENST00000380741 DLGAP3O95886 979 aa16.6■□□□□ 0.25
SMN2-201ENST00000380741 VIPP01282 170 aa16.6■□□□□ 0.25
SMN2-201ENST00000380741 C9P02748 559 aa16.6■□□□□ 0.25
SMN2-201ENST00000380741 TYRP1P17643 537 aa16.6■□□□□ 0.25
SMN2-201ENST00000380741 SLC19A1P41440 591 aa16.6■□□□□ 0.25
SMN2-201ENST00000380741 KCNAB2Q13303 367 aa16.6■□□□□ 0.25
SMN2-201ENST00000380741 PRKD1Q15139 912 aaPredicted RBP16.6■□□□□ 0.25
SMN2-201ENST00000380741 ODF2Q5BJF6 829 aa16.6■□□□□ 0.25
SMN2-201ENST00000380741 CCDC70Q6NSX1 233 aa16.6■□□□□ 0.25
SMN2-201ENST00000380741 MFSD7Q6UXD7 560 aa16.6■□□□□ 0.25
SMN2-201ENST00000380741 TRIM48Q8IWZ4 208 aa16.6■□□□□ 0.25
SMN2-201ENST00000380741 RHOT1Q8IXI2 618 aa16.6■□□□□ 0.25
SMN2-201ENST00000380741 C9orf72Q96LT7 481 aa16.6■□□□□ 0.25
SMN2-201ENST00000380741 TEKT5Q96M29 485 aa16.6■□□□□ 0.25
SMN2-201ENST00000380741 CCDC42Q96M95 316 aa16.6■□□□□ 0.25
SMN2-201ENST00000380741 CATSPER2Q96P56 530 aa16.6■□□□□ 0.25
SMN2-201ENST00000380741 BPIFA1Q9NP55 256 aa16.6■□□□□ 0.25
SMN2-201ENST00000380741 UBP1Q9NZI7 540 aa16.6■□□□□ 0.25
SMN2-201ENST00000380741 SAE1Q9UBE0 346 aaPredicted RBP16.6■□□□□ 0.25
SMN2-201ENST00000380741 TMPRSS11EQ9UL52 423 aa16.6■□□□□ 0.25
SMN2-201ENST00000380741 RELNP78509 3460 aa16.6■□□□□ 0.25
SMN2-201ENST00000380741 VEGFDO43915 354 aa16.59■□□□□ 0.25
SMN2-201ENST00000380741 MFAP3LO75121 409 aa16.59■□□□□ 0.25
SMN2-201ENST00000380741 CDK14O94921 469 aa16.59■□□□□ 0.25
SMN2-201ENST00000380741 PRKAR1AP10644 381 aa16.59■□□□□ 0.25
SMN2-201ENST00000380741 BRAFP15056 766 aa16.59■□□□□ 0.25
SMN2-201ENST00000380741 RPL10P27635 214 aaKnown RBP16.59■□□□□ 0.25
SMN2-201ENST00000380741 CD68P34810 354 aaPredicted RBP16.59■□□□□ 0.25
SMN2-201ENST00000380741 CCR10P46092 362 aa16.59■□□□□ 0.25
SMN2-201ENST00000380741 ABHD18Q0P651 414 aa16.59■□□□□ 0.25
SMN2-201ENST00000380741 NOMO1Q15155 1222 aa16.59■□□□□ 0.25
SMN2-201ENST00000380741 ATP13A5Q4VNC0 1218 aa16.59■□□□□ 0.25
SMN2-201ENST00000380741 VSTM4Q8IW00 320 aa16.59■□□□□ 0.25
SMN2-201ENST00000380741 TGM7Q96PF1 710 aa16.59■□□□□ 0.25
SMN2-201ENST00000380741 VPS35Q96QK1 796 aa16.59■□□□□ 0.25
SMN2-201ENST00000380741 DDX56Q9NY93 547 aaKnown RBP16.59■□□□□ 0.25
SMN2-201ENST00000380741 OR52A4PA6NMU1 304 aa16.58■□□□□ 0.24
SMN2-201ENST00000380741 SPOPO43791 374 aa16.58■□□□□ 0.24
SMN2-201ENST00000380741 TPM1P09493 284 aa16.58■□□□□ 0.24
SMN2-201ENST00000380741 PECAM1P16284 738 aaPredicted RBP16.58■□□□□ 0.24
SMN2-201ENST00000380741 AMD1P17707 334 aa16.58■□□□□ 0.24
SMN2-201ENST00000380741 COMTP21964 271 aa16.58■□□□□ 0.24
SMN2-201ENST00000380741 HMGCLP35914 325 aa16.58■□□□□ 0.24
SMN2-201ENST00000380741 CDKN2BP42772 138 aa16.58■□□□□ 0.24
SMN2-201ENST00000380741 SLC1A1P43005 524 aa16.58■□□□□ 0.24
SMN2-201ENST00000380741 LEPRP48357 1165 aaKnown RBP16.58■□□□□ 0.24
SMN2-201ENST00000380741 NR2C2P49116 596 aa16.58■□□□□ 0.24
SMN2-201ENST00000380741 SEPHS1P49903 392 aa16.58■□□□□ 0.24
SMN2-201ENST00000380741 DRG2P55039 364 aaKnown RBP16.58■□□□□ 0.24
SMN2-201ENST00000380741 FOXM1Q08050 763 aa16.58■□□□□ 0.24
SMN2-201ENST00000380741 WASHC5Q12768 1159 aa16.58■□□□□ 0.24
SMN2-201ENST00000380741 CDC20Q12834 499 aa16.58■□□□□ 0.24
SMN2-201ENST00000380741 LLGL1Q15334 1064 aa16.58■□□□□ 0.24
SMN2-201ENST00000380741 TAZQ16635 292 aa16.58■□□□□ 0.24
SMN2-201ENST00000380741 ABRAXAS1Q6UWZ7 409 aa16.58■□□□□ 0.24
SMN2-201ENST00000380741 C11orf96Q7Z7L8 435 aa16.58■□□□□ 0.24
SMN2-201ENST00000380741 PTRH1Q86Y79 214 aaKnown RBP16.58■□□□□ 0.24
SMN2-201ENST00000380741 TRAPPC5Q8IUR0 188 aa16.58■□□□□ 0.24
SMN2-201ENST00000380741 TFB1MQ8WVM0 346 aaKnown RBP16.58■□□□□ 0.24
SMN2-201ENST00000380741 STARD8Q92502 1023 aa16.58■□□□□ 0.24
SMN2-201ENST00000380741 RSC1A1Q92681 617 aa16.58■□□□□ 0.24
SMN2-201ENST00000380741 RNF31Q96EP0 1072 aa16.58■□□□□ 0.24
SMN2-201ENST00000380741 SRPK1Q96SB4 655 aaKnown RBP16.58■□□□□ 0.24
SMN2-201ENST00000380741 EFHD1Q9BUP0 239 aa16.58■□□□□ 0.24
SMN2-201ENST00000380741 TRIT1Q9H3H1 467 aaKnown RBP16.58■□□□□ 0.24
SMN2-201ENST00000380741 POT1Q9NUX5 634 aa16.58■□□□□ 0.24
SMN2-201ENST00000380741 TUBD1Q9UJT1 453 aa16.58■□□□□ 0.24
SMN2-201ENST00000380741 PTPN13Q12923 2485 aa16.57■□□□□ 0.24
SMN2-201ENST00000380741 CST8O60676 142 aa16.57■□□□□ 0.24
SMN2-201ENST00000380741 NFKB1P19838 968 aa16.57■□□□□ 0.24
SMN2-201ENST00000380741 IDSP22304 550 aa16.57■□□□□ 0.24
SMN2-201ENST00000380741 OAS2P29728 719 aaKnown RBP16.57■□□□□ 0.24
SMN2-201ENST00000380741 STAT5AP42229 794 aa16.57■□□□□ 0.24
SMN2-201ENST00000380741 CAPZBP47756 277 aa16.57■□□□□ 0.24
SMN2-201ENST00000380741 WNT3AP56704 352 aa16.57■□□□□ 0.24
SMN2-201ENST00000380741 SH3BP2P78314 561 aa16.57■□□□□ 0.24
SMN2-201ENST00000380741 TMEM115Q12893 351 aaPredicted RBP16.57■□□□□ 0.24
SMN2-201ENST00000380741 TFDP2Q14188 446 aa16.57■□□□□ 0.24
SMN2-201ENST00000380741 GPR18Q14330 331 aa16.57■□□□□ 0.24
SMN2-201ENST00000380741 AGAP9Q5VTM2 703 aa16.57■□□□□ 0.24
SMN2-201ENST00000380741 KDELC1Q6UW63 502 aa16.57■□□□□ 0.24
SMN2-201ENST00000380741 WASH2PQ6VEQ5 465 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms