RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 Q6ZNX1 250 aa13.1□□□□□ -0.31
ACTN1-202ENST00000376839 ZNF280BQ86YH2 543 aa13.1□□□□□ -0.31
ACTN1-202ENST00000376839 CDYL2Q8N8U2 506 aa13.1□□□□□ -0.31
ACTN1-202ENST00000376839 FNDC5Q8NAU1 212 aa13.1□□□□□ -0.31
ACTN1-202ENST00000376839 SIDT2Q8NBJ9 832 aaKnown RBP13.1□□□□□ -0.31
ACTN1-202ENST00000376839 OR52B6Q8NGF0 335 aa13.1□□□□□ -0.31
ACTN1-202ENST00000376839 TBC1D15Q8TC07 691 aa13.1□□□□□ -0.31
ACTN1-202ENST00000376839 TANKQ92844 425 aa13.1□□□□□ -0.31
ACTN1-202ENST00000376839 THAP11Q96EK4 314 aa13.1□□□□□ -0.31
ACTN1-202ENST00000376839 EXOC2Q96KP1 924 aa13.1□□□□□ -0.31
ACTN1-202ENST00000376839 NUSAP1Q9BXS6 441 aaKnown RBP13.1□□□□□ -0.31
ACTN1-202ENST00000376839 CCDC68Q9H2F9 335 aa13.1□□□□□ -0.31
ACTN1-202ENST00000376839 NTN4Q9HB63 628 aa13.1□□□□□ -0.31
ACTN1-202ENST00000376839 SCN10AQ9Y5Y9 1956 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 SLC12A8A0AV02 714 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 OR1I1O60431 355 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 NIPSNAP2O75323 286 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 NDST3O95803 873 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 TSPAN12O95859 305 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 SERPINF2P08697 491 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 UMPSP11172 480 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 HTR1EP28566 365 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 SHMT2P34897 504 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 MTPNP58546 118 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 ERVK-8P63133 956 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 EMX2Q04743 252 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 PDCD4Q53EL6 469 aaKnown RBP13.09□□□□□ -0.31
ACTN1-202ENST00000376839 C6orf136Q5SQH8 315 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 NADSYN1Q6IA69 706 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 PIANPQ8IYJ0 282 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 SMYD1Q8NB12 490 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 ATAD1Q8NBU5 361 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 TRPV1Q8NER1 839 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 ZNF420Q8TAQ5 688 aaPredicted RBP13.09□□□□□ -0.31
ACTN1-202ENST00000376839 BPIFB1Q8TDL5 484 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 OSCP1Q8WVF1 389 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 ISG20Q96AZ6 181 aaKnown RBP13.09□□□□□ -0.31
ACTN1-202ENST00000376839 PPM1MQ96MI6 270 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 MUS81Q96NY9 551 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 MTG1Q9BT17 334 aaPredicted RBP13.09□□□□□ -0.31
ACTN1-202ENST00000376839 PDFQ9HBH1 243 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 ZFYVE28Q9HCC9 887 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 C8orf4Q9NR00 106 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 NLE1Q9NVX2 485 aaPredicted RBP13.09□□□□□ -0.31
ACTN1-202ENST00000376839 MARCH2Q9P0N8 246 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 EVLQ9UI08 416 aaPredicted RBP13.09□□□□□ -0.31
ACTN1-202ENST00000376839 FNDC3AQ9Y2H6 1198 aaKnown RBP13.09□□□□□ -0.31
ACTN1-202ENST00000376839 SYCE1LA8MT33 242 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 UPK1AO00322 258 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 SYNCRIPO60506 623 aaKnown RBP13.09□□□□□ -0.31
ACTN1-202ENST00000376839 NDUFS3O75489 264 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 EPOP01588 193 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 PCNAP12004 261 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 TCF3P15923 654 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 MATN1P21941 496 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 MRPL19P49406 292 aaKnown RBP13.09□□□□□ -0.31
ACTN1-202ENST00000376839 HLCSP50747 726 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 PLIN5Q00G26 463 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 BNIP3Q12983 259 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 TRIP4Q15650 581 aaPredicted RBP13.09□□□□□ -0.31
ACTN1-202ENST00000376839 C10orf120Q5SQS8 335 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 CCNYL2Q5T2Q4 361 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 Q6ZSR9 355 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 ZNF554Q86TJ5 538 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 ITIH5Q86UX2 942 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 DTWD1Q8N5C7 304 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 MDGA1Q8NFP4 955 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 PAIP1Q9H074 479 aaKnown RBP13.09□□□□□ -0.31
ACTN1-202ENST00000376839 FBXO44Q9H4M3 255 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 FAIMQ9NVQ4 179 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 CHCHD3Q9NX63 227 aaKnown RBP13.09□□□□□ -0.31
ACTN1-202ENST00000376839 PKD2L2Q9NZM6 624 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 SUN2Q9UH99 717 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 PLXNA3P51805 1871 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 GBF1Q92538 1859 aa13.09□□□□□ -0.31
ACTN1-202ENST00000376839 FAM234BA2RU67 622 aa13.08□□□□□ -0.31
ACTN1-202ENST00000376839 STX16O14662 325 aa13.08□□□□□ -0.31
ACTN1-202ENST00000376839 KLK8O60259 260 aa13.08□□□□□ -0.31
ACTN1-202ENST00000376839 CHEK2O96017 543 aa13.08□□□□□ -0.31
ACTN1-202ENST00000376839 ENO2P09104 434 aaPredicted RBP13.08□□□□□ -0.31
ACTN1-202ENST00000376839 HMOX2P30519 316 aa13.08□□□□□ -0.31
ACTN1-202ENST00000376839 HTR6P50406 440 aa13.08□□□□□ -0.31
ACTN1-202ENST00000376839 GRIK2Q13002 908 aa13.08□□□□□ -0.31
ACTN1-202ENST00000376839 PTPRRQ15256 657 aa13.08□□□□□ -0.31
ACTN1-202ENST00000376839 FXNQ16595 210 aa13.08□□□□□ -0.31
ACTN1-202ENST00000376839 AASDHQ4L235 1098 aaPredicted RBP13.08□□□□□ -0.31
ACTN1-202ENST00000376839 GLYATQ6IB77 296 aa13.08□□□□□ -0.31
ACTN1-202ENST00000376839 PSAPL1Q6NUJ1 521 aa13.08□□□□□ -0.31
ACTN1-202ENST00000376839 GPRIN3Q6ZVF9 776 aa13.08□□□□□ -0.31
ACTN1-202ENST00000376839 GLT6D1Q7Z4J2 308 aa13.08□□□□□ -0.31
ACTN1-202ENST00000376839 ZFAND4Q86XD8 727 aa13.08□□□□□ -0.31
ACTN1-202ENST00000376839 RIMKLAQ8IXN7 391 aa13.08□□□□□ -0.31
ACTN1-202ENST00000376839 OR7D4Q8NG98 312 aa13.08□□□□□ -0.31
ACTN1-202ENST00000376839 EEF1AKMT1Q8WVE0 214 aa13.08□□□□□ -0.31
ACTN1-202ENST00000376839 UROC1Q96N76 676 aa13.08□□□□□ -0.31
ACTN1-202ENST00000376839 C1QTNF3Q9BXJ4 246 aa13.08□□□□□ -0.31
ACTN1-202ENST00000376839 LRRC3Q9BY71 257 aa13.08□□□□□ -0.31
ACTN1-202ENST00000376839 ZNF510Q9Y2H8 683 aa13.08□□□□□ -0.31
ACTN1-202ENST00000376839 PCDHGA11Q9Y5H2 935 aa13.08□□□□□ -0.31
ACTN1-202ENST00000376839 A0A0U1RQS6 177 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms