RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 USP45Q70EL2 814 aa19.25■□□□□ 0.67
SSU72-204ENST00000378726 GET4Q7L5D6 327 aaPredicted RBP19.25■□□□□ 0.67
SSU72-204ENST00000378726 C12orf40Q86WS4 652 aa19.25■□□□□ 0.67
SSU72-204ENST00000378726 DEFB107AQ8IZN7 70 aa19.25■□□□□ 0.67
SSU72-204ENST00000378726 LSMEM2Q8N112 164 aa19.25■□□□□ 0.67
SSU72-204ENST00000378726 STK40Q8N2I9 435 aa19.25■□□□□ 0.67
SSU72-204ENST00000378726 PHF21BQ96EK2 531 aa19.25■□□□□ 0.67
SSU72-204ENST00000378726 CDCA3Q99618 268 aaPredicted RBP19.25■□□□□ 0.67
SSU72-204ENST00000378726 HEPHQ9BQS7 1158 aa19.25■□□□□ 0.67
SSU72-204ENST00000378726 BRD9Q9H8M2 597 aa19.25■□□□□ 0.67
SSU72-204ENST00000378726 NIPSNAP2O75323 286 aa19.24■□□□□ 0.67
SSU72-204ENST00000378726 TULP3O75386 442 aa19.24■□□□□ 0.67
SSU72-204ENST00000378726 VPS26AO75436 327 aa19.24■□□□□ 0.67
SSU72-204ENST00000378726 RPL14P50914 215 aaKnown RBP19.24■□□□□ 0.67
SSU72-204ENST00000378726 ADARP55265 1226 aaKnown RBP19.24■□□□□ 0.67
SSU72-204ENST00000378726 POLR2LP62875 67 aaKnown RBP19.24■□□□□ 0.67
SSU72-204ENST00000378726 RAB30Q15771 203 aa19.24■□□□□ 0.67
SSU72-204ENST00000378726 TCHHL1Q5QJ38 904 aaPredicted RBP19.24■□□□□ 0.67
SSU72-204ENST00000378726 GRAMD4Q6IC98 578 aa19.24■□□□□ 0.67
SSU72-204ENST00000378726 PIWIL4Q7Z3Z4 852 aaKnown RBP19.24■□□□□ 0.67
SSU72-204ENST00000378726 SNX20Q7Z614 316 aa19.24■□□□□ 0.67
SSU72-204ENST00000378726 SERPINA9Q86WD7 417 aa19.24■□□□□ 0.67
SSU72-204ENST00000378726 HPS6Q86YV9 775 aa19.24■□□□□ 0.67
SSU72-204ENST00000378726 CBARPQ8N350 705 aaPredicted RBP19.24■□□□□ 0.67
SSU72-204ENST00000378726 GRIN3AQ8TCU5 1115 aa19.24■□□□□ 0.67
SSU72-204ENST00000378726 COG4Q9H9E3 785 aa19.24■□□□□ 0.67
SSU72-204ENST00000378726 DZANK1Q9NVP4 752 aa19.24■□□□□ 0.67
SSU72-204ENST00000378726 ZDHHC2Q9UIJ5 367 aa19.24■□□□□ 0.67
SSU72-204ENST00000378726 SLC8A2Q9UPR5 921 aa19.24■□□□□ 0.67
SSU72-204ENST00000378726 POMPQ9Y244 141 aa19.24■□□□□ 0.67
SSU72-204ENST00000378726 GLYATL1P3A0A0U1RQE8 302 aa19.24■□□□□ 0.67
SSU72-204ENST00000378726 A0A1W2PQ67 120 aa19.24■□□□□ 0.67
SSU72-204ENST00000378726 HEPACAM2A8MVW5 462 aa19.24■□□□□ 0.67
SSU72-204ENST00000378726 H3BMM5 538 aa19.24■□□□□ 0.67
SSU72-204ENST00000378726 NPHS1O60500 1241 aa19.24■□□□□ 0.67
SSU72-204ENST00000378726 ESR1P03372 595 aa19.24■□□□□ 0.67
SSU72-204ENST00000378726 UGT1A6P19224 532 aa19.24■□□□□ 0.67
SSU72-204ENST00000378726 UGT1A1P22309 533 aa19.24■□□□□ 0.67
SSU72-204ENST00000378726 UGT1A4P22310 534 aa19.24■□□□□ 0.67
SSU72-204ENST00000378726 MPSTP25325 297 aa19.24■□□□□ 0.67
SSU72-204ENST00000378726 PEX2P28328 305 aa19.24■□□□□ 0.67
SSU72-204ENST00000378726 CA5AP35218 305 aa19.24■□□□□ 0.67
SSU72-204ENST00000378726 UGT1A3P35503 534 aa19.24■□□□□ 0.67
SSU72-204ENST00000378726 UGT1A5P35504 534 aa19.24■□□□□ 0.67
SSU72-204ENST00000378726 PPARGP37231 505 aaPredicted RBP19.24■□□□□ 0.67
SSU72-204ENST00000378726 AQP4P55087 323 aa19.24■□□□□ 0.67
SSU72-204ENST00000378726 PTSQ03393 145 aa19.24■□□□□ 0.67
SSU72-204ENST00000378726 PRKAA1Q13131 559 aa19.24■□□□□ 0.67
SSU72-204ENST00000378726 NFATC2Q13469 925 aa19.24■□□□□ 0.67
SSU72-204ENST00000378726 CUL3Q13618 768 aa19.24■□□□□ 0.67
SSU72-204ENST00000378726 CNPY1Q3B7I2 92 aa19.24■□□□□ 0.67
SSU72-204ENST00000378726 LRRC66Q68CR7 880 aa19.24■□□□□ 0.67
SSU72-204ENST00000378726 ACAD11Q709F0 780 aa19.24■□□□□ 0.67
SSU72-204ENST00000378726 GPR149Q86SP6 731 aa19.24■□□□□ 0.67
SSU72-204ENST00000378726 CNDP1Q96KN2 507 aa19.24■□□□□ 0.67
SSU72-204ENST00000378726 MCCC1Q96RQ3 725 aaPredicted RBP19.24■□□□□ 0.67
SSU72-204ENST00000378726 OAS3Q9Y6K5 1087 aaKnown RBP19.24■□□□□ 0.67
SSU72-204ENST00000378726 PRMT5O14744 637 aaPredicted RBP19.23■□□□□ 0.67
SSU72-204ENST00000378726 RPS6KA3P51812 740 aa19.23■□□□□ 0.67
SSU72-204ENST00000378726 CHRNA6Q15825 494 aa19.23■□□□□ 0.67
SSU72-204ENST00000378726 SLC22A9Q8IVM8 553 aa19.23■□□□□ 0.67
SSU72-204ENST00000378726 CMTM5Q96DZ9 223 aa19.23■□□□□ 0.67
SSU72-204ENST00000378726 SLC30A3Q99726 388 aa19.23■□□□□ 0.67
SSU72-204ENST00000378726 KLHL4Q9C0H6 718 aa19.23■□□□□ 0.67
SSU72-204ENST00000378726 P2RY12Q9H244 342 aa19.23■□□□□ 0.67
SSU72-204ENST00000378726 MTG2Q9H4K7 406 aa19.23■□□□□ 0.67
SSU72-204ENST00000378726 TFB2MQ9H5Q4 396 aaKnown RBP19.23■□□□□ 0.67
SSU72-204ENST00000378726 GDE1Q9NZC3 331 aa19.23■□□□□ 0.67
SSU72-204ENST00000378726 COMMD10Q9Y6G5 202 aa19.23■□□□□ 0.67
SSU72-204ENST00000378726 C5orf42Q9H799 3197 aa19.23■□□□□ 0.67
SSU72-204ENST00000378726 OTOL1A6NHN0 477 aaPredicted RBP19.23■□□□□ 0.67
SSU72-204ENST00000378726 GOLGA8CPA6NN73 597 aa19.23■□□□□ 0.67
SSU72-204ENST00000378726 E5RI56 91 aa19.23■□□□□ 0.67
SSU72-204ENST00000378726 DCXO43602 365 aa19.23■□□□□ 0.67
SSU72-204ENST00000378726 NFATC1O95644 943 aa19.23■□□□□ 0.67
SSU72-204ENST00000378726 SRPRAP08240 638 aaKnown RBP19.23■□□□□ 0.67
SSU72-204ENST00000378726 ZNF7P17097 686 aaPredicted RBP19.23■□□□□ 0.67
SSU72-204ENST00000378726 ITGALP20701 1170 aa19.23■□□□□ 0.67
SSU72-204ENST00000378726 CD9P21926 228 aa19.23■□□□□ 0.67
SSU72-204ENST00000378726 GSTT1P30711 240 aa19.23■□□□□ 0.67
SSU72-204ENST00000378726 SPAM1P38567 509 aa19.23■□□□□ 0.67
SSU72-204ENST00000378726 SLC6A11P48066 632 aa19.23■□□□□ 0.67
SSU72-204ENST00000378726 OR4D1Q15615 310 aa19.23■□□□□ 0.67
SSU72-204ENST00000378726 ARSIQ5FYB1 569 aa19.23■□□□□ 0.67
SSU72-204ENST00000378726 EPGNQ6UW88 154 aa19.23■□□□□ 0.67
SSU72-204ENST00000378726 NKAPQ8N5F7 415 aaKnown RBP19.23■□□□□ 0.67
SSU72-204ENST00000378726 SIDT2Q8NBJ9 832 aaKnown RBP19.23■□□□□ 0.67
SSU72-204ENST00000378726 GPR26Q8NDV2 337 aa19.23■□□□□ 0.67
SSU72-204ENST00000378726 RHEBL1Q8TAI7 183 aa19.23■□□□□ 0.67
SSU72-204ENST00000378726 DERL2Q9GZP9 239 aa19.23■□□□□ 0.67
SSU72-204ENST00000378726 TRMT6Q9UJA5 497 aaKnown RBP19.23■□□□□ 0.67
SSU72-204ENST00000378726 SLC27A6Q9Y2P4 619 aa19.23■□□□□ 0.67
SSU72-204ENST00000378726 IQCF5A8MTL0 148 aa19.22■□□□□ 0.67
SSU72-204ENST00000378726 LEFTY1O75610 366 aa19.22■□□□□ 0.67
SSU72-204ENST00000378726 UQCRBP14927 111 aa19.22■□□□□ 0.67
SSU72-204ENST00000378726 CD1EP15812 388 aa19.22■□□□□ 0.67
SSU72-204ENST00000378726 IMPDH1P20839 514 aa19.22■□□□□ 0.67
SSU72-204ENST00000378726 TBL3Q12788 808 aaKnown RBP19.22■□□□□ 0.67
SSU72-204ENST00000378726 LIN52Q52LA3 116 aa19.22■□□□□ 0.67
SSU72-204ENST00000378726 LRRC73Q5JTD7 316 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms