RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 MAGEB16A2A368 324 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 KPNA7A9QM74 516 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 UPK1AO00322 258 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 GPC4O75487 556 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 KRT75O95678 551 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 NDST3O95803 873 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 PGAM1P18669 254 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 PKLRP30613 574 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 RFC2P35250 354 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 ALDH9A1P49189 494 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 LIMK2P53671 638 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 KCNQ4P56696 695 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 TUBA1BP68363 451 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 DMPKQ09013 629 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 LRRC74AQ0VAA2 488 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 GRAPQ13588 217 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 DNASE1L3Q13609 305 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 SQLEQ14534 574 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 NPTX1Q15818 432 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 GEN1Q17RS7 908 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 MPEG1Q2M385 716 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 PTPN20Q4JDL3 420 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 PPM1JQ5JR12 505 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 LIN54Q6MZP7 749 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 TMEM270Q6UE05 265 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 FIP1L1Q6UN15 594 aaKnown RBP6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 TUBA1AQ71U36 451 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 SLC22A16Q86VW1 577 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 XYLT1Q86Y38 959 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 GRAMD2AQ8IUY3 354 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 SFRP1Q8N474 314 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 RNF148Q8N7C7 305 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 IL17RDQ8NFM7 739 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 GRAPLQ8TC17 118 aaPredicted RBP6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 SLC22A17Q8WUG5 538 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 AFG1LQ8WV93 481 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 BSNDQ8WZ55 320 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 HERVK_113Q902F9 699 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 ZNF300Q96RE9 604 aaPredicted RBP6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 ZNF577Q9BSK1 485 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 CNPPD1Q9BV87 410 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 HAPLN2Q9GZV7 340 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 MARCH7Q9H992 704 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 LAMP5Q9UJQ1 280 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 CDYLQ9Y232 598 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 ATP11BQ9Y2G3 1177 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 COL4A4P53420 1690 aaPredicted RBP6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 DOCK1Q14185 1865 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 ZNF236Q9UL36 1845 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 LCHNA4D1U4 455 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 KCNU1A8MYU2 1149 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 TAF4O00268 1085 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 VWA5AO00534 786 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 NRP1O14786 923 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 AURKAO14965 403 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 NPHS1O60500 1241 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 NOL3O60936 208 aaKnown RBP6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 USP2O75604 605 aaPredicted RBP6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 KCNH1O95259 989 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 GPIP06744 558 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 CTRB1P17538 263 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 TCN1P20061 433 aaPredicted RBP6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 NR4A1P22736 598 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 ATP5F1P24539 256 aaPredicted RBP6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 MIPP30301 263 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 CA8P35219 290 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 ETV6P41212 452 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 NR4A2P43354 598 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 STX5Q13190 355 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 MMRN1Q13201 1228 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 SMTNL2Q2TAL5 461 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 PGS1Q32NB8 556 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 WDR44Q5JSH3 913 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 KCNT1Q5JUK3 1230 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 VARS2Q5ST30 1063 aaKnown RBP6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 TMEM198Q66K66 360 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 SLFN13Q68D06 897 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 CTRB2Q6GPI1 263 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 ZNF598Q86UK7 904 aaKnown RBP6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 DHFR2Q86XF0 187 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 RIMKLAQ8IXN7 391 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 SLC38A6Q8IZM9 456 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 MINDY1Q8N5J2 469 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 BEND7Q8N7W2 519 aaPredicted RBP6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 KDF1Q8NAX2 398 aaPredicted RBP6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 TMEM35BQ8NCS4 154 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 FLAD1Q8NFF5 587 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 RDH12Q96NR8 316 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 MXRA8Q9BRK3 442 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 MRIQ9BWK5 157 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 MTMR12Q9C0I1 747 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 C2orf40Q9H1Z8 148 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 LRRC40Q9H9A6 602 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 CCDC177Q9NQR7 707 aaPredicted RBP6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 C20orf96Q9NUD7 363 aaPredicted RBP6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 ACTR3BQ9P1U1 418 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 SH3BGRL2Q9UJC5 107 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 ANGPTL3Q9Y5C1 460 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 PCDHB4Q9Y5E5 795 aa6.63□□□□□ -1.35
CDKAL1-202ENST00000378610 MAU2Q9Y6X3 613 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms