RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 WFDC5Q8TCV5 224 aa13.86□□□□□ -0.19
MSH5-202ENST00000375740 C3orf30Q96M34 536 aa13.86□□□□□ -0.19
MSH5-202ENST00000375740 NSUN5Q96P11 429 aaKnown RBP13.86□□□□□ -0.19
MSH5-202ENST00000375740 SLC30A3Q99726 388 aa13.86□□□□□ -0.19
MSH5-202ENST00000375740 DERL2Q9GZP9 239 aa13.86□□□□□ -0.19
MSH5-202ENST00000375740 CAAP1Q9H8G2 361 aa13.86□□□□□ -0.19
MSH5-202ENST00000375740 PLGRKTQ9HBL7 147 aa13.86□□□□□ -0.19
MSH5-202ENST00000375740 MID1IP1Q9NPA3 183 aa13.86□□□□□ -0.19
MSH5-202ENST00000375740 SPG21Q9NZD8 308 aa13.86□□□□□ -0.19
MSH5-202ENST00000375740 CEACAM7Q14002 265 aa13.86□□□□□ -0.19
MSH5-202ENST00000375740 FASTKQ14296 549 aaKnown RBP13.86□□□□□ -0.19
MSH5-202ENST00000375740 SQLEQ14534 574 aa13.86□□□□□ -0.19
MSH5-202ENST00000375740 AGKQ53H12 422 aa13.86□□□□□ -0.19
MSH5-202ENST00000375740 LARP4Q71RC2 724 aaKnown RBP eCLIP13.86□□□□□ -0.19
MSH5-202ENST00000375740 ZBTB46Q86UZ6 589 aa13.86□□□□□ -0.19
MSH5-202ENST00000375740 FAM156AQ8NDB6 213 aa13.86□□□□□ -0.19
MSH5-202ENST00000375740 OSBPL6Q9BZF3 934 aa13.86□□□□□ -0.19
MSH5-202ENST00000375740 SEMA6AQ9H2E6 1030 aa13.86□□□□□ -0.19
MSH5-202ENST00000375740 VPS51Q9UID3 782 aa13.86□□□□□ -0.19
MSH5-202ENST00000375740 RNF112Q9ULX5 631 aa13.86□□□□□ -0.19
MSH5-202ENST00000375740 ATP11BQ9Y2G3 1177 aa13.86□□□□□ -0.19
MSH5-202ENST00000375740 PCDHB9Q9Y5E1 797 aa13.86□□□□□ -0.19
MSH5-202ENST00000375740 CPQQ9Y646 472 aa13.86□□□□□ -0.19
MSH5-202ENST00000375740 GBF1Q92538 1859 aa13.85□□□□□ -0.19
MSH5-202ENST00000375740 LCHNA4D1U4 455 aa13.85□□□□□ -0.19
MSH5-202ENST00000375740 SUPT3HB4E1H0 165 aa13.85□□□□□ -0.19
MSH5-202ENST00000375740 K7ERQ8 282 aa13.85□□□□□ -0.19
MSH5-202ENST00000375740 PSMD12O00232 456 aaPredicted RBP13.85□□□□□ -0.19
MSH5-202ENST00000375740 CDC7O00311 574 aa13.85□□□□□ -0.19
MSH5-202ENST00000375740 PLOD2O00469 737 aa13.85□□□□□ -0.19
MSH5-202ENST00000375740 FBP2O00757 339 aa13.85□□□□□ -0.19
MSH5-202ENST00000375740 KERAO60938 352 aa13.85□□□□□ -0.19
MSH5-202ENST00000375740 PRAMEF12O95522 483 aa13.85□□□□□ -0.19
MSH5-202ENST00000375740 STAMBPO95630 424 aa13.85□□□□□ -0.19
MSH5-202ENST00000375740 PKMP14618 531 aaKnown RBP13.85□□□□□ -0.19
MSH5-202ENST00000375740 ZNF23P17027 643 aa13.85□□□□□ -0.19
MSH5-202ENST00000375740 CREB5Q02930 508 aa13.85□□□□□ -0.19
MSH5-202ENST00000375740 FLOT2Q14254 428 aa13.85□□□□□ -0.19
MSH5-202ENST00000375740 DDX53Q86TM3 631 aaKnown RBP13.85□□□□□ -0.19
MSH5-202ENST00000375740 SNX31Q8N9S9 440 aa13.85□□□□□ -0.19
MSH5-202ENST00000375740 HJURPQ8NCD3 748 aaPredicted RBP13.85□□□□□ -0.19
MSH5-202ENST00000375740 TRPC4APQ8TEL6 797 aa13.85□□□□□ -0.19
MSH5-202ENST00000375740 ALG14Q96F25 216 aa13.85□□□□□ -0.19
MSH5-202ENST00000375740 KLHL32Q96NJ5 620 aa13.85□□□□□ -0.19
MSH5-202ENST00000375740 IL21Q9HBE4 155 aa13.85□□□□□ -0.19
MSH5-202ENST00000375740 FBRSL1Q9HCM7 1045 aaKnown RBP13.85□□□□□ -0.19
MSH5-202ENST00000375740 TMEM39AQ9NV64 488 aa13.85□□□□□ -0.19
MSH5-202ENST00000375740 CCDC167Q9P0B6 97 aa13.85□□□□□ -0.19
MSH5-202ENST00000375740 TBX21Q9UL17 535 aa13.85□□□□□ -0.19
MSH5-202ENST00000375740 DNAJC15Q9Y5T4 150 aa13.85□□□□□ -0.19
MSH5-202ENST00000375740 OAS3Q9Y6K5 1087 aaKnown RBP13.85□□□□□ -0.19
MSH5-202ENST00000375740 PLXNA4Q9HCM2 1894 aa13.85□□□□□ -0.19
MSH5-202ENST00000375740 NIPSNAP2O75323 286 aa13.85□□□□□ -0.19
MSH5-202ENST00000375740 RNASEH2AO75792 299 aaKnown RBP13.85□□□□□ -0.19
MSH5-202ENST00000375740 LATS1O95835 1130 aa13.85□□□□□ -0.19
MSH5-202ENST00000375740 FGF4P08620 206 aa13.85□□□□□ -0.19
MSH5-202ENST00000375740 ALDH3B2P48448 385 aa13.85□□□□□ -0.19
MSH5-202ENST00000375740 ATP6V0D1P61421 351 aa13.85□□□□□ -0.19
MSH5-202ENST00000375740 TSNQ15631 228 aaKnown RBP13.85□□□□□ -0.19
MSH5-202ENST00000375740 FBXO48Q5FWF7 155 aa13.85□□□□□ -0.19
MSH5-202ENST00000375740 OGFOD2Q6N063 350 aa13.85□□□□□ -0.19
MSH5-202ENST00000375740 BHLHE22Q8NFJ8 381 aaPredicted RBP13.85□□□□□ -0.19
MSH5-202ENST00000375740 C19orf60Q96EN9 201 aa13.85□□□□□ -0.19
MSH5-202ENST00000375740 ASB2Q96Q27 587 aa13.85□□□□□ -0.19
MSH5-202ENST00000375740 EPS15L1Q9UBC2 864 aa13.85□□□□□ -0.19
MSH5-202ENST00000375740 ZNHIT2Q9UHR6 403 aa13.85□□□□□ -0.19
MSH5-202ENST00000375740 FUOMA2VDF0 154 aa13.84□□□□□ -0.19
MSH5-202ENST00000375740 HTR3EA5X5Y0 456 aa13.84□□□□□ -0.19
MSH5-202ENST00000375740 GFRA2O00451 464 aa13.84□□□□□ -0.19
MSH5-202ENST00000375740 TEX28O15482 410 aa13.84□□□□□ -0.19
MSH5-202ENST00000375740 FZD6O60353 706 aa13.84□□□□□ -0.19
MSH5-202ENST00000375740 CLASP2O75122 1294 aaKnown RBP13.84□□□□□ -0.19
MSH5-202ENST00000375740 ECI2O75521 394 aa13.84□□□□□ -0.19
MSH5-202ENST00000375740 FUCA1P04066 466 aa13.84□□□□□ -0.19
MSH5-202ENST00000375740 CTPS1P17812 591 aa13.84□□□□□ -0.19
MSH5-202ENST00000375740 PSMC3P17980 439 aa13.84□□□□□ -0.19
MSH5-202ENST00000375740 TCN1P20061 433 aaPredicted RBP13.84□□□□□ -0.19
MSH5-202ENST00000375740 EEF1DP29692 281 aaKnown RBP13.84□□□□□ -0.19
MSH5-202ENST00000375740 TTPAP49638 278 aa13.84□□□□□ -0.19
MSH5-202ENST00000375740 FOXA1P55317 472 aa13.84□□□□□ -0.19
MSH5-202ENST00000375740 CDH18Q13634 790 aa13.84□□□□□ -0.19
MSH5-202ENST00000375740 PTK2BQ14289 1009 aa13.84□□□□□ -0.19
MSH5-202ENST00000375740 CTSL3PQ5NE16 218 aa13.84□□□□□ -0.19
MSH5-202ENST00000375740 TMEM53Q6P2H8 277 aa13.84□□□□□ -0.19
MSH5-202ENST00000375740 Q6ZNB5 142 aa13.84□□□□□ -0.19
MSH5-202ENST00000375740 TAS2R42Q7RTR8 314 aa13.84□□□□□ -0.19
MSH5-202ENST00000375740 CHERPQ8IWX8 916 aaKnown RBP13.84□□□□□ -0.19
MSH5-202ENST00000375740 APCDD1Q8J025 514 aa13.84□□□□□ -0.19
MSH5-202ENST00000375740 FBXO39Q8N4B4 442 aa13.84□□□□□ -0.19
MSH5-202ENST00000375740 PCDH20Q8N6Y1 951 aaKnown RBP13.84□□□□□ -0.19
MSH5-202ENST00000375740 SIDT2Q8NBJ9 832 aaKnown RBP13.84□□□□□ -0.19
MSH5-202ENST00000375740 PAIP1Q9H074 479 aaKnown RBP13.84□□□□□ -0.19
MSH5-202ENST00000375740 MRPL17Q9NRX2 175 aaKnown RBP13.84□□□□□ -0.19
MSH5-202ENST00000375740 THEGQ9P2T0 379 aa13.84□□□□□ -0.19
MSH5-202ENST00000375740 TYW5A2RUC4 315 aaKnown RBP13.84□□□□□ -0.19
MSH5-202ENST00000375740 NPEPPSL1A6NEC2 478 aa13.84□□□□□ -0.19
MSH5-202ENST00000375740 AZIN1O14977 448 aa13.84□□□□□ -0.19
MSH5-202ENST00000375740 VPS26AO75436 327 aa13.84□□□□□ -0.19
MSH5-202ENST00000375740 ZNF26P17031 533 aaPredicted RBP13.84□□□□□ -0.19
MSH5-202ENST00000375740 ME2P23368 584 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms