RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 TEPSINQ96N21 525 aa6.53□□□□□ -1.36
RIPK1-202ENST00000380409 SIGLEC11Q96RL6 698 aa6.53□□□□□ -1.36
RIPK1-202ENST00000380409 GTPBP2Q9BX10 602 aaKnown RBP6.53□□□□□ -1.36
RIPK1-202ENST00000380409 SPNS1Q9H2V7 528 aa6.53□□□□□ -1.36
RIPK1-202ENST00000380409 MMP27Q9H306 513 aa6.53□□□□□ -1.36
RIPK1-202ENST00000380409 SMOC2Q9H3U7 446 aa6.53□□□□□ -1.36
RIPK1-202ENST00000380409 BCAS3Q9H6U6 928 aa6.53□□□□□ -1.36
RIPK1-202ENST00000380409 HEXA-AS1Q9H8Q6 139 aa6.53□□□□□ -1.36
RIPK1-202ENST00000380409 IFT46Q9NQC8 304 aa6.53□□□□□ -1.36
RIPK1-202ENST00000380409 NYAP2Q9P242 653 aa6.53□□□□□ -1.36
RIPK1-202ENST00000380409 ABCD2Q9UBJ2 740 aa6.53□□□□□ -1.36
RIPK1-202ENST00000380409 TRMT6Q9UJA5 497 aaKnown RBP6.53□□□□□ -1.36
RIPK1-202ENST00000380409 KLHL21Q9UJP4 597 aa6.53□□□□□ -1.36
RIPK1-202ENST00000380409 ACTL7AQ9Y615 435 aa6.53□□□□□ -1.36
RIPK1-202ENST00000380409 PSAT1Q9Y617 370 aa6.53□□□□□ -1.36
RIPK1-202ENST00000380409 TCRBV5S2A0A599 114 aa6.52□□□□□ -1.36
RIPK1-202ENST00000380409 FAM159BA6NKW6 160 aa6.52□□□□□ -1.36
RIPK1-202ENST00000380409 BTN3A1O00481 513 aa6.52□□□□□ -1.36
RIPK1-202ENST00000380409 ABCD4O14678 606 aa6.52□□□□□ -1.36
RIPK1-202ENST00000380409 TRDMT1O14717 391 aaKnown RBP6.52□□□□□ -1.36
RIPK1-202ENST00000380409 CFLARO15519 480 aa6.52□□□□□ -1.36
RIPK1-202ENST00000380409 PRPSAP2O60256 369 aa6.52□□□□□ -1.36
RIPK1-202ENST00000380409 SEC24AO95486 1093 aa6.52□□□□□ -1.36
RIPK1-202ENST00000380409 TP53P04637 393 aaPredicted RBP6.52□□□□□ -1.36
RIPK1-202ENST00000380409 NR3C2P08235 984 aa6.52□□□□□ -1.36
RIPK1-202ENST00000380409 CSH1P0DML2 217 aa6.52□□□□□ -1.36
RIPK1-202ENST00000380409 CSH2P0DML3 217 aa6.52□□□□□ -1.36
RIPK1-202ENST00000380409 SFTPCP11686 197 aa6.52□□□□□ -1.36
RIPK1-202ENST00000380409 PSMA3P25788 255 aa6.52□□□□□ -1.36
RIPK1-202ENST00000380409 NUBP1P53384 320 aa6.52□□□□□ -1.36
RIPK1-202ENST00000380409 MAPK12P53778 367 aa6.52□□□□□ -1.36
RIPK1-202ENST00000380409 RBP5P82980 135 aa6.52□□□□□ -1.36
RIPK1-202ENST00000380409 FPGSQ05932 587 aa6.52□□□□□ -1.36
RIPK1-202ENST00000380409 DGKZQ13574 1117 aa6.52□□□□□ -1.36
RIPK1-202ENST00000380409 IRF3Q14653 427 aa6.52□□□□□ -1.36
RIPK1-202ENST00000380409 POLD3Q15054 466 aaPredicted RBP6.52□□□□□ -1.36
RIPK1-202ENST00000380409 ZNF124Q15973 351 aa6.52□□□□□ -1.36
RIPK1-202ENST00000380409 ZNF699Q32M78 642 aa6.52□□□□□ -1.36
RIPK1-202ENST00000380409 ARMC4Q5T2S8 1044 aa6.52□□□□□ -1.36
RIPK1-202ENST00000380409 STRIP1Q5VSL9 837 aa6.52□□□□□ -1.36
RIPK1-202ENST00000380409 ACAD10Q6JQN1 1059 aa6.52□□□□□ -1.36
RIPK1-202ENST00000380409 PLEKHM3Q6ZWE6 761 aa6.52□□□□□ -1.36
RIPK1-202ENST00000380409 CHDHQ8NE62 594 aaPredicted RBP6.52□□□□□ -1.36
RIPK1-202ENST00000380409 NSUN6Q8TEA1 469 aaKnown RBP6.52□□□□□ -1.36
RIPK1-202ENST00000380409 KCTD4Q8WVF5 259 aa6.52□□□□□ -1.36
RIPK1-202ENST00000380409 ISL2Q96A47 359 aa6.52□□□□□ -1.36
RIPK1-202ENST00000380409 DACT3Q96B18 629 aaPredicted RBP6.52□□□□□ -1.36
RIPK1-202ENST00000380409 PPP1R36Q96LQ0 422 aa6.52□□□□□ -1.36
RIPK1-202ENST00000380409 MYRFLQ96LU7 910 aa6.52□□□□□ -1.36
RIPK1-202ENST00000380409 NIFKQ9BYG3 293 aaKnown RBP6.52□□□□□ -1.36
RIPK1-202ENST00000380409 RIOX1Q9H6W3 641 aa6.52□□□□□ -1.36
RIPK1-202ENST00000380409 RNF19AQ9NV58 838 aa6.52□□□□□ -1.36
RIPK1-202ENST00000380409 POLR3BQ9NW08 1133 aaPredicted RBP6.52□□□□□ -1.36
RIPK1-202ENST00000380409 PIH1D1Q9NWS0 290 aaKnown RBP6.52□□□□□ -1.36
RIPK1-202ENST00000380409 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.52□□□□□ -1.36
RIPK1-202ENST00000380409 ZNF70Q9UC06 446 aaPredicted RBP6.52□□□□□ -1.36
RIPK1-202ENST00000380409 STOML2Q9UJZ1 356 aa6.52□□□□□ -1.36
RIPK1-202ENST00000380409 TMEM5Q9Y2B1 443 aa6.52□□□□□ -1.36
RIPK1-202ENST00000380409 MFHAS1Q9Y4C4 1052 aa6.52□□□□□ -1.36
RIPK1-202ENST00000380409 F8W810 466 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 EI24O14681 340 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 PLD2O14939 933 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 SLC22A5O76082 557 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 SNAP29O95721 258 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 AHSGP02765 367 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 NCF2P19878 526 aaPredicted RBP6.52□□□□□ -1.37
RIPK1-202ENST00000380409 ELK3P41970 407 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 TPMTP51580 245 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 GBX2P52951 348 aaPredicted RBP6.52□□□□□ -1.37
RIPK1-202ENST00000380409 SCRN3Q0VDG4 424 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 SEMA5AQ13591 1074 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 PON2Q15165 354 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 TAF12Q16514 161 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 CTU2Q2VPK5 515 aaKnown RBP6.52□□□□□ -1.37
RIPK1-202ENST00000380409 FAM160B1Q5W0V3 765 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 FAM45BPQ6NSW5 357 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 CES5AQ6NT32 575 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 UTS2BQ765I0 119 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 CEP68Q76N32 757 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 KDELC2Q7Z4H8 507 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 SLC47A2Q86VL8 602 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 CCDC103Q8IW40 242 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 MICU2Q8IYU8 434 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 KDM1BQ8NB78 822 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 OR10T2Q8NGX3 314 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 FAM45AQ8TCE6 357 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 CANT1Q8WVQ1 401 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 DEDD2Q8WXF8 326 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 SHC3Q92529 594 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 FAF2Q96CS3 445 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 CENPNQ96H22 339 aaPredicted RBP6.52□□□□□ -1.37
RIPK1-202ENST00000380409 PDLIM5Q96HC4 596 aaKnown RBP6.52□□□□□ -1.37
RIPK1-202ENST00000380409 BCL2L14Q9BZR8 327 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 RPF1Q9H9Y2 349 aaKnown RBP6.52□□□□□ -1.37
RIPK1-202ENST00000380409 MRM3Q9HC36 420 aaKnown RBP6.52□□□□□ -1.37
RIPK1-202ENST00000380409 REV1Q9UBZ9 1251 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 FEM1BQ9UK73 627 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 NUDT5Q9UKK9 219 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 OAZ3Q9UMX2 235 aa6.52□□□□□ -1.37
RIPK1-202ENST00000380409 PCDHGB2Q9Y5G2 931 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms