RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 CDK16Q00536 496 aa13.65□□□□□ -0.22
PRPF18-202ENST00000378572 ITKQ08881 620 aa13.65□□□□□ -0.22
PRPF18-202ENST00000378572 TGIF1Q15583 401 aa13.65□□□□□ -0.22
PRPF18-202ENST00000378572 CNGA3Q16281 694 aa13.65□□□□□ -0.22
PRPF18-202ENST00000378572 MARC1Q5VT66 337 aa13.65□□□□□ -0.22
PRPF18-202ENST00000378572 CNTD1Q8N815 330 aa13.65□□□□□ -0.22
PRPF18-202ENST00000378572 TTC9Q92623 222 aa13.65□□□□□ -0.22
PRPF18-202ENST00000378572 CMKLR1Q99788 373 aa13.65□□□□□ -0.22
PRPF18-202ENST00000378572 EIF2B3Q9NR50 452 aaKnown RBP13.65□□□□□ -0.22
PRPF18-202ENST00000378572 HAUS2Q9NVX0 235 aa13.65□□□□□ -0.22
PRPF18-202ENST00000378572 PCDHGA7Q9Y5G6 932 aa13.65□□□□□ -0.22
PRPF18-202ENST00000378572 ATMQ13315 3056 aa13.65□□□□□ -0.22
PRPF18-202ENST00000378572 A0A1W2PQ67 120 aa13.64□□□□□ -0.23
PRPF18-202ENST00000378572 ERI2A8K979 691 aaKnown RBP13.64□□□□□ -0.23
PRPF18-202ENST00000378572 TRAFD1O14545 582 aaPredicted RBP13.64□□□□□ -0.23
PRPF18-202ENST00000378572 NOBOXO60393 691 aa13.64□□□□□ -0.23
PRPF18-202ENST00000378572 SOCS5O75159 536 aa13.64□□□□□ -0.23
PRPF18-202ENST00000378572 ALDH4A1P30038 563 aa13.64□□□□□ -0.23
PRPF18-202ENST00000378572 CD68P34810 354 aaPredicted RBP13.64□□□□□ -0.23
PRPF18-202ENST00000378572 HSPA9P38646 679 aaKnown RBP13.64□□□□□ -0.23
PRPF18-202ENST00000378572 ETV3P41162 512 aa13.64□□□□□ -0.23
PRPF18-202ENST00000378572 MAXP61244 160 aa13.64□□□□□ -0.23
PRPF18-202ENST00000378572 MANEAQ5SRI9 462 aa13.64□□□□□ -0.23
PRPF18-202ENST00000378572 SLC30A9Q6PML9 568 aa13.64□□□□□ -0.23
PRPF18-202ENST00000378572 PPP1R21Q6ZMI0 780 aa13.64□□□□□ -0.23
PRPF18-202ENST00000378572 PELI3Q8N2H9 469 aa13.64□□□□□ -0.23
PRPF18-202ENST00000378572 MREGQ8N565 214 aa13.64□□□□□ -0.23
PRPF18-202ENST00000378572 MCUQ8NE86 351 aa13.64□□□□□ -0.23
PRPF18-202ENST00000378572 ZDHHC1Q8WTX9 485 aa13.64□□□□□ -0.23
PRPF18-202ENST00000378572 CEP41Q9BYV8 373 aa13.64□□□□□ -0.23
PRPF18-202ENST00000378572 RBM22Q9NW64 420 aaKnown RBP eCLIP13.64□□□□□ -0.23
PRPF18-202ENST00000378572 APPL1Q9UKG1 709 aa13.64□□□□□ -0.23
PRPF18-202ENST00000378572 TTLL3Q9Y4R7 772 aa13.64□□□□□ -0.23
PRPF18-202ENST00000378572 PCDHB11Q9Y5F2 797 aa13.64□□□□□ -0.23
PRPF18-202ENST00000378572 CFAP46Q8IYW2 2715 aa13.64□□□□□ -0.23
PRPF18-202ENST00000378572 PRAMEF33A0A0G2JMD5 474 aa13.64□□□□□ -0.23
PRPF18-202ENST00000378572 ZW10O43264 779 aa13.64□□□□□ -0.23
PRPF18-202ENST00000378572 PRAMEF10O60809 474 aa13.64□□□□□ -0.23
PRPF18-202ENST00000378572 HLA-DQB2P05538 268 aa13.64□□□□□ -0.23
PRPF18-202ENST00000378572 LIPCP11150 499 aa13.64□□□□□ -0.23
PRPF18-202ENST00000378572 CTPS1P17812 591 aa13.64□□□□□ -0.23
PRPF18-202ENST00000378572 PSMB4P28070 264 aa13.64□□□□□ -0.23
PRPF18-202ENST00000378572 MMP13P45452 471 aa13.64□□□□□ -0.23
PRPF18-202ENST00000378572 ALG1LQ6GMV1 187 aa13.64□□□□□ -0.23
PRPF18-202ENST00000378572 USP45Q70EL2 814 aa13.64□□□□□ -0.23
PRPF18-202ENST00000378572 PRICKLE2Q7Z3G6 844 aa13.64□□□□□ -0.23
PRPF18-202ENST00000378572 VASH2Q86V25 355 aa13.64□□□□□ -0.23
PRPF18-202ENST00000378572 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.64□□□□□ -0.23
PRPF18-202ENST00000378572 MED8Q96G25 268 aa13.64□□□□□ -0.23
PRPF18-202ENST00000378572 COQ10AQ96MF6 247 aa13.64□□□□□ -0.23
PRPF18-202ENST00000378572 AGAP3Q96P47 875 aa13.64□□□□□ -0.23
PRPF18-202ENST00000378572 FCRL5Q96RD9 977 aa13.64□□□□□ -0.23
PRPF18-202ENST00000378572 NUDCD1Q96RS6 583 aa13.64□□□□□ -0.23
PRPF18-202ENST00000378572 RDH14Q9HBH5 336 aa13.64□□□□□ -0.23
PRPF18-202ENST00000378572 NOD2Q9HC29 1040 aa13.64□□□□□ -0.23
PRPF18-202ENST00000378572 GLOD4Q9HC38 313 aa13.64□□□□□ -0.23
PRPF18-202ENST00000378572 RSPH14Q9UHP6 348 aa13.64□□□□□ -0.23
PRPF18-202ENST00000378572 HEMK1Q9Y5R4 338 aaPredicted RBP13.64□□□□□ -0.23
PRPF18-202ENST00000378572 PYCARD-AS1I3L0S3 204 aa13.63□□□□□ -0.23
PRPF18-202ENST00000378572 EIF3HO15372 352 aaKnown RBP eCLIP13.63□□□□□ -0.23
PRPF18-202ENST00000378572 PSMD3O43242 534 aa13.63□□□□□ -0.23
PRPF18-202ENST00000378572 NUDT21O43809 227 aaKnown RBP13.63□□□□□ -0.23
PRPF18-202ENST00000378572 SLC28A2O43868 658 aa13.63□□□□□ -0.23
PRPF18-202ENST00000378572 PPFIA2O75334 1257 aa13.63□□□□□ -0.23
PRPF18-202ENST00000378572 TMEM63AO94886 807 aa13.63□□□□□ -0.23
PRPF18-202ENST00000378572 HOXC4P09017 264 aaPredicted RBP13.63□□□□□ -0.23
PRPF18-202ENST00000378572 FAM153BP0C7A2 387 aa13.63□□□□□ -0.23
PRPF18-202ENST00000378572 GM2AP17900 193 aa13.63□□□□□ -0.23
PRPF18-202ENST00000378572 NFKB1P19838 968 aa13.63□□□□□ -0.23
PRPF18-202ENST00000378572 OR1D5P58170 312 aa13.63□□□□□ -0.23
PRPF18-202ENST00000378572 TRAF2Q12933 501 aa13.63□□□□□ -0.23
PRPF18-202ENST00000378572 PRPSAP1Q14558 356 aa13.63□□□□□ -0.23
PRPF18-202ENST00000378572 SLMAPQ14BN4 828 aa13.63□□□□□ -0.23
PRPF18-202ENST00000378572 FAM153CQ494X1 144 aa13.63□□□□□ -0.23
PRPF18-202ENST00000378572 ARMC12Q5T9G4 340 aa13.63□□□□□ -0.23
PRPF18-202ENST00000378572 TMEM164Q5U3C3 297 aa13.63□□□□□ -0.23
PRPF18-202ENST00000378572 ANKRD22Q5VYY1 191 aa13.63□□□□□ -0.23
PRPF18-202ENST00000378572 OGFOD3Q6PK18 319 aa13.63□□□□□ -0.23
PRPF18-202ENST00000378572 HSD11B1LQ7Z5J1 315 aa13.63□□□□□ -0.23
PRPF18-202ENST00000378572 PIM3Q86V86 326 aa13.63□□□□□ -0.23
PRPF18-202ENST00000378572 RELL1Q8IUW5 271 aa13.63□□□□□ -0.23
PRPF18-202ENST00000378572 ZSCAN1Q8NBB4 408 aa13.63□□□□□ -0.23
PRPF18-202ENST00000378572 SNRNP27Q8WVK2 155 aaKnown RBP13.63□□□□□ -0.23
PRPF18-202ENST00000378572 USP7Q93009 1102 aa13.63□□□□□ -0.23
PRPF18-202ENST00000378572 TMEM159Q96B96 161 aa13.63□□□□□ -0.23
PRPF18-202ENST00000378572 DTD2Q96FN9 168 aa13.63□□□□□ -0.23
PRPF18-202ENST00000378572 TXLNGYQ9BZA5 131 aa13.63□□□□□ -0.23
PRPF18-202ENST00000378572 SLC25A51Q9H1U9 297 aa13.63□□□□□ -0.23
PRPF18-202ENST00000378572 NT5MQ9NPB1 228 aa13.63□□□□□ -0.23
PRPF18-202ENST00000378572 KCTD5Q9NXV2 234 aa13.63□□□□□ -0.23
PRPF18-202ENST00000378572 TAAR2Q9P1P5 351 aa13.63□□□□□ -0.23
PRPF18-202ENST00000378572 FAM153AQ9UHL3 310 aa13.63□□□□□ -0.23
PRPF18-202ENST00000378572 CD84Q9UIB8 345 aa13.63□□□□□ -0.23
PRPF18-202ENST00000378572 PHTF1Q9UMS5 762 aa13.63□□□□□ -0.23
PRPF18-202ENST00000378572 SUFUQ9UMX1 484 aa13.63□□□□□ -0.23
PRPF18-202ENST00000378572 E7EVH7 732 aa13.62□□□□□ -0.23
PRPF18-202ENST00000378572 CPNE6O95741 557 aa13.62□□□□□ -0.23
PRPF18-202ENST00000378572 APRTP07741 180 aa13.62□□□□□ -0.23
PRPF18-202ENST00000378572 PNLIPP16233 465 aa13.62□□□□□ -0.23
PRPF18-202ENST00000378572 AK4P27144 223 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms