RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 TUBA3EQ6PEY2 450 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.06□□□□□ -0.48
C9orf3-203ENST00000375315 GPRIN1Q7Z2K8 1008 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 FAM126BQ8IXS8 530 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 ATXN7L3BQ96GX2 97 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 ANKHQ9HCJ1 492 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 TRIM39Q9HCM9 518 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 ACSS2Q9NR19 701 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 ASNSD1Q9NWL6 643 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 TANC1Q9C0D5 1861 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 ZBBXA8MT70 800 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 SDHDO14521 159 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 ENDOD1O94919 500 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 POLR2CP19387 275 aaPredicted RBP12.06□□□□□ -0.48
C9orf3-203ENST00000375315 CDH5P33151 784 aaPredicted RBP12.06□□□□□ -0.48
C9orf3-203ENST00000375315 RFC2P35250 354 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 TKTL1P51854 596 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 CRADDP78560 199 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 SMAD1Q15797 465 aaKnown RBP12.06□□□□□ -0.48
C9orf3-203ENST00000375315 PITRM1Q5JRX3 1037 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 ATAD3CQ5T2N8 411 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 LCN8Q6JVE9 175 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 PAGE2Q7Z2X7 111 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 LRRTM3Q86VH5 581 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 ADGRG5Q8IZF4 528 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 C8orf59Q8N0T1 100 aaPredicted RBP12.06□□□□□ -0.48
C9orf3-203ENST00000375315 PELI3Q8N2H9 469 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 TOR1AIP2Q8NFQ8 470 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 SLC7A14Q8TBB6 771 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 JPH3Q8WXH2 748 aaPredicted RBP12.06□□□□□ -0.48
C9orf3-203ENST00000375315 PROX1Q92786 737 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 MOCOSQ96EN8 888 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 ZFYVE19Q96K21 471 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 LHX5Q9H2C1 402 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 TMEM39AQ9NV64 488 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 ADPRHL2Q9NX46 363 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 MTF2Q9Y483 593 aaPredicted RBP12.06□□□□□ -0.48
C9orf3-203ENST00000375315 MN1Q10571 1320 aaPredicted RBP12.05□□□□□ -0.48
C9orf3-203ENST00000375315 ENPP3O14638 875 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 POLR1CO15160 346 aaPredicted RBP12.05□□□□□ -0.48
C9orf3-203ENST00000375315 UBDO15205 165 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 ZW10O43264 779 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 TBX1O43435 398 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 HDCP19113 662 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 GPD1P21695 349 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 CYP2F1P24903 491 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 SDC4P31431 198 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 SHMT2P34897 504 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 SESN2P58004 480 aaPredicted RBP12.05□□□□□ -0.48
C9orf3-203ENST00000375315 TUSC3Q13454 348 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 DSC3Q14574 896 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 DUSP7Q16829 419 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 FAM171A1Q5VUB5 890 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 TMEM236Q5W0B7 351 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 PQLC3Q8N755 202 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 BEND7Q8N7W2 519 aaPredicted RBP12.05□□□□□ -0.48
C9orf3-203ENST00000375315 OR10T2Q8NGX3 314 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 SCAMP5Q8TAC9 235 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 NDNFQ8TB73 568 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 SLC35F5Q8WV83 523 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 ROPN1LQ96C74 230 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 RBBP8Q99708 897 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 ZNF717Q9BY31 904 aaPredicted RBP12.05□□□□□ -0.48
C9orf3-203ENST00000375315 TASP1Q9H6P5 420 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 ACTR3BQ9P1U1 418 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 PDE10AQ9Y233 779 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 PRRC2BQ5JSZ5 2229 aaKnown RBP12.05□□□□□ -0.48
C9orf3-203ENST00000375315 SNTNA6NMZ2 147 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 FADS2P1A8MWK0 482 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 ZNF99A8MXY4 864 aaPredicted RBP12.05□□□□□ -0.48
C9orf3-203ENST00000375315 NDST3O95803 873 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 GNRH1P01148 92 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 APOA1P02647 267 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 C2P06681 752 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 ERVK-10P10266 1014 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 RPL17P18621 184 aaKnown RBP12.05□□□□□ -0.48
C9orf3-203ENST00000375315 NUDT1P36639 197 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 LIMK2P53671 638 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 IRF9Q00978 393 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 SEMA5AQ13591 1074 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 GPNMBQ14956 572 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 CRY1Q16526 586 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 CYP51A1Q16850 503 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 PRMT9Q6P2P2 845 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 TRAF7Q6Q0C0 670 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 IDO2Q6ZQW0 420 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 PAQR9Q6ZVX9 377 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 CLEC14AQ86T13 490 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 TMEM173Q86WV6 379 aaPredicted RBP12.05□□□□□ -0.48
C9orf3-203ENST00000375315 METTL23Q86XA0 190 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 TBC1D21Q8IYX1 336 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 LGI2Q8N0V4 545 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 DEFB106AQ8N104 65 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 OR6F1Q8NGZ6 308 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 URGCPQ8TCY9 931 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 PEBP4Q96S96 227 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 ASPSCR1Q9BZE9 553 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 ULBP1Q9BZM6 244 aa12.05□□□□□ -0.48
C9orf3-203ENST00000375315 MKRN2Q9H000 416 aaKnown RBP12.05□□□□□ -0.48
C9orf3-203ENST00000375315 C12orf4Q9NQ89 552 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms